EMLSAT00000009698, EMLSAT00000009698-705545 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009698
Unique NameEMLSAT00000009698-705545
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s625supercontigLSalAtl2s625:166332..169749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009698 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009698EMLSAG00000009698-692464Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043008EMLSAE00000043008-751936Lepeophtheirus salmonisexon
EMLSAE00000043009EMLSAE00000043009-751937Lepeophtheirus salmonisexon
EMLSAE00000043010EMLSAE00000043010-751938Lepeophtheirus salmonisexon
EMLSAE00000043011EMLSAE00000043011-751939Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773706auto773706Lepeophtheirus salmonispolypeptide
EMLSAP00000009698EMLSAP00000009698Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009698

>EMLSAP00000009698 ID=EMLSAP00000009698|Name=EMLSAP00000009698|organism=Lepeophtheirus salmonis|type=polypeptide|length=336bp
MYISSHVYSEVIFAKRLYXRDECEVLEYDTCHKELAIVKGQPMLNHQLVL
PDCKXLPVIGTSGNYNCVRLGIPGVVQLIKPHGCYVGNGGDYRGTVSVTS
SGRTCKPWHLSSSGLSGNSVSNKELVLELVGGHNYCRNPGGKEEQPWCYT
NSPSRHMEPCGVPQCTXSSLWVYVAIPIAIAIGLTVIIILFVCFRRRGIM
HRKGGLSSSGSNSPRSLITLPSSQNCSSSEMEMNSLLPNRAPLGGSSAGS
QHSSTGPSNNTGSTNLSNNHLYQRPFAHLMSTQSNSLPPAGMVQMASGPN
GIPHTLLVGNPQNGGVHTNPSYQTTTAASIASLQMV
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mRNA from alignment at LSalAtl2s625:166332..169749-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009698-705545 ID=EMLSAT00000009698-705545|Name=EMLSAT00000009698|organism=Lepeophtheirus salmonis|type=mRNA|length=3418bp|location=Sequence derived from alignment at LSalAtl2s625:166332..169749- (Lepeophtheirus salmonis)
ATGTACATAAGTAGTCATGTATATTCTGAAGTTATCTTTGCTAAGCGTTT
GTAAAGAAACACTTGGCTTATACTGTCTAAAGAGTCTACAAAATATCCTA
CTTTGATGATAAAATGAGAAAACCCTCTTCTAACAACATTTTAAGATACT
TTTAGCAAAAGCAACAATAAACTATAACTCATAAATGTTTTTAATCACAG
ATATGNCCGGGATGAATGTGAAGTCTTAGAGTATGATACATGCCATAAAG
AGCTCGCCATTGTCAAGGGGCAACCCATGCTCAACCATCAACTCGTACTC
CCAGACTGCAAAGKACTCCCTGTCATCGGAACATCCGGAAATTACAATTG
TGTTCGTTTAGGTATTCCAGGGGTAGTTCAACTCATAAAGCCTCATGGAT
GCTACGTGGGAAATGGAGGAGACTATCGAGGAACAGTCTCTGTGACTTCA
TCTGGACGTACATGCAAACCCTGGCATTTGAGCTCAAGTGGTTTGAGTGG
GAACAGTGTGTCGAATAAAGAGCTCGTTTTAGAGCTTGTTGGTGGTCATA
ATTATTGCCGAAATCCAGGAGGAAAAGAAGAGCAGCCCTGGTGTTATACA
AATAGTCCATCGTAAGTTCACTCCTTGTACTTAGCACTAGTTTTGTTTTT
GCTTGAATCGAACCAAATTGTGTCGATTCCATAAGGATCGNCCTGAGCCG
ATAAATTAAAAAGAGAATACATTAAGGAGCCACTCATGTACCCTGCCCAT
TTATTAATTTAAATTTAWTAAAGWAKTTTCTTATTACTTGTCTACGTTTC
TCCTGCTATTGCGGCGAATTTTTATATTTGCTGTATGAGGTTTAATAAGC
AAATATTTTTGCATCACTCTGATATAGTGCAATTTGCTACAAACCCCTGG
TATATTAATATCTAATCTGTCTCCTCAGAGATTAGAAGAATCCCATAAGA
AATTTTGATTAATAGGGCATAGTATATAATCCATCAGGTGGTGTGACAGT
CTGTACCTTGTTCTTTTCAAATAATACTATAAATCAGGGAGTTTTTTGTT
TTACCCCTAGGCGGCGTCACAATTTGTCGCTTTGTCTACAAACTAATATA
AGTAAACGACGCTCATTTGAAAATAATTTTAAAATTTGATGAGGTTTAGT
GATATAAATCAAGTAGACTAAATACAATATAAAGTTGGCTTGGTTTTTTC
CCCGTGTTTTGATAATCGACTCACTATCTAAATCCAGTCGAAATATAATT
GACTCATGTCGAGCCAAGACAAAACTACTTACTACAAAAACGTATGAAAC
CCCCTACCCTTTGTTCATCTCGAAAAAAGGGAGATTTTCCTTCTATCACA
TTTGAAATAATGATTGTACTATTTTTTTTTTTTTTAGAATCCCTCCTTCC
TAAGGAGGAAATATCATTACTCATTGTCATTTCTTAATGGTGTTTTTCGT
CATTCAAATTCATAGTCGTATGCGTTGTTGTTTAATTATGCAAAATAAAA
CAAAATACATTCTTAAGCTAGAGAGGGAAAGAAAAATTCAATTTGTTGAG
AAAAAACTTTTTAAATTAGTTTTTAAAAAAAATACGAATACAAACTAAGA
CTTTATATTATAGCTACATATGCTTTACATAAAAAGATATACAAAATATA
ATGATGATTATCGTAATATGTCACACCTGCTCAAAACAAACTATTAATAT
TACTCATAAAAAGTTGAATTGAACAAATGAGAAAAACATTTGAAAGGAGG
GATAGAGAATTGAATAAGATGAGTTTTTAAAAAACTATTTGAACAGTACA
ATTGAAAACAATCATTTATCTTGTGATTCTTATTTATTTAACTTTCCTTT
ACAGTACACACATAGATTACCAACATTTAAATGAATGTATTTTATTTTTC
AGACGTCATATGGAGCCCTGCGGTGTACCTCAATGTACTGKCTCCAGTCT
ATGGGTCTATGTCGCAATACCCATTGCTATAGCAATCGGTCTTACTGTCA
TCATAATACTCTTTGTCTGCTTTAGACGACGTGGAATCATGCATCGTAAA
GGTGGCCTTTCGTCTTCTGGCTCCAATTCTCCACGATCACTCATTACTTT
GCCATCTTCACAAAATTGCAGCTCTTCAGAAATGGAAATGAACTCCCTTC
TACCCAATAGAGCTCCTCTTGGAGGATCCTCTGCGTCCTCATCCTCAACA
ACAAATCCAGCCTTCTCCATTGGACCCTCAAAAATAACAGCTCGTGAATT
TCCTATAACGAGTATTCGATTCATTCAAGAGCTTGGAGATGGAGCCTTTG
GTAAAGTGTATCGTGGGGATTTGGGCGGTATTGTTGGAGGTTGCACCACG
TCTGTTGCAATCAAGACTCTTCGTCAAGGAGCCAACACAAAAACAAAACA
AGATTTCCAACGAGAAATTGATCTCTGTACTAACTTAAAGCATCCTAATA
TTGTGTGTCTCCTAGGAGTTATTCTCAAGGATGAACCTCAGTGCTTAATA
TTTGAGTTTTTAATCAAAGGGGACCTTCATGAATTTTTAGTGACTCATAG
CCCTAAATCCGGAGATCTAGATGGAGGAGGTCTAGATCCCAGTGATATGT
CATTCATTGCAATACAGATTTCAGGTGGACTAGAGTATCTTAGTTCTCAT
CACTATGTTCATCGAGATATTGCAACGAGAAACTGCCTCGTGGGAGATAA
TCTCTCCATCAAAATTTCAGACTTTGGGTTAGCCAGAGACATTTACGCAT
CAGATTATTATAGAGTACAAACTAAATCCCTTCTTCCTGTTCGATGGATG
CCTCCAGAGAGTATTTTATACGGTAAATTTGCAGCAGAGTCTGACGTATG
GTCATTTGGTGTATTATTGTGGGAAATCTATAGCTATGGACTGCAGCCCT
ATTACGGATATAGTAATACAGAAGTTATAGAAATGATTCGCTCACGACAA
CTCCTACCTTGTCCAGAGGACTGTTCATCACGCATGTACGCTTTTATGGT
AGAATGTTGGCATGAAATGCCCTCTCGCCGACCTACTTTCCATGAAATAC
ATGCAAGACTTCGTCAATGGGAAGGCATGAGTGGTCATTCAAATCTTTCA
GGAGGGTATCAAAGCGCAGCGCACAGTATTTGTGATACCTCTCAACACAG
TGGCTCTCAACACTCCTCTACGGGTCCATCGAACAATACTGGCTCTACTA
ACCTCAGTAATAACCATTTATATCAAAGACCTTTTGCACATTTGATGAGC
ACGCAGTCCAATTCCTTACCCCCTGCTGGAATGGTTCAAATGGCAAGCGG
ACCAAATGGAATTCCCCATACCCTTTTAGTTGGAAATCCTCAGAACGGGG
GTGTACACACAAATCCAAGTTATCAAACGACCACTGCTGCGAGCATTGCA
TCTTTACAAATGGTGTAA
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