EMLSAT00000009745, EMLSAT00000009745-705592 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009745
Unique NameEMLSAT00000009745-705592
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s628supercontigLSalAtl2s628:34060..36359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009745 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009745EMLSAG00000009745-692511Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043243EMLSAE00000043243-752171Lepeophtheirus salmonisexon
EMLSAE00000043244EMLSAE00000043244-752172Lepeophtheirus salmonisexon
EMLSAE00000043245EMLSAE00000043245-752173Lepeophtheirus salmonisexon
EMLSAE00000043246EMLSAE00000043246-752174Lepeophtheirus salmonisexon
EMLSAE00000043247EMLSAE00000043247-752175Lepeophtheirus salmonisexon
EMLSAE00000043248EMLSAE00000043248-752176Lepeophtheirus salmonisexon
EMLSAE00000043249EMLSAE00000043249-752177Lepeophtheirus salmonisexon
EMLSAE00000043250EMLSAE00000043250-752178Lepeophtheirus salmonisexon
EMLSAE00000043251EMLSAE00000043251-752179Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770036auto770036Lepeophtheirus salmonispolypeptide
EMLSAP00000009745EMLSAP00000009745Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009745

>EMLSAP00000009745 ID=EMLSAP00000009745|Name=EMLSAP00000009745|organism=Lepeophtheirus salmonis|type=polypeptide|length=598bp
MNILIQSRVQRYFSNLRRRRRRINSSLDHHVRFSFQALESPHECFRSMNH
RSFFVGYLSEANISREDSNVIYNFFINRSSVKGTKELPIGNTNLTSYISE
QRKNYNGENTPEIDLDCEKWDFYNSFVFTFTASTTIGYGQLSPVTAQGKL
LCIFYSLIGIPINGILIGSLGSYFAAKLEAFQDSGDDSDSDDELKKKGEL
FKFCSIMFNIIIYLIPGVAVFVLIPALIFHYIEGWSYLDSVYYAYITLTT
IGFGDFAAGRNNDILRSLDSWSLIYESFILIWIMFGLGYIFMIITIITDG
IRKPVRRAVKKIERSFLKRIIEEVVNKRNKEYEKNGSMDGLTLENHDKDL
VMENDLYLSVNDMEDDDKAHLEFKNKLVEDKEEDNEDPFEHNRDTIKSLQ
HFFENNKKFNMDHPSPKLRNTSTSSLNLRKERRAVSMQHPPDMISNSGSN
ISIQKKRRISSYVDERSRPRSTYGSDFKPSITDMSFSEFLKNTTLEEFFV
AANSISSPRNSVHNDPNVSSANSPQNSIHTGMKKLSTMASSGLEPFSKLF
SNGTTHGTSQRRASSFSTSNRVSEPPTQIIVTSYSSASSESKDNEIRI
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mRNA from alignment at LSalAtl2s628:34060..36359-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009745-705592 ID=EMLSAT00000009745-705592|Name=EMLSAT00000009745|organism=Lepeophtheirus salmonis|type=mRNA|length=2300bp|location=Sequence derived from alignment at LSalAtl2s628:34060..36359- (Lepeophtheirus salmonis)
ATGAATATACTTATTCAATCTCGAGTTCAAAGATATTTTTCGAATCTGCG
TCGACGTAGAAGACGCATTAATTCCTCCTTAGATCATCATGTCAGTTAGA
AATTGGTTTCTCATTCTTTTTCTATATATTTTATATCTTCTTATTGGAGG
ATTTAGCTTTCAAGCCCTTGAATCTCCTCATGAATGCTTTCGGAGTATGA
ACCATCGCTCTTTCTTTGTTGGCTATTTGTCAGAAGGTACATAGAAATGA
TTGTGTGCCATTGAACTCCTAATTTGATCTTACTGTTTTTACTAGCCAAC
ATATCCAGAGAAGACTCAAATGTGATTTATAATTTCTTTATAAATCGCTC
CTCAGTTAAAGGAACAAAGGAGTTGCCTATTGGTAATACAAATCTCACTT
CATACATTTCCGAACAAAGAAAAAATTACAATGGAGAGAATACTCCTGAA
ATCGACTTGGACTGTGAGAAATGGGACTTCTATAATTCCTTTGTTTTTAC
TTTTACTGCGTCGACTACCATAGGTACGAGTTCATAATTTATAATATCAT
GTTATTTTGTTATTTTGAATTTCAAAGGCTATGGGCAACTTTCTCCGGTT
ACAGCGCAAGGTAAATTGCTATGCATATTCTACTCCTTGATTGGTATACC
CATTAATGGTATACTCATTGGATCTTTAGGAAGCTATTTTGCTGCTAAGG
TAATTATTTTCTCAAATTAGGAAATGTGAATCTAACATTATAATTCATGT
TTTAGTTGGAAGCCTTTCAAGATAGTGGAGATGACTCCGATAGTGATGAT
GAATTAAAAAAGAAAGGGGAACTCTTCAAATTCTGCTCAATTATGTTTAA
TATCATTATTTATCTCATACCAGGAGTTGCAGTGTTTGTTCTTATTCCTG
CATTGATATTTCATTATATTGAAGGGTGGTCATATCTCGATTCTGTATAT
TACGCTTATATAACTTTAACTACGATCGGGTTCGGAGATTTCGCTGCAGG
TACACTTTTACTAAATTCTAACGTCTAGTTGTGTACATTCATCAGTTTTT
TCTAGGGAGAAATAACGATATCCTTCGTAGTTTAGATTCTTGGTCTCTAA
TTTATGAATCATTTATTTTGATCTGGATCATGTTTGGACTCGGATACATA
TTCATGATCATCACTATTATCACTGACGGCATTCGTAAACCAGTTCGAAG
AGCTGTCAAAAAAATTGAAAGATCATTTCTCAAAAGAATAATTGAGGAAG
TTGTTAATAAACGGAATAAGGTACTTATCACTATCATCTTATAAATGTAA
CTAAAAAAATTTTTATTAAATGTTATTCTAATGAAGGAGTATGAAAAAAA
TGGATCTATGGATGGMCTAACACTTGAAAACCACGATAAGGATTTAGTGA
TGGAAAATGATTTGTATCTTAGTGTAAATGATATGGAAGATGATGATAAA
GCTCATTTAGAATTCAAAAATAAATTGGTAGAAGATAAAGAAGAGGATAA
CGAAGATCCGTTCGAACATAATAGAGATACAATCAAATCCCTTCAACACT
TTTTTGAAAATAACAAGAAATTTAATATGGATCACCCTTCCCCTAAATTA
AGGAATACTAGTACTTCATCTCTTAATCTAAGAAAGGAAAGAAGAGCTGT
GTCCATGCAGCATCCTCCCGATATGATATCTAATTCTGGTTCTAATATTT
CAATTCAAAAGAAGCGAAGGATTTCATCATATGTCGATGAAAGGTCACGT
CCACGAAGTAATTTATTTTTCTTCTTTCTTAATTACATTTATGTAGTATA
AATATTAATTTGATAATTAATCAATTATTTTTAATTGTTTTGTAGGCACC
TATGGTTCAGATTTTAAACCATCTATCACTGACATGAGTTTCTCCGAATT
CTTAAAAAATACGACATTAGAGGAATTCTTTGTGGCTGCGAGTATGATTT
AATATTCATGGACAAGTTTTTTGATAATAAATTATGTTATATACATATTT
TTTGTTTCAGATTCTATTTCAAGTCCTAGAAATAGTGTTCACAACGATCC
AAATGTTTCGTCAGCAAATTCTCCACAAAATTCAATTCATACTGGTATGA
AAAAACTATCCACCATGGCTTCATCTGGCCTTGAGCCTTTCTCAAAATTG
TTTTCCAATGGTACAACTCATGGCACTAGCCAACGCAGGGCGTCTTCTTT
CAGTACAAGCAATCGTGTTTCTGAGCCTCCGACACAGATTATTGTTACTT
CGTATTCTTCCGCATCTTCTGAAAGCAAAGATAATGAAATTAGAATTTGA
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