EMLSAT00000009773, EMLSAT00000009773-705620 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009773
Unique NameEMLSAT00000009773-705620
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s633supercontigLSalAtl2s633:192106..194271 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009773 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009773EMLSAG00000009773-692539Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043377EMLSAE00000043377-752305Lepeophtheirus salmonisexon
EMLSAE00000043378EMLSAE00000043378-752306Lepeophtheirus salmonisexon
EMLSAE00000043379EMLSAE00000043379-752307Lepeophtheirus salmonisexon
EMLSAE00000043380EMLSAE00000043380-752308Lepeophtheirus salmonisexon
EMLSAE00000043381EMLSAE00000043381-752309Lepeophtheirus salmonisexon
EMLSAE00000043382EMLSAE00000043382-752310Lepeophtheirus salmonisexon
EMLSAE00000043383EMLSAE00000043383-752311Lepeophtheirus salmonisexon
EMLSAE00000043384EMLSAE00000043384-752312Lepeophtheirus salmonisexon
EMLSAE00000043385EMLSAE00000043385-752313Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774219auto774219Lepeophtheirus salmonispolypeptide
EMLSAP00000009773EMLSAP00000009773Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009773

>EMLSAP00000009773 ID=EMLSAP00000009773|Name=EMLSAP00000009773|organism=Lepeophtheirus salmonis|type=polypeptide|length=549bp
MDTESSREDVIKKSKNNVLDPEFLMDSVGSWNKYQFFQNFIFCIIVIFFT
YSHYLPILYLYVPEHHCLISGGEEWNLTQKDLKAIFIPIIKNESHYEKCI
QYDVDVIEILEIGVRETNTSWPTIQCKNGWHYELDNYFNSFDFVCDDSWK
GPLTDTVYFIGSALGMLIYGWIGDHLGRYWTIMICNWSVCIFGIGLGFSP
NYIVYTIIRFFMGISTVTSLTSFFVLTIEWVSKSKRAFMGNFCIGFATAI
CGVIMPSLFYALKDWRLVNHAMHAQMLLTFLLPFLIHESVRWLLERRKFT
KASDILEKVAKFNGKELDKNIISELKSQESIESEESNKAVRKEXTSILEL
FKTPRLRRHILTMIVLWYQFILYFCPFLFSLEFPADIVIIFSMELLGRRW
TTLISMVLSGIPMFVAAYFEAFGGDAVIIMVLSMIGRFCSSMGVNVVMQF
KYEICPTDLRGRGSGLMLFVGALLSFIAPYIVYSSNIYSILPYIIVGTGG
LTVGFLALTXPETAGIELSTNAKEGEEFGRNQSFFYVPFIENLKKKREV
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mRNA from alignment at LSalAtl2s633:192106..194271-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009773-705620 ID=EMLSAT00000009773-705620|Name=EMLSAT00000009773|organism=Lepeophtheirus salmonis|type=mRNA|length=2166bp|location=Sequence derived from alignment at LSalAtl2s633:192106..194271- (Lepeophtheirus salmonis)
ATGGATACAGAATCATCTAGAGAAGACGTCATCAAAAAATCGAAAAATAA
TGTTTTGGATCCAGAATTTCTCATGGACTCTGTCGGAAGCTGGAATAAAT
ATCAGTTTTTCCAAAATTTTATTTTTTGTATTATTGTGATTTTCTTCACC
TATAGTCATTATCTTCCTATTCTTTATTTATACGTTCCGGAACATCACTG
CTTGATATCCGGAGGAGGTACAGTATAGTACCATCAACTAAAATCAATTT
TTAAATTTATGAGATTCAATTTCAGAGGAATGGAATTTGACTCAAAAAGA
CTTAAAGGCCATTTTCATTCCAATTATCAAAAATGAGTCTCATTACGAAA
AATGTATTCAGTATGATGTGGATGTGATCGAGGTAAGAGATTGAGCAATG
TTAAATTTCGAATTAATGAATAAAATAAATTTAGATTCTTGAGATTGGAG
TTCGAGAAACAAATACTAGTTGGCCCACGATTCAATGCAAAAATGGATGG
CATTACGAGCTGGATAATTACTTTAATTCTGTGGCTTNAGAGGKAGACAT
ATTAGGATACTAAAAATATATTCAGTTCTAAAGGTAATTCTTTGGAGTTT
GATTTTGTATGTGATGATTCCTGGAAAGGACCACTAACAGATACAGTTTA
CTTTATTGGATCAGCACTGGGAATGTTGATTTATGGATGGATTGGAGATC
ATTTAGGACGATACTGGACTATAATGATTTGCAATTGGAGTGTGTGTATT
TTTGGGATTGGGTTGGGATTTTCACCAAATTATATTGTTTATACTATCAT
TCGTTTTTTTATGGGGATTTCTACGGTGACATCCTTAACTTCTTTCTTTG
TTCTAAGTATTATATATATATATATATATGTATATTATTTAAAATACATA
AATTTATATAACTAATTATAGCAATAGAATGGGTTTCAAAATCAAAAAGG
GCATTTATGGGCAACTTTTGTATAGGATTCGCAACTGCAATATGTGGTGT
TATCATGCCTTCATTGTTTTATGCCTTGAAAGATTGGAGACTTGTGAATC
ATGCCATGCATGCACAAATGTTATTGACATTTCTTTTACCATTGTGAGTA
TGGATCCACGATTTATTTGTGCCTTTTCAGCTCTAACTTCATTGTATCAA
TTTCAGTTTGATCCATGAATCTGTACGATGGCTCCTAGAACGTAGAAAGT
TCACTAAAGCGAGTGATATCCTTGAGAAAGTGGCTAAATTCAATGGCAAA
GAATTGGACAAAAACATTATCAGCGAACTCAAAGTAAGATTTTTCCTACA
TTTTATTGAGACACGAAACATATTTTATTTTATTATGAAATAGAGCCAAG
AATCTATAGAATCAGAAGAGAGTAATAAGGCTGTAAGAAAAGAAKTAACC
AGTATTTTGGAATTGTTTAAAACTCCAAGACTACGTAGACATATCCTCAC
AATGATTGTTCTTTGGTATCAATTTATTTTGTATGTTTATTTTCATTCCC
GATCCATATCATTGCAATACATATAGGNNGATTATTAATAATATCAACAT
CCATATCTACTATAGTTTTGTCCATTTCTGTTTTCCTTGGAATTTCCAGC
GGATATAGTTATTATATTTTCAATGGAACTTCTAGGAAGAAGGTGGACAA
CTCTTATTTCAATGGTTTTATCAGGGATTCCAATGTTTGTTGCTGCCTAT
TTTGAGGGTATATATATATTTTTTTTTTTCTATTCGTCTATTAATTGTGC
TTACTTCAATTTTTTTTTTTTAAATAGCTTTTGGAGGAGATGCAGTGATT
ATAATGGTGCTGAGTATGATAGGAAGATTTTGTAGTTCCATGGGTGTTAA
TGTCGTAATGCAGTTTAAATATGAAATTTGTCCAACGGATTTAAGAGGAC
GTGGTTCGGGTTTAATGCTATTTGTTGGTGCTCTTTTGTCATTCATTGCT
CCATATATAGTCTACTCTTCAAACATTTATAGTATTTTACCATATATTAT
TGTGGGTACTGGAGGRTTAACGGTTGGRTTTTTGGCGTTGACATTMCCTG
AAACTGCTGGAATTGAACTGTCCACTAATGCGAAAGAAGGAGAAGAATTT
GGACGTAATCAGAGCTTCTTTTATGTACCTTTTATTGAGAATTTAAAGAA
GAAAAGAGAGGTTTGA
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