|
Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR005828 | General substrate transporter | PFAM | PF00083 | Sugar_tr | coord: 157..367 e-value: 5.0E-20 score: 71.3 |
None | No IPR available | GENE3D | 1.20.1250.20 | | coord: 40..81 e-value: 3.0E-16 score: 58.8 coord: 151..296 e-value: 3.0E-16 score: 58.8 coord: 382..514 e-value: 5.4E-8 score: 31.8 |
None | No IPR available | PANTHER | PTHR24064 | FAMILY NOT NAMED | coord: 21..535 |
None | No IPR available | TMHMM | TMhelix | | coord: 363..385 |
None | No IPR available | TMHMM | TMhelix | | coord: 426..448 |
None | No IPR available | TMHMM | TMhelix | | coord: 463..482 |
None | No IPR available | TMHMM | TMhelix | | coord: 40..62 |
None | No IPR available | TMHMM | TMhelix | | coord: 180..202 |
None | No IPR available | TMHMM | TMhelix | | coord: 206..228 |
None | No IPR available | TMHMM | TMhelix | | coord: 240..262 |
None | No IPR available | TMHMM | TMhelix | | coord: 487..509 |
None | No IPR available | TMHMM | TMhelix | | coord: 272..294 |
None | No IPR available | TMHMM | TMhelix | | coord: 400..419 |
None | No IPR available | TMHMM | TMhelix | | coord: 156..173 |
IPR005829 | Sugar transporter, conserved site | PROSITE | PS00216 | SUGAR_TRANSPORT_1 | coord: 389..405 |
IPR020846 | Major facilitator superfamily domain | PROSITE | PS50850 | MFS | coord: 106..514 score: 10.591 |
IPR016196 | Major facilitator superfamily domain, general substrate transporter | SUPERFAMILY | 103473 | MFS general substrate transporter | coord: 338..520 coord: 154..301 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000009773 ID=EMLSAP00000009773|Name=EMLSAP00000009773|organism=Lepeophtheirus salmonis|type=polypeptide|length=549bp MDTESSREDVIKKSKNNVLDPEFLMDSVGSWNKYQFFQNFIFCIIVIFFT YSHYLPILYLYVPEHHCLISGGEEWNLTQKDLKAIFIPIIKNESHYEKCI QYDVDVIEILEIGVRETNTSWPTIQCKNGWHYELDNYFNSFDFVCDDSWK GPLTDTVYFIGSALGMLIYGWIGDHLGRYWTIMICNWSVCIFGIGLGFSP NYIVYTIIRFFMGISTVTSLTSFFVLTIEWVSKSKRAFMGNFCIGFATAI CGVIMPSLFYALKDWRLVNHAMHAQMLLTFLLPFLIHESVRWLLERRKFT KASDILEKVAKFNGKELDKNIISELKSQESIESEESNKAVRKEXTSILEL FKTPRLRRHILTMIVLWYQFILYFCPFLFSLEFPADIVIIFSMELLGRRW TTLISMVLSGIPMFVAAYFEAFGGDAVIIMVLSMIGRFCSSMGVNVVMQF KYEICPTDLRGRGSGLMLFVGALLSFIAPYIVYSSNIYSILPYIIVGTGG LTVGFLALTXPETAGIELSTNAKEGEEFGRNQSFFYVPFIENLKKKREV back to top
|