EMLSAT00000009796, EMLSAT00000009796-705643 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009796
Unique NameEMLSAT00000009796-705643
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s638supercontigLSalAtl2s638:23384..28063 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009796 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009796EMLSAG00000009796-692562Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043490EMLSAE00000043490-752418Lepeophtheirus salmonisexon
EMLSAE00000043491EMLSAE00000043491-752419Lepeophtheirus salmonisexon
EMLSAE00000043492EMLSAE00000043492-752420Lepeophtheirus salmonisexon
EMLSAE00000043493EMLSAE00000043493-752421Lepeophtheirus salmonisexon
EMLSAE00000043494EMLSAE00000043494-752422Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769581auto769581Lepeophtheirus salmonispolypeptide
EMLSAP00000009796EMLSAP00000009796Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009796

>EMLSAP00000009796 ID=EMLSAP00000009796|Name=EMLSAP00000009796|organism=Lepeophtheirus salmonis|type=polypeptide|length=405bp
MRKKSKCDKGRSNGPDLNGEIMSPGEFKIRLDALCSWVEDCNEYQKDAIL
RTLFPHLGASQLHWLSLQCPDLHAQCPSGCNDFIQKLPIHCAYKXLSYLD
PSSLTASAQVCKYWRDLSNADWLWHRLCFIQKWRLSSFGSRDQITRLRQR
SNTGDMLINWKHVFRERFKLRRSWLSGQCHVRTFEGHTGGISCIQLDRNR
IVSGSHDKTIRVWNIKTNSPWSVMTLSGHSGEVRCLYLEGNRLVSGSADS
TIKVWDLDIQSEWSSIACKVTMVGHLDKVRAVTMNRNKDLVISGSYDQTV
KIWCLKTGSCKRTLRGHEGPVLCVHWAGFTLLSGSADKTIKQWSVETGEC
IRTLTGHGDAVTCISLETDRIVTGSLDRTIKLWDSKTGKCVSTLDWMSSE
GHTGY
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mRNA from alignment at LSalAtl2s638:23384..28063-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009796-705643 ID=EMLSAT00000009796-705643|Name=EMLSAT00000009796|organism=Lepeophtheirus salmonis|type=mRNA|length=4680bp|location=Sequence derived from alignment at LSalAtl2s638:23384..28063- (Lepeophtheirus salmonis)
AACAGAAGAAGACAGTTCATGAGAAAGAAATCTAAATGTGACAAAGGAAG
AAGCAACGGGCCCGACTTAAATGGGGAAATCATGAGTCCTGGAGAGTTTA
AAATTCGTTTGGATGCACTTTGTTCATGGGTCGAGGATTGCAACGAATAT
CAAAAAGATGCGATACTCCGGACTCTTTTTGTATGAGTATATTTTTTTAT
TAATCATTTGACAACTGCTTTGATAATGAGTTTATGTTATAAATATTTTC
CTGATTTGAGAGGGTTTTTGATATTGAGTCAAACCCGGCTAAGTGCATCT
CCTGAGTTATAATAAAAGTGCTGCTCATCATATTCGAACTAAAGAAATAA
AATTAATGTTTTGTGTACTTTACTAACACACAAATATACAGTGTATTTCG
TTGTCAGCTGTCGATGTGTTTGCTTCTTCTCTCCTAATCAGTATTTTGAA
CTTTGATTGGCTCAATTAGAATTAGATCATTTTAAACTCTTAACAATTTC
CAATGATAATTCTATATAATTGGGAAGAACTGGCTAACTTCTATCAACTG
ATTTTGGGCCTTTTCTATAAGGAAAGATTGCCTAATACAATACAGCAAAG
GACCTGTTAACCCTTGTATTATGTTTAGGGTCAATTTGATCCGTTTCAGA
GTTTATATATTGGCCAAAATATTGGTTATCCTCTTTTTTTTCTTACTGAA
TTTTTTCTACGTCTCCTCATTTAGGGTCAAGTACTACCTTGCAAAATTAG
AAAACACAGGCCTGTTGCACCACTTTGACTTAAATTTAAATTATGCCTGC
ATGAAGTCACTTCATTTAATTAGCCTTTAATTTAAGTTGAGTTGTTTGTC
TATAAAAAAAAAATTATGAGTCATATTGACACGGAATCGTCATATGGTGT
GCATTTATATCTCAAATAAACTATGATTTTTTAAGTCTCAGAATAGTTTG
TTTTATTGTTTGACTATCAATCTAGTTCAGGGATCAACATGTGTGTTGAT
GAGTAACTTATATTTACTTTTATTTGTCACTTTTCGTTTTATATTTTTCT
CGTACGCACCAATGATGTGCTCTTAAAGGTTTTCAGTTGAAGAAACTGTA
GCACAAGTTTGGATCACCGATATTGATGCAGAGAAGGAGATTTCAGAGGT
AAAAGATCTTTCAGAGCCTAAAAATAATTTCCTTTTTTTATTTTTTATTA
TGTGGATTTTAGTTTACGAGTCCAAATCAATGTAATTTGTTTTCAATCTA
ATACGAAGGATACGTACATCGGTGACCGGCACAAGACAATTTGCAATCAA
TTTCAAAGGACATTTATTCCATAGTGTCAGTTATTATTATTTTTTAACTA
AGGAAGATAAATTACTATTTTCTACAATTTCTTCAATTTTGGGATTGTCA
AGCCCATAATCATAATAATAAAATTTTCATATGAGATATGAAAAGAAAAA
GGGCCAATGGAATTTAAAAAATATTTGTATCCTTCTATCTGTGAATATTT
TAATGTAGAAATTACGGCTAAAAGTTGCACATATCTGTATTGTTTTTAGC
AGGTTATTGCGAAGTAGTTTGTAGAACAAAACATTTTTATCTGAGGAAAA
GTTCTTATTAGGGAATTTTTTATCTTTTAGATTCCGTTAACTGCACATGT
AGGGGCTGCCCCACTTTTTTAAAGTGTACAATTATCATATATGAGGGGGG
GGGGAAATTGCAGTTATTGGCCTTTTCCACTTTCAAAAACGATGTGCGGA
GTATAATTGTTTGATTGTCCGTATATTGGAGTTTATTTATGACAAAACCT
CTTAAATGAGTTACGTTCAGTTTATAATTCAAATGATATTATTTTAATGA
TTGACGTGCTATTTGTAAGATATCGAAGTGTTAAATACATACATCTCGAT
TACATTAATCAATTAACAGAAACTAGACCTAATAACACTCCATTCTAATA
ATAAGGTTGATTATAATTAGTGTTATATCAGTCCTATTTATTCAGTCCAG
TTTTAGTACTGGTCCTTCAGACTGTCAGAACTATAACTGATTAAAGTAAG
AATAAATATATTGCAGTGACGTCATCAAGGACGATACTTCATAAGTTTTA
GGATGTATGCATAGGAATGAACTGGATAGGACTGCAGTTCTAAATAAGGA
CTGACACAGCACCAATTATAATATCCTCACTTGTATGTTGTTGCTTTTCG
GTTATATATTTGATTGTAATCTTGATATTGTAACATTTGTTTTTCATTTT
TGTATCCCCTACTCCGTAAAATGATTAATTTTATGTACACATATGTACTT
ATTTACTTAGCATAAAACATTACCTATTACTCATACACACTTTTTTCAAA
ACGTTCCCTCAAGTTGAAAGGATGTCAAAGCAGTTGTTACCCTATTTACA
TTATATATCATAATATGTACTCATTATAATATCATTTTTGACTTTCCCCC
TTGCTTCAGCCTCATTTAGGAGCATCCCAGCTTCATTGGCTAAGTCTTCA
ATGCCCAGATCTTCATGCTCAATGTCCTTCAGGATGTAATGATTTCATCC
AAAAACTTCCTATTCATTGCGCCTATAAAATKCTCTCGTACCTGGATCCG
TCTTCCCTAACTGCCTCTGCTCGTAGGTTACTTATCACTCTTTTGTAGAT
TTGACTTATTATATTTTCTTGATACTACTTATAGAGGTGTGTAAATATTG
GAGAGATTTGAGTAATGCGGACTGGCTTTGGCATAGACTTTGCTTCATAC
AAAAATGGAGATTATCCTCTTTTGGCTCAAGAGATCAAATTACTCGACTG
CGGCAACGATCAAATACCGGAGACATGCTGATTAATTGGAAACACGTTTT
TAGAGAGAGATTCAAACTGAGGAGGTCTTGGCTCTCGGGGCAATGTCATG
TACGCACCTTTGAAGGTCACACTGGAGGAATTAGTTGCATTCAATTAGAT
AGAAATCGTATCGTTAGTGGTTCACATGATAAAACTATCAGAGTATGGAA
TATTAAGACTAATAGCCCATGGTCTGTCATGACTCTAAGTGGACATTCTG
GGGAAGTTCGATGTTTATATCTGGAAGGGAATAGACTTGTAAGCGGAAGT
GCGGATTCTACCATCAAAGTTTGGGATTTGGACATACAATCCGAATGGTC
TTCCATTGCTTGTAAAGTGACTATGGTTGGGCATTTAGATAAAGTCCGTG
CAGTTACCATGAATAGAAATAAGGATTTAGTAATTAGTGGCTCTTATGAT
CAAACAGTTAAAATTTGGTGCCTTAAAACTGGTTCATGCAAAAGAACTCT
AAGGGGGCATGAAGGACCCGTTTTATGTGTTCATTGGGCTGGGTTTACAT
TGCTCTCAGGGTCAGCTGATAAAACAATCAAGGTAATTACTTGTTTCTTT
CCTTTTTATTGGAAAAGTCTGATACACTATCCCATTCCATAATCCCTTTA
GCAATGGTCTGTTGAGACTGGAGAATGTATTCGCACACTCACCGGGCATG
GTGATGCTGTAACATGTATATCCCTTGAAACAGATAGAATTGTGACTGGC
TCCTTGGATCGAACGATTAAATTATGGGATTCTAAGACGGGAAAATGTGT
CTCAACTCTGGACTGGATGTCATCTGAAGGGCACACGGGAGTTATTCGTT
GCCTTCAAGCCGACAACTGGCGAATTGTTTCTGCAGCTGATGATAAAACG
ATTAAAGTATTAAGCTCATTATAAGTTTTACTAGTGTTGTGTCGGTCCTT
AATTATTCGGTCCAGTCCAGTCTTAAGACTGTTCCTTAATACTGTTTATC
TTAAGAACTGTCAGTACTAGAATTGATTTTTAAAAGAATAGATAAAGTTA
AGGGATGTCATCAAGGACTGAACTGAAGCCTTCAGTACTAAACAAGGACT
TGCACAACACTAATTTTTTTCAAGTTGATTTTTTATTTTTATAAAAGGTT
TGGTCCTTGGAAACGGGCCGACGTTTGGTGACTCTAAAATCCCATACCGA
TGGAGTGACGTGCCTACAATTCAACGATTTTTGTATTGTTTCTGGAAGCT
ATGATAAGACTGTCAAACTATGGGATTTTACCGTCTGTTAAAATATCCCT
CCCATATACCACACTACCAATTTATAACCCAATGATTCCTTAAATTACAA
AGAATGAAAGAAAAGTTGCAACTGTTAACCAGATTTATATATATATATTA
TTTCTTTATTATATATGTGTATCATTAGGTATGAGAATATTGTCTAAATT
GTTGTGAGGNTAAAAAAAAAAAATAGTATTTGTAGATAAAAGCAAGATAT
GAATTAATGTTTCCTCCCTATTTTGAAAGTATCATCCGCAAGCAAGGAAA
ACTATAGTGTTGTGACTGTCCTTATTTAGGACTGAAGGCTGTAGTCCCGT
CTAATTCAGTCCTGAAGCTTATAAAGTTCCGTCTTTTATGATGTCACTCA
ACTTTAATTCTCTTTTTTAACCTGATCTAATACTGACAGTTTTAAGACCG
AATAAACAAGGACTGACCATAACACTGGCTCTTATTGATTGCTGCGAGTA
AATAAGTCGTCTCTCTAGGTAACTATATTTTTTATGGCAATCCTACCGCA
ATAAAGACAATATTCCCATCCTTAGGTATACTATATTATTATGATCTATT
TTGTCTTCAATTTATGTTAATCAGTATTAG
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