EMLSAP00000009796, EMLSAP00000009796 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000009796
Unique NameEMLSAP00000009796
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length405
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 243..257
score: 46.38
coord: 371..385
score: 37.37
coord: 201..215
score: 39.63
IPR001810F-box domainSMARTSM00256FBOXcoord: 87..127
e-value: 0.0011
score: 28.3
IPR001810F-box domainPROSITEPS50181FBOXcoord: 81..127
score: 11.405
IPR001810F-box domainSUPERFAMILY81383F-box domaincoord: 76..171
IPR001680WD40 repeatSMARTSM00320WD40coord: 177..214
e-value: 5.5E-8
score: 42.5
coord: 219..256
e-value: 1.7E-6
score: 37.6
coord: 265..304
e-value: 3.2E-5
score: 33.3
coord: 307..344
e-value: 3.5E-8
score: 43.2
coord: 347..384
e-value: 1.3E-9
score: 47.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 348..384
e-value: 1.9E-10
score: 40.0
coord: 268..303
e-value: 2.8E-6
score: 26.8
coord: 308..344
e-value: 1.5E-11
score: 43.5
coord: 223..256
e-value: 9.4E-8
score: 31.5
coord: 180..214
e-value: 4.4E-10
score: 38.9
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 184..223
score: 13.282
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 226..258
score: 13.182
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 314..353
score: 12.447
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 354..393
score: 14.92
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 272..313
score: 13.984
IPR015943WD40/YVTN repeat-like-containing domainGENE3D2.130.10.10coord: 192..395
e-value: 1.7E-62
score: 210.5
NoneNo IPR availablePFAMPF12937F-box-likecoord: 85..129
e-value: 9.7E-10
score: 37.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 81..191
e-value: 4.2E-23
score: 80.9
NoneNo IPR availablePANTHERPTHR22844F-BOX AND WD40 DOMAIN PROTEINcoord: 27..404
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 371..385
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 243..257
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 201..215
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 184..393
score: 49.171
IPR017986WD40-repeat-containing domainSUPERFAMILY50978WD40 repeat-likecoord: 180..396

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000009796 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000009796EMLSAT00000009796-705643Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000009796 ID=EMLSAP00000009796|Name=EMLSAP00000009796|organism=Lepeophtheirus salmonis|type=polypeptide|length=405bp
MRKKSKCDKGRSNGPDLNGEIMSPGEFKIRLDALCSWVEDCNEYQKDAIL
RTLFPHLGASQLHWLSLQCPDLHAQCPSGCNDFIQKLPIHCAYKXLSYLD
PSSLTASAQVCKYWRDLSNADWLWHRLCFIQKWRLSSFGSRDQITRLRQR
SNTGDMLINWKHVFRERFKLRRSWLSGQCHVRTFEGHTGGISCIQLDRNR
IVSGSHDKTIRVWNIKTNSPWSVMTLSGHSGEVRCLYLEGNRLVSGSADS
TIKVWDLDIQSEWSSIACKVTMVGHLDKVRAVTMNRNKDLVISGSYDQTV
KIWCLKTGSCKRTLRGHEGPVLCVHWAGFTLLSGSADKTIKQWSVETGEC
IRTLTGHGDAVTCISLETDRIVTGSLDRTIKLWDSKTGKCVSTLDWMSSE
GHTGY
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