EMLSAT00000009857, EMLSAT00000009857-705704 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009857
Unique NameEMLSAT00000009857-705704
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s63supercontigLSalAtl2s63:821336..823444 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009857 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009857EMLSAG00000009857-692623Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000043782EMLSAE00000043782-752710Lepeophtheirus salmonisexon
EMLSAE00000043783EMLSAE00000043783-752711Lepeophtheirus salmonisexon
EMLSAE00000043784EMLSAE00000043784-752712Lepeophtheirus salmonisexon
EMLSAE00000043785EMLSAE00000043785-752713Lepeophtheirus salmonisexon
EMLSAE00000043786EMLSAE00000043786-752714Lepeophtheirus salmonisexon
EMLSAE00000043787EMLSAE00000043787-752715Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779842auto779842Lepeophtheirus salmonispolypeptide
EMLSAP00000009857EMLSAP00000009857Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009857

>EMLSAP00000009857 ID=EMLSAP00000009857|Name=EMLSAP00000009857|organism=Lepeophtheirus salmonis|type=polypeptide|length=395bp
MSLASARPLVXXRSEKGLPAGXXVTLPAVFKAPIRPDVVSFIHHEVAKNR
RQPYAVNQDAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG
GHMFAPTKTFRRWHRKVNVAQKRYAMCSAIASSGVPALVMAKGHQIQDVH
EVPLVVQDKVESYTKTKDAMILLHRLKAWKDIDQVYKSKRMRPGKGKMRN
RRRIQKLGPLIVYNKDEGVRRAFRNIPGCDTIQVENLNLLKLAPGGHVGR
FCIWTESAFKKLDTLYGTWKKPSSEKKGWNLPQPKMANTDLTKLLKSEEI
RKVLRAPKYVFTTILLLSRKINRKVPKNNPLRNVRTLLRLNPYAAVMKRS
AELVQAKRLREKATIAAKKAGKXPPVNPMAKRAAAMARRSSKKPK
back to top

mRNA from alignment at LSalAtl2s63:821336..823444-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009857-705704 ID=EMLSAT00000009857-705704|Name=EMLSAT00000009857|organism=Lepeophtheirus salmonis|type=mRNA|length=2109bp|location=Sequence derived from alignment at LSalAtl2s63:821336..823444- (Lepeophtheirus salmonis)
ATGGTAAGCATCCTCCAACCTCCATCTATGGCATATCCTCAGTACAGGCT ACATGTCTCTTCTCTCGAGTTGTCGTGCAGGAGGGATCTTGGCGCCTCAT TCTGACTCTAGGATTGCTGTCTGAAGCCACTTGAAAGAGACATGTATTAA TACTTGTCTTGTTTTCTCCATTTGCAGTCTCTAGCATCGGCTCGTCCTTT AGTGNCGGMGCGTTCTGAGAAAGGACTACCCGCCGGGAGMKCTGTTACAC TCCCCGCCGTATTTAAGGCACCCATCAGACCTGACGTGGTGTCTTTCATC CATCATGAGGTCGCCAAGAACCGTCGTCAACCTTATGCCGTGAATCAAGA CGCTGGTGAGTGTTGAGGGATATTGTGCGGCAACCATGTCCTCGTTTGGG GTTAATTCCATACCTCGAACGATCCTTAAGAGTTGCAAAAGTAAAGGAGG GTTGGCGTTTCGGAGTTCCTTTTCATGGGAACTTGGTGGTAACGCCCTTA CGACAAATTAACTATGAATTGGCACACTATTGCACAGATTTGCTACTGTT GAATTGATGGCATTATAACTTTTTGTCTTTGTTCCTTAGGTCATCAAACC AGCGCCGAGTCCTGGGGTACTGGACGTGCTGTAGCTCGTATTCCCCGTGT TCGTGGTGGAGGAACCCACCGCTCTGGACAGGGAGCTTTCGGCAACATGT GCCGTGGTGGACACATGTTCGCTCCAACCAAGACCTTTAGACGCTGGCAT AGAAAAGTGAATGTAGCTCAGAAGCGTTATGCCATGTGCTCTGCCATTGC CTCCTCTGGTGTACCTGCATTGGTTATGGCCAAGGGTCATCAGATCCAAG ATGTACATGAAGTACCCCTAGTCGTCCAAGATAAGGTTGAAAGTTACACC AAGACCAAGGACGCCATGATCCTCCTCCACCGCCTCAAAGCCTGGAAAGA TATTGACCAGGTAATTCCATCTGCCATTCCTCTCCCCAGATTTTTTTTAA AAACCTGATGATCACACGTTATTCACGTTGGTCCGTGTTTATGATTCTTC TTTGATTCTATTTACCCTCTGAAAATTAGATTCGAAATCTTATTTAATGT ATTTGTGTAGGTGTGAGTCTTTATTATCCTCTATCTCTAGGTATACAAGT CAAAACGTATGCGCCCTGGTAAGGGTAAGATGAGAAATCGTCGTCGTATC CAAAAATTAGGTCCTCTAATAGTCTACAACAAAGATGAGGTAAATGAATA TTATATATTATTTAAATCTGCAGTTGTGATGATTTTGATTTTTTTCACGT TGGTCCGTGTTTCTTAATTTAATTGATGAGTTTATCTTGCTGAATTCAAT ATAATCAAATATGCTATTAAGTGATATGTTTCAAAATAACTATTTATTTA ATTATTTTTTCTATACAATAGGGTGTGAGAAGAGCATTCCGTAACATCCC TGGATGCGACACTATTCAAGTAGAAAATCTAAATCTCCTTAAATTGGCTC CTGGTGGTCATGTTGGTAGATTTTGTATCTGGACTGAATCTGCCTTCAAA AAATTAGACACTCTCTACGGTACATGGAAGAAACCCTCATCTGAAAAGAA GGGATGGAATCTTCCTCAACCTAAGATGGCTAATACCGACCTAACTAAAC TCCTCAAGTCGGAAGAGATCAGGAAGGTTCTCCGGGCTCCCAAGTACGTA TTTACTACAATTTTGTTACTTTCGTATTAATGTGATGAAACCAAATTTAT TTACATTCAGAGCATTGGGTTCTGAACATACCATGAATGAGTATAATTAT CTGAAATTAAAAAAAAAAAAATTATGATAAACAAAATCCTGTGATGTTGA AGACTTATGTTTTTCTTTTTGTTACAGTCGTAAGATAAATAGAAAGGTGC CCAAGAACAATCCTCTCCGTAATGTCAGGACACTCTTGAGGTTGAATCCT TATGCAGCAGTCATGAAGCGCAGTGCCGAGTTAGTTCAAGCAAAGCGTCT TCGGGAAAAAGCAACGATTGCAGCTAAGAAGGCTGGCAAGKCCCCTCCTG TCAATCCTATGGCTAAAAGAGCTGCCGCCATGGCCAGAAGAAGTAGCAAG AAACCTAAG
back to top
Add to Basket