EMLSAT00000009989, EMLSAT00000009989-705836 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000009989
Unique NameEMLSAT00000009989-705836
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s653supercontigLSalAtl2s653:74487..76320 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000009989 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000009989EMLSAG00000009989-692755Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000044413EMLSAE00000044413-753341Lepeophtheirus salmonisexon
EMLSAE00000044414EMLSAE00000044414-753342Lepeophtheirus salmonisexon
EMLSAE00000044415EMLSAE00000044415-753343Lepeophtheirus salmonisexon
EMLSAE00000044416EMLSAE00000044416-753344Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771431auto771431Lepeophtheirus salmonispolypeptide
EMLSAP00000009989EMLSAP00000009989Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000009989

>EMLSAP00000009989 ID=EMLSAP00000009989|Name=EMLSAP00000009989|organism=Lepeophtheirus salmonis|type=polypeptide|length=312bp
MKSVQLFVALVSVALTGSVFGRSQPVAIPEKCVFLTNTINTNGGEYSYID
PLGSLVTISYEIGANGQYTETRKVVNDYASGHGGSGSASTDVNVVINQVI
QEIEVQITTTIEQVLISTNVNAPNFRPNNLVEIILKKLRPIITTTVRRII
SSSGLNLNINEVVENVIAQIXPSILQGVESAIKGNSDFNNGKNKPGKKPT
GSLSGQGENSALLIDQIIAQLRPFIVQTVNQQTKIQCQNHGGSSSGFVSS
TGSSFGSSRPSRPSTGSSRPSSGSARPSSSGSASSSGFESRQAVLLLALV
VHQVCPQEISTS
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mRNA from alignment at LSalAtl2s653:74487..76320-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000009989-705836 ID=EMLSAT00000009989-705836|Name=EMLSAT00000009989|organism=Lepeophtheirus salmonis|type=mRNA|length=1834bp|location=Sequence derived from alignment at LSalAtl2s653:74487..76320- (Lepeophtheirus salmonis)
ATGAAGGTAAGAATATATCGAAAAAGATTCGACATTCCTTTCAACATAGT
ACTAATATATTATTCTCAATTTTCAGTCAGTCCAATTATTTGTTGCTCTA
GTGAGTGTTGCCTTAACCGGATCAGTATTCGGAAGGTCTCAGGTAAATCC
TTCGCTAATTTATAAGTCTAATTTGATTAACATCCCTTATATTATATTAT
TGCAGCCTGTTGCAATCCCAGAAAAGTGTGTTTTTTTAACAAATACCATA
AATACGAATGGAGGAGAATACTCTTACATTGACCCTTTAGGGTCCCTCGT
TACCATTTCTTATGAAATTGGAGCCAATGGACAATACACTGAAACACGTA
AAGTAGTAAATGACTATGCCTCTGGTCATGGAGGATCCGGTTCTGCCTCC
ACTGATGTAAACGTTGTTATTAATCAAGTTATTCAAGAAATTGAAGTTCA
AATTACAACCACCATTGAACAGGTCTTGATATCCACAAATGTCAATGCTC
CTAACTTCCGTCCAAATAATCTTGTTGAAATTATTCTTAAGAAGCTTAGA
CCCATCATTACCACAACTGTTCGTAGAATCATCTCCAGCTCTGGATTGAA
TTTGAATATCAATGAAGTTGTTGAAAATGTTATTGCCCAAATCCAMCCCT
CTATCCTCCAGGGTGTTGAGTCTGCCATTAAAGGAAATTCTGATTTCAAT
AATGGAAAGAACAAGCCAGGAAAGAAACCAACCGGCAGTTTGTCTGGACA
AGGAGAAAATTCTGCTTTATTAATTGATCAAATCATTGCTCAACTCAGAC
CATTCATCGTTCAAACAGTCAATCAACAAACCAAAATTCAATGCCAAAAT
CACGGAGGATCCTCAAGTGGTTTTGTTTCATCCACTGGAAGTTCTTTTGG
ATCCAGTCGACCCAGCAGACCTTCAACTGGCTCCAGCCGCCCATCCTCCG
GATCAGCTAGACCAAGTTCAAGTGGTTCTGCTTCATCTTCTGGATTTGAA
TCTCGTCCATCYTCCGGMTCAAACAGSCCCTYATCTRGCTCYARCCGTCC
ATCCTCWGGATCAAGCMGACCCTCATCTGGATCNNNNNNNNNNNNNNNNN
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NNNNNNNAACTAGACCAAGCAGACCCTCATCTGGATCAACTAGACCAAGC
AGACCCTCATMTGGTTCCAACCGTCCATCATCTGGATCGAGCAGACCATC
ATCTGGATCCAGCCGTCCGTCTTCTGGATCAAGCAGACCTAATATACCAT
CTATTGGATCTACAAGGCCAAGCCGTCCTTCTTCTGGCTCTAGTCGTCCA
TCAAGTGTGCCCACAGGAAATATCAACAAGTTAA
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