EMLSAT00000010162, EMLSAT00000010162-706009 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010162
Unique NameEMLSAT00000010162-706009
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AN F337 male
  1. PreAdult1
  2. Adult
-Missing-
-Missing-
01.11.2017 - 07:35
03.01.2018 - 23:23
10162 10162 male
  1. PreAdult 1
-Missing-
-Missing-
22.02.2018 - 10:36
27.03.2018 - 10:36
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s672supercontigLSalAtl2s672:226886..228465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010162 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010162EMLSAG00000010162-692928Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000045185EMLSAE00000045185-754113Lepeophtheirus salmonisexon
EMLSAE00000045186EMLSAE00000045186-754114Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774888auto774888Lepeophtheirus salmonispolypeptide
EMLSAP00000010162EMLSAP00000010162Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010162

>EMLSAP00000010162 ID=EMLSAP00000010162|Name=EMLSAP00000010162|organism=Lepeophtheirus salmonis|type=polypeptide|length=513bp
MTVENRSLESTLLFDPHWGWEGEEIILILEILLITSGVVLLKSKTMHKII
TWIPESCIWVTFGIAFRAFRTALNVTLIGGKFNKHHIILNILIPPIILEG
SYKLYSKELLFQIFGILNFAVLGTAFCIGCVGLGIYYLGRGISPNDSLLL
ATIVSAVDPVTVLAIFDQIKVTPSLYVLIFGESLLNDGVTLAAFESLNAM
SKYDGTPSGVAYFLGIVSVITRTLGGAIIGILCGLISAIYTKFNNSKAYQ
ALPLILLSYVCFMTAETLSFSGIAGIIGCGLVQRRYAFINIGSRSRHALA
RTTKFFAAVGEAIIFILLGEASYGASWKKRDMLFIMXLYQYALYLDSSWF
TLWAKHLFVISYGGLRGAMSYVMIKTITVEGNKERKNKIDIDLFNEVTLS
VVLFTIYILGGTVRFVAKAMKLRTSETIHTDRLLTIIIDRITQHATAGME
SILGGGIRRMHSWIETMELFDNKYIRPYISRNQGLKSQLEVQKVMKKNLL
KESFILTEILFIC
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mRNA from alignment at LSalAtl2s672:226886..228465+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010162-706009 ID=EMLSAT00000010162-706009|Name=EMLSAT00000010162|organism=Lepeophtheirus salmonis|type=mRNA|length=1580bp|location=Sequence derived from alignment at LSalAtl2s672:226886..228465+ (Lepeophtheirus salmonis)
ATGACTGTTGAAAACAGGAGCTTAGAAAGTACCTTATTATTTGATCCTCA TTGGGGATGGGAAGGAGAGGAAATTATTTTGATATTAGAAATTTTGTTGA TAACTTCTGGCGTAGTTCTCTTGAAGTCAAAGACAATGCATAAAATAATA ACTTGGATCCCAGAATCATGTATCTGGGTTACTTTTGGAATAGCATTCAG AGCCTTTAGGACGGCACTTAATGTGACATTAATTGGAGGAAAATTTAACA AACATCATATTATTCTAAACATTTTAATACCTCCCATCATTCTCGAAGGA TCGTATAAGTTATACAGCAAAGAATTATTATTTCAAATCTTTGGTATACT GAACTTTGCTGTTTTGGGTACGGCCTTTTGTATTGGATGTGTTGGACTAG GAATTTACTACTTAGGTAGAGGAATAAGCCCTAATGACAGTCTCCTTTTG GCAACAATTGTTTCTGCAGTAGATCCTGTTACAGTGCTTGCCATATTCGA TCAAATAAAGGTCACGCCGAGTTTATATGTTCTCATTTTCGGGGAATCTC TATTAAACGATGGAGTGACATTAGCAGCTTTTGAGAGTCTTAATGCGATG TCTAAATATGACGGAACACCATCCGGAGTAGCTTATTTTTTAGGTATAGT ATCGGTGATTACAAGAACATTGGGAGGTGCAATCATTGGAATATTATGTG GCCTCATATCAGCAATATACACCAAATTTAATAACAGTAAGGCTTATCAA GCTTTACCCTTAATCCTGCTATCTTATGTCTGTTTTATGACAGCGGAAAC CCTAAGTTTTTCGGGAATAGCAGGAATCATAGGTTGTGGTTTAGTGCAGA GGAGATACGCCTTCATAAATATAGGAAGTAGATCTCGTCACGCATTAGCT CGGACAACTAAATTTTTTGCTGCAGTTGGAGAAGCTATCATATTCATACT ACTCGGAGAAGCATCATATGGAGCATCTTGGAAGAAAAGGGACATGCTTT TTATCATGTNGTTATATCAATATGCATTGTATCTCGATTCATCATGGTTT ACACTTTGGGGTATATTTGTAATAAAACGAAGTTAACACACATATCAGCA AAACATTTATTCGTGATTTCTTATGGAGGTTTGAGAGGAGCTATGTCATA TGTAATGATAAAAACTATAACCGTGGAAGGCAATAAAGAAAGAAAAAATA AAATTGACATAGACCTCTTCAATGAAGTAACATTGAGCGTTGTTCTTTTC ACAATTTATATCTTAGGTGGAACAGTTCGTTTTGTTGCCAAAGCGATGAA ATTAAGAACCTCAGAAACTATTCATACAGATAGATTGTTGACAATAATTA TTGATCGAATTACTCAACATGCAACCGCTGGAATGGAATCCATTTTAGGA GGAGGAATACGAAGAATGCACTCATGGATTGAAACAATGGAATTATTTGA CAATAAATATATTCGCCCATATATTTCAAGGAATCAAGGCTTAAAATCAC AGCTGGAAGTGCAGAAAGTCATGAAAAAAAATCTCTTAAAGGAATCATTC ATATTAACCGAGATATTATTCATTTGCTAA
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