EMLSAT00000010271, EMLSAT00000010271-706118 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010271
Unique NameEMLSAT00000010271-706118
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s680supercontigLSalAtl2s680:142787..148655 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010271 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010271EMLSAG00000010271-693037Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000045654EMLSAE00000045654-754582Lepeophtheirus salmonisexon
EMLSAE00000045655EMLSAE00000045655-754583Lepeophtheirus salmonisexon
EMLSAE00000045656EMLSAE00000045656-754584Lepeophtheirus salmonisexon
EMLSAE00000045657EMLSAE00000045657-754585Lepeophtheirus salmonisexon
EMLSAE00000045658EMLSAE00000045658-754586Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773179auto773179Lepeophtheirus salmonispolypeptide
EMLSAP00000010271EMLSAP00000010271Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010271

>EMLSAP00000010271 ID=EMLSAP00000010271|Name=EMLSAP00000010271|organism=Lepeophtheirus salmonis|type=polypeptide|length=1287bp
MSFLRGSANYVWCTTSVLGKGATGAVFQGVNKHNGETVAVKTFNQLSHMR
PQEVQMREFEVLQKVKHENIVKLLAIEEEQEGRGKVIVMELCTGGSLFNL
LDDPENSYGLHEDEWLXVLSHLSAGMNHLRDNNLVHRDLKPGNIMKFIKD
DGNIVYKLTDFGAARELEDDQQFVSLYGTEEYLHPDMYERAVLRKTVGKT
FGATVDLWSIGVTLYHVATGNLPFRPFGGRRNKETMYHITTKKSSGVISG
VQTSENGPIQWSRELPNSCLLSAGIKKHITPLLAGLLEVNPQKRWTFERF
FSQVTWILDKKKLHIYFMNKLTPHRIYLDRTEGLDTFKTILSEQTEISPD
NDMIILFGENELSHYVQDSTPGTEFPDTNPSKPIVLFNKNNNNIFIGMEK
EVPTFPTISNLVSVENDATLAKSACAVGYCYKRKIDSYTQCLNIMNASIE
MLSEVVKIRLSELLDASHGCIKLTKLIENQIHFFVSTHEINIKLSKEPFS
KNPPNDDDSSYQSLQSLVLDEEEGLKNLKNQFAELYPAVEQLNRRFVKDD
QLKKEWQEVTREFPPEVLTAANKANTYVTKLKESWQHLLRDRASRTLTYN
DEQFHILEKIKMQETIKVLVELLQKESEPALVNQMEGLADWYKMAQTTFI
QAEILFKDIAVFKENIRHFSESLKLSQDRYLEKMVSLVEEAETIKINNMK
KEEIESCKIMEAFRKRISDRIHILPLFRTNSSPASSLCDIGSPTQVKHVV
NVRVEDGNVVGMPDSWLKAFVERVNLDRENGDKDATENGANVLKFFKELS
RDNSCRRKKGKRRIAGKLVTQSVVFPELCEEKVEVTRDNPILSSRPTYER
VQSSNDTDTVYKETPVLRKIKCLNSKKEFLDPPAFLRARSSSYSSPVKDV
PYHSDDNDDRDYEEEVVPTSEKSHILESLQLQSNMAQTISELKISFGEPI
KKSAKKNSVLVPKTSSKLRPISPEIENLHEFRLFSQFTNREAVEEMQKFT
NSSCIYDEFRFSSKLGSGSGGTVWLGLSKRNLTEKVAIKQIDLDNENIQK
FHLLMEVQVMRKLEHPNLVAFLDLFLTDKELWVVMDYMNGGPLTDVVLHT
ILNEPQMSAISKEVLSGINYLHNHELIHRDIKSDNVLLSVKGDVKITDFG
FTANVSGDRMRKTFAGTPYWMAPEVVKKQTYGKSVDIWSLGILVIEMVDR
HPPYMDETPLQAMYYISKKKSPPIKSKGILSKEMSKFLERCLQFQPNKRS
TASELLEHEFIAKATRLSSLKENIKLVLMKKHEQSKK
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mRNA from alignment at LSalAtl2s680:142787..148655-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010271-706118 ID=EMLSAT00000010271-706118|Name=EMLSAT00000010271|organism=Lepeophtheirus salmonis|type=mRNA|length=5869bp|location=Sequence derived from alignment at LSalAtl2s680:142787..148655- (Lepeophtheirus salmonis)
ATGTCATTTTTAAGGGGTTCGGCTAATTATGTTTGGTGTACGACAAGTGT
ATTGGGGAAGGGTGCCACGGGAGCCGTTTTTCAGGGTGTGAACAAGCATA
ATGGGGAAACAGTGGCCGTGAAGACCTTTAATCAATTGTCGCATATGCGG
CCCCAAGAAGTGCAAATGAGGGAATTTGAGGTGCTGCAGAAGGTGAAGCA
TGAAAACATCGTGAAGTTGCTTGCAATTGAGGAAGAGCAGGAAGGGCGCG
GCAAGGTGATTGTGATGGAGCTTTGTACAGGTAATGAAAGAATGGATTTA
AAGAATCAGATTGAACATATTGTCTGTGCTTTTAGGCGGTTCCCTCTTTA
ACCTATTGGATGATCCAGAAAATAGTTATGGGCTGCACGAAGATGAGTGG
CTCCYCGTTCTTAGTCACTTATCTGCAGGAATGAATCATCTCCGTGATAA
TAACTTGGTGCATCGGGATTTAAAACCTGGAAATATCATGAAATTCATCA
AGGACGACGGAAATATTGTGTATAAGCTCACAGATTTTGGGGCTGCGAGG
GAATTGGAGGATGATCAACAGTTTGTGTCTCTTTACGGCACTGAAGAGTA
TCTTCATCCTGACATGTATGAGAGGGCAGTACTCAGGAAAACTGTTGGCA
AGACCTTTGGAGCAACAGTAGATCTATGGTCTATCGGTGTAACTCTATAT
CATGTTGCTACAGGAAATTTACCATTTCGTCCATTTGGTGGTAGAAGAAA
CAAGGAAACCATGTATCATATCACCACCAAAAAATCATCTGGAGTTATAT
CAGGTGTTCAAACGAGTGAAAACGGACCGATTCAGTGGAGTAGGGAACTT
CCTAATAGTTGTTTATTGAGTGCAGGAATTAAAAAACATATAACACCACT
CCTTGCGGGCCTACTTGAAGTGAATCCACAAAAGCGTTGGACTTTTGAGC
GATTTTTCTCTCAAGTTACTTGGATTTTAGACAAAAAAAAACTTCACATT
TACTTCATGAATAAATTAACACCCCATCGAATTTATCTGGATAGAACAGA
GGGGTTAGATACATTTAAAACAATTCTATCGGAACAGACTGAAATATCAC
CAGATAATGACATGATCATCTTGTTTGGAGAAAATGAATTAAGTCATTAT
GTCCAAGATTCTACACCTGGAACTGAGTTTCCAGATACCAATCCCTCCAA
ACCTATTGTCCTTTTTAACAAAAATAATAATAATATTTTTATTGGAATGG
AAAAAGAGGTTCCAACGTTTCCGACGATTTCAAATCTTGTTAGTGTGGAA
AATGATGCCACACTTGCAAAAAGTGCTTGTGCTGTTGGGTATTGCTACAA
AAGAAAAATTGACTCTTATACTCAATGTTTAAATATAATGAATGCATCTA
TTGAAATGCTCTCAGAAGTTGTGAAAATACGTTTAAGTGAGCTGTTGGAT
GCATCACATGGCTGTATCAAACTAACAAAATTAATAGAGAATCAGATTCA
TTTTTTTGTGTCCACTCATGAAATCAATATTAAGCTCTCTAAGGAGCCTT
TCTCCAAGAACCCACCGAATGATGATGACTCGTCTTATCAAAGCCTTCAA
TCTTTAGTTTTAGATGAAGAAGAAGGGCTCAAAAATTTGAAAAATCAATT
TGCGGAATTATATCCCGCAGTTGAACAACTGAATCGACGATTTGTCAAAG
ATGATCAATTGAAGAAAGAGTGGCAGGAGGTCACAAGGGAATTTCCTCCC
GAGGTACTAACGGCTGCTAATAAAGCAAATACTTATGTCACTAAATTAAA
AGAGTCCTGGCAGCATTTACTTCGTGATAGAGCCTCCAGAACCCTTACGT
ACAATGATGAACAGTTTCATATTCTTGAAAAAATTAAAATGCAAGAGACT
ATCAAAGTGTTGGTTGAGCTTCTTCAAAAGGAAAGTGAACCTGCTCTCGT
TAACCAAATGGAAGGCCTTGCAGATTGGTATAAAATGGCTCAAACAACCT
TTATTCAAGCCGAAATATTATTCAAAGATATTGCTGTATTTAAAGAAAAT
ATTCGTCATTTCTCAGAGTCCTTAAAACTTTCGCAGGATCGCTACCTTGA
AAAAATGGTGTCTCTTGTAGAAGAAGCTGAAACCATTAAAATCAATAACA
TGAAAAAAGAAGAAATCGAGTCTTGTAAAAGTAAGATGGAGTCTAGACAA
ATCAAAATGGCAATAAAGTCAATACTCTCCACACAGGACGAAGTGTGGGG
AATTTTAAGAGAAAATACTCGTTTAATTGAACAATTTGGTCAATTAGCTA
CGATTGCCAATTCCTCAACTGGCTCTGACCAAAATGCTGCTGAAATTTTA
GCTAAAATAGAACAATTATCATCATAGTCTTAAGGCTGATATCACACACC
TTTCAGATTTCAAATATTCATGCTGTATATTATTGAAAAAAGTTTATTAT
GACCCTCTTTAGTTTCTTTATAGATTTGTTGTACAAATTTTGACACATTT
TATTTCCCATTATGTATTTTTCTTTGAGATGAAATCTTCTCAAAGGTTTT
TACCCTTATGGCGTTTAAATTGGATAATTCGCGACATATTTGCATTTCTG
CTATTACTATTTCCTTGTTTACACCAAAGATAACTTCTTGTGATTATTTG
GGAGTATTATTTTCGTAGTTATCCCAATCTTTCTTCCTCAAGGTATTATA
TTTCATTAATTTGATAAAATAAATACAATGTCTCTAATATATTGGTCTTT
CATTGTAATATTTCTGATCAGTGGTATTATACCGTGTAAAAGTATCATTA
TCTTGCATGACCAAATTTAGATTTCGAAAAAAAAATTGTCAATTTTGTTC
TTCATATTAATTGTAGATAATTTTATTCATGAATCTTTAACCGAATTTAT
TCAAAAATTAAGTGGAATCAGAAATACTTATAAACCTGGATTAGGTTATT
GTAATTTGATGGTGAAATTAAAATGAAATAAATCATCAATTCATGCATAC
CCAATACCCATTCTTTCTGTTATAAAGAGTTTATCAAATAAACTGATCTT
GGGACACAGAACAAGTTAAATACTACTGGATTAATAGGTCAATGAAAACA
ACGAAAGATACGTATGTAATTCAAATTTTGTGGAATGTCAATATCCGAAT
AAGACACCTAGTGGATAGCAGGTTCTTGGAAACGAGTGTTAACGAGTAAG
GAAATACATATATCATTAGTACTTAGAGAATAAGGATTAATTATCCAGTT
GGATTGTTAGTTTAATTTGAGTGGTAAGACGTGGTTGAGCTGAGAGTTGA
GATTCACTGAAAAGCTCTACTATCTACAAATATGATACCAAAGGATCCTC
AGCCCTGTGTATGCACTATATCCCATTCCCTTACCCCCAACAAGAATATT
GAAGGTGGACGACTCCTTTTGGCTCGACAGAAATATGAGGAATCCAAATA
CACTGCTTCTCTGTGCTACTTGTCGGTCATCCTTGTAGCTATTCTAGTCT
TGTTACTAACATTCTTTGTGCTGTGGATGGGATATGATCACAAGGAAACG
TATGTAGTTCCTCTAGGAGGCGATCGGAAATGGTTTGATGGTACATATGA
AGGGTATAGAATTAGGAGAGATGCCAATAACGGATTTCGTGAACCCTACG
TATCTGATCCTTTTAGAAGTTCACTTAGTGCTGAAAGTACAAACGATGAG
CGAATCTCCGCTTTTATAGATGATAATGATCCTTTTAGAAATAATTGATT
TTATAACATAATAATTACGCCTCATTTATTTACTGACATTATATTTTATT
ACATATATCTATTAAGTCTTCTTATGTATTATTTATTCAAATTAATATAT
ATATATATATGTATGAACTATATTCTCTAAAAGAAAAACATTAGTTACGT
TTCAAGTGAAACTCATTCTTATCGGAAGACTTCGTATCACACATTTCCTC
TATTTCTTTCTTTTTTTTTGAACAAGGGTTCTTTAGTTCTTTTAAAATCT
TATTCCATAAGTTATGGAGGCTTTTCGAAAACGCATCTCTGATAGAATCC
ACATCTTACCCTTGTTTCGAACGAACTCTAGTCCTGCATCTTCTTTGTGT
GACATTGGATCTCCTACTCAAGTTAAGCATGTTGTCAATGTACGTGTTGA
AGACGGTAACGTTGTAGGCATGCCGGATTCATGGCTAAAAGCCTTCGTTG
AACGGGTGAACCTAGATAGGGAAAATGGAGACAAGGATGCTACTGAAAAT
GGAGCTAATGTCCTTAAATTTTTTAAAGAACTTTCGAGGGATAATAGTTG
TCGTCGTAAAAAGGGTAAACGGCGGATAGCTGGGAAATTAGTAACTCAGA
GTGTTGTTTTCCCAGAGTTGTGTGAAGAAAAAGTGGAAGTTACAAGAGAT
AACCCAATTTTATCTTCTAGGCCGACTTATGAACGAGTGCAAAGTTCCAA
CGATACTGACACAGTGTATAAGGAAACTCCCGTGCTTCGAAAAATAAAAT
GTTTAAACAGTAAGAAGGAGTTCCTCGATCCTCCTGCATTTTTGAGAGCC
AGAAGTTCATCTTACTCTTCTCCAGTCAAGGATGTACCATATCATTCAGA
TGATAATGATGATAGAGATTATGAGGAAGAAGTTGTTCCGACCTCTGAAA
AATCTCATATCCTAGAAAGTCTTCAACTACAGTCGAATATGGCACAGACC
ATATCTGAATTAAAAATAAGTTTCGGTGAGCCGATTAAAAAAAGTGCAAA
GAAGAATTCGGTCTTAGTTCCTAAAACTAGCTCCAAACTCAGACCTATAT
CTCCTGAGATCGAAAATCTACATGAATTCAGATTGTTTTCTCAATTCACA
AATCGTGAAGCCGTTGAAGAAATGCAAAAGTTTACAAATTCCTCCTGTAT
TTATGATGAGTTTCGTTTTTCTTCAAAATTAGGTTCTGGCTCAGGTGGAA
CTGTTTGGCTTGGCTTGAGTAAGAGAAATCTCACTGAAAAAGTTGCTATA
AAACAAATTGATCTCGATAACGAAAATATTCAAAAATTCCATCTTTTGAT
GGAAGTACAAGTAATGAGAAAATTAGAACATCCTAATTTGGTTGCGTTTT
TAGACCTTTTCCTAACAGACAAGTAAGTAGATCCATTTATTTCTTGAAAC
TTGAACCAGTGTATTTACATTTGTAGGGAACTCTGGGTTGTAATGGATTA
CATGAATGGTGGTCCATTGACAGATGTTGTACTTCACACTATTTTAAATG
AGCCACAAATGTCTGCAATATCAAAAGAAGTACTCTCTGGTATAAATTAC
CTTCATAATCACGAGCTCATACACAGAGACATCAAATCCGATAATGTACT
CCTTTCAGTTAAAGGAGACGTTAAAATAACAGGTTTGCAAATTTTGGCCA
ATTTGTTAAAGAAATGAAAAACTAATGAAGATTTATTATGTTACTAGATT
TCGGCTTTACTGCCAACGTGTCAGGAGATCGCATGAGGAAAACATTTGCG
GGGACTCCTTATTGGATGGCACCAGAAGTAGTCAAAAAACAGACTTATGG
AAAATCTGTGGACATTTGGAGTTTAGGGATATTAGTAATTGAGATGGTGG
ACAGACATCCTCCATACATGGATGAGACTCCTTTACAGGCCATGTACTAC
ATATCCAAGAAGAAAAGTCCACCTATTAAATCTAAAGGAATACTTTCTAA
AGAAATGTCGAAATTTCTCGAAAGATGTCTGCAGTTTCAACCGAATAAGC
GATCCACCGCCAGCGAACTTCTTGAGCATGAGTTTATAGCAAAGGCTACT
CGACTTTCAAGTTTAAAAGAAAATATAAAATTGGTTCTCATGAAGAAACA
TGAACAGTCCAAAAAATAA
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