EMLSAT00000010382, EMLSAT00000010382-706229 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010382
Unique NameEMLSAT00000010382-706229
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s689supercontigLSalAtl2s689:6732..8311 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010382 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010382EMLSAG00000010382-693148Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000046177EMLSAE00000046177-755105Lepeophtheirus salmonisexon
EMLSAE00000046178EMLSAE00000046178-755106Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768646auto768646Lepeophtheirus salmonispolypeptide
EMLSAP00000010382EMLSAP00000010382Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010382

>EMLSAP00000010382 ID=EMLSAP00000010382|Name=EMLSAP00000010382|organism=Lepeophtheirus salmonis|type=polypeptide|length=356bp
MSNKDDVIESHYYEMGPFTIFTILSVLLGLKSHVSGSPSGHTNNWAVLVD
TSRFWFNYRHVANVLSIYRSVKRLGIPDSQIILMIADDMACNPRNPRPGT
VFNNANQHIDVYGEDVEVDYRGYEVTVENFIRLLTGRLPESTPRSKRLLS
DAGSNVLIYMTGHGGDGFLKFQDSEEVTNIELADAFEQMRSKKRYNEIFF
MIDXCQAASMYSKFYSPNILAVASSLEGEDSLSHHVDPAIGVYIIDRYTY
FALDFLENVQPDSNRTMGEFLKVCPKSQCISTVGTRTDLFKRDPFKVPIT
DFFGSVRDVEIVSHQSLVLTNDIELKPINMSREKAEKVVNYGYLDPLPVL
NSVISN
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mRNA from alignment at LSalAtl2s689:6732..8311+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010382-706229 ID=EMLSAT00000010382-706229|Name=EMLSAT00000010382|organism=Lepeophtheirus salmonis|type=mRNA|length=1580bp|location=Sequence derived from alignment at LSalAtl2s689:6732..8311+ (Lepeophtheirus salmonis)
AATTAACTAAACGTCATGTTTTTATGTTACAACGGTTCAATTTAAGTCAT
TATGTACCGAACTAGAACTAATGACGTCACATAAATAGTGGATTTTATCA
ATGTTATTATAAGATTGGATTTAATGTCAAACAAAGATGACGTAATAGAG
TCACATTATTATGAAATGGGACCGTTCACGATTTTTACAATCTTGAGTGT
ATTATTGGGATTAAAATCCCATGTATCTGGTTCACCTTCGGGACACACCA
ACAACTGGGCTGTACTAGTAGATACATCTCGTTTTTGGTTCAACTATCGA
CATGTAGCCAATGTTTTGTCCATTTACCGCTCTGTTAAGAGGTAAGTAAT
TGTAATCTGCCTTTGGCTGGGTTTTGAAAATCCTCGGGTTTCTTGTACTA
CTCATTGCCTTTTTGAATGATTTTTCCAGATTAGGGATCCCGGATTCTCA
AATAATTCTCATGATTGCGGATGATATGGCCTGCAACCCTCGTAATCCTC
GCCCTGGAACCGTCTTTAACAACGCGAATCAGCACATCGATGTTTATGGG
GAGGATGTGGAAGTGGACTACAGAGGTTATGAAGTGACGGTGGAGAACTT
TATTCGTCTTCTCACTGGAAGGCTACCAGAATCCACTCCAAGGAGTAAAC
GACTCCTCAGTGATGCAGGCTCCAATGTTCTCATTTATATGACAGGACAC
GGTGGAGACGGATTTCTAAAATTTCAGGACTCTGAAGAGGTCACAAACAT
TGAATTAGCAGATGCTTTTGAGCAAATGAGATCCAAGAAGCGCTATAATG
AAATTTTCTTCATGATCGATMCCTGCCAAGCCGCCTCAATGTATTCAAAG
TTTTACTCACCAAATATCCTTGCAGTAGCTTCCTCCTTAGAAGGAGAAGA
CTCCCTTAGTCATCATGTGGATCCTGCAATTGGAGTCTACATCATAGATC
GCTACACTTACTTTGCTTTGGACTTTTTAGAGAATGTTCAACCTGACTCG
AATAGAACCATGGGGGAGTTTCTTAAAGTATGTCCCAAGAGTCAGTGCAT
TTCAACTGTTGGAACACGAACGGATCTCTTTAAGAGAGACCCTTTTAAAG
TTCCTATTACGGATTTCTTTGGATCTGTACGAGACGTGGAAATAGTTTCT
CACCAATCACTCGTCCTAACTAATGATATTGAGCTTAAACCAATTAATAT
GTCTAGGGAAAAAGCAGAAAAGGTTGTCAACTATGGATATTTGGATCCCC
TTCCTGTATTAAACTCAGTCATATCCAATTAAATTATTAATTTATTTCTT
TGAAAATATAGATTTTTTTTTAAATATATTCATTAATTAAGGACTTTGCG
AATTCAGTTTCCTTATTAATAGCTCCTCCTCCATTAATTGTAAATTTTCC
TCCATTTTGATCATCTCTTTAATGTTTCTCAATTCTAATTCCAAGTTCTG
AATTTCCAATTCCACTTTTTCGTCCGTGAATAGAGTCCCAGAGTAGAGTC
TCGGAATTATAACGGATACGTCAATTTTATACCTTGAAGAAAATAAATAA
ATACTCTTTGAGTATACCCCTTAATTCTAT
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