EMLSAT00000010399, EMLSAT00000010399-706246 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010399
Unique NameEMLSAT00000010399-706246
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s68supercontigLSalAtl2s68:348363..350705 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010399 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010399EMLSAG00000010399-693165Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000046280EMLSAE00000046280-755208Lepeophtheirus salmonisexon
EMLSAE00000046281EMLSAE00000046281-755209Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776677auto776677Lepeophtheirus salmonispolypeptide
EMLSAP00000010399EMLSAP00000010399Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010399

>EMLSAP00000010399 ID=EMLSAP00000010399|Name=EMLSAP00000010399|organism=Lepeophtheirus salmonis|type=polypeptide|length=445bp
MSYSSYSSKTLAKQDDRPVINLNVPLPKDVVGKVRVTTVSTKTQVRYKKN
QEDEDYHACHPSFRVTRSWSALVNPEEAKKGIQLKLESEKCEDYQQSLGK
CTESNYLEDSKTSYPTTPVYSPNSEVSIDNVLVHKRHKDNENLDSDVETX
HCRSFIQNSSSGSRLSLLYRNTPSVRKKQKAQYRLNRSLPMSIIDSKLSS
TCSCDKDLSYGPISISKNEQSECLSKDRAPKGKSLYTYNPYSKGMEPNYN
HYSMDSRYGYEEGDVLNKKNDAGMTPARSSEFRRPGDEGKIYRILNVEKQ
LTYVPEVSPNKFCKPNAVIKRYRTVENPITECESSKYFTGFEKVFPNPLT
NLSIFFKKKETIPPRIETKIRTTMVSEIVDRKEVGNDAYKNFIDTHEIDE
EIPIHFTKLSKKQIEKNDPRILRVAXVITVXQXKKVTPEQLRNRF
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mRNA from alignment at LSalAtl2s68:348363..350705+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010399-706246 ID=EMLSAT00000010399-706246|Name=EMLSAT00000010399|organism=Lepeophtheirus salmonis|type=mRNA|length=2343bp|location=Sequence derived from alignment at LSalAtl2s68:348363..350705+ (Lepeophtheirus salmonis)
TAATTTTGTTAAAATGTTTTCAAATTGTCAATTATATTGCGTTTTTGTCT AAGAAGTATTTTCTAATCATTTTAAGTGTAAAATGTCGTATTCGAGTTAT AGTAGTAAAACCCTTGCAAAACAAGACGATCGACCAGTAATTAATTTAAA TGTACCGTTGCCAAAGGATGTGGTTGGCAAAGTTCGAGTCACAACAGTTT CGACGAAAACACAAGTTCGATACAAAAAAAACCAGGAAGATGAGGATTAT CATGCATGTCATCCATCATTTAGAGTTACTAGATCATGGAGTGCATTAGT TAACCCTGAAGAGGCTAAAAAGGGAATTCAACTTAAATTGGAAAGCGAAA AGTGTGAAGACTATCAACAATCGCTTGGAAAATGCACAGAATCCAACTAC CTAGAAGATTCAAAAACATCTTATCCTACAACTCCAGTATACAGTCCCAA TTCAGAAGTTTCGATCGATAATGTTTTAGTACACAAGAGACATAAGGATA ATGAAAACTTAGATTCCGACGTAGAAACGKCCCATTGCAGGAGCTTTATC CAAAATTCAAGTTCTGGTAGCCGTTTGTCATTGTTATACCGAAATACTCC GAGTGTTAGAAAAAAACAAAAAGCCCAATACCGATTGAATCGAAGTCTCC CGATGAGTATTATTGATTCAAAATTATCATCTACTTGTAGTTGTGACAAA GACTTGTCATACGGTCCTATAAGTATTTCAAAGAATGAACAGTCGGAATG TTTATCAAAAGACAGAGGTATTCTCTAATTTTTTGCGTTTTTTAAGAGTA AAAATATATGCGTCAATTTGATTTCAATGATTATAATATTATGCAGATGT ATTCACTTGTATTAATACATTAACATTAATTTTATTCAGCTCCAAAAGGA AAATCTCTGTATACATACAATCCTTATTCAAAAGGGATGGAACCAAATTA TAATCATTATTCGATGGATTCCAGATATGGATATGAAGAAGGAGATGTAC TTAATAAGAAAAATGATGCTGGAATGACACCAGCAAGATCAAGTGAATTT CGTAGACCTGGTGACGAAGGAAAAATTTACCGTATTCTAAATGTTGAAAA ACAATTAACTTATGTTCCTGAAGTTTCTCCAAATAAATTTTGTAAGCCAA ATGCTGTAATAAAACGCTATAGAACCGTTGAAAATCCAATCACCGAATGT GAAAGTTCAAAATATTTTACTGGGTTTGAAAAGGTTTTTCCAAATCCTCT GACTAACCTTAGTATATTTTTCAAAAAAAAAGAAACTATTCCTCCAAGAA TTGAAACAAAAATAAGAACGACTATGGTTAGTGAAATAGTTGATCGAAAG GAAGTTGGAAATGATGCGTACAAAAACTTTATCGATACTCATGAAATTGA TGAAGAAATACCGATTCATTTTACAAAGCTTTCAAAAAAACAAATTGAAA AAAACGACCCAAGAATTCTTAGAGTGGCTGYTGTGATTACAGTGGSACAA AWCAAAAAGGTGACTCCTGAACAACTTCGAAATCGCTTTTAACAATAAGC GCATTATGAATGCAAATTTTTTATGATTTATCAGAATGTTTATTAATTCA TTAAATTTGTCTCGAGTATTCTTCTTAAGTATTGTACGTATTCTACATAA AAAGTTTTATCTTACAGTATATTTCGTGTGCATTCAAAATAAAATATAAA CAGTTCCCAACTTTTATATAAAATGAAAAAAGTAAATAATAATAATTAAT TGAATACAACACTTACAAAAATAGTGCTAATAAATTAAAATGATTTAAAA AAGTAAATTCATGCTAAATGGGGAATAGTACCTACCAATCTAAATCATAT ATGCACTATAGCAACCAAAGTATTTGCTGTATGCATAGCAATTTCATGCA CAGTTATTGAGTAAATTTATGGAAAAGTTATGATGGTACAAAATTCAATA AATTGATGTATTTTTTATCTTTTATTCGTAATAAAATAAAGATAAAATGA TCCCATTATCAAACTGACATAACGTCCATAAATATGCACTAAGTAAACTG AATTACTCAAATTTGAAGTTCATCTAATAATATATCAGCTTATTTCCACT ATTAGCATTTCTTAATCAATGTGTTGTTGTTCAATCATAGTTTTGTGATT TCTATGTCATCTGATTTCATTTTCTCATGTAGAGGTACCATTCGTTTGTG AAAAATGATGGATACAAAGAGTGAAAAAAGTGTCAGTACCAGCATGAGAC CTGATGTAACGTTTGTACCATATATCCTATAAATATAACTCACAATGATC GGCCCAATCACTCTAGCAAATGATCCCGAGGATGCTAGTGCTC
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