EMLSAT00000010448, EMLSAT00000010448-706295 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010448
Unique NameEMLSAT00000010448-706295
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s691supercontigLSalAtl2s691:252473..255158 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010448 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010448EMLSAG00000010448-693214Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000046549EMLSAE00000046549-755477Lepeophtheirus salmonisexon
EMLSAE00000046550EMLSAE00000046550-755478Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775364auto775364Lepeophtheirus salmonispolypeptide
EMLSAP00000010448EMLSAP00000010448Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010448

>EMLSAP00000010448 ID=EMLSAP00000010448|Name=EMLSAP00000010448|organism=Lepeophtheirus salmonis|type=polypeptide|length=873bp
MNNYQFKNLYGTVYRKGNLCFSRDGGTLLSPVGNKISFYNLEHGKSRTLD
YNFRFDVSFMALDPSPSSKTLFVATSNGDLHVCSLEKNVVLHRETTDRRX
LXAKFSPDGKFIAVSKEDTSTLIYEAETFKQPRFGPLGLHKVLQGQMSSV
TKLAWSDNSEWIASGSDSTRIYSLLSDKVYCLGSGSEVVHIAFTDTSPLS
CHTLNSSGHLNQWEISEETEKFTRSSRHFIKDFLQDKNMAFEVTSADYHP
CMDILVAGYSEGSFVVLQLPDVSLIHSLNMNTCISTININCSGDWIALGS
SSAGSLLVWEWKSETYIMKQKGHYNNLESLSYSRDGIMVATGGSDGKVKX
WNSSSGFCFVTFSEHSSPVSGVAFTSNNKALISSSLDGTVRAFDLIRYRN
FRTFASPKPVQFACVAVDATGELIAAGAKDVFDIYLWSLKTGRLLEVISG
HEGPVNSLSFSPSITSSSTLVSASWDQTMRIWNSLESNSTSSEVINLGSD
GIAVAFRPDGLEVAVATLNGQLSIFDLKTGNQIGTIEGKDDLGAGRADSD
LITASKSKESQYFRTLAYSTNGKFIIAGGSSKFICLYHVKESLLVKKFEI
TQNRDLDAMDDVISRKSASEFGNLALVEDRGDDDVMQLPGARKDEKSARS
VHPEIKVTDAQFAPTGREFAITTTEGLLVYSLDVDTVFDPTDLEIDITPS
YVIQQLNRKQYSTALFGSLKLNETKLIRQVIETIPFESSVFILETFPDKY
VNQLLTFFGKELETSRHLEFYSLWIQSFFRFKGGSLIKKNGKELYPCLNL
LQKSLLVRSKDLAQLCDQNSYTASFLLAMGKIKRKKNLSILEKDDGSESM
EENEFELDDIVMGGDEQFVSNWD
back to top

mRNA from alignment at LSalAtl2s691:252473..255158-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010448-706295 ID=EMLSAT00000010448-706295|Name=EMLSAT00000010448|organism=Lepeophtheirus salmonis|type=mRNA|length=2686bp|location=Sequence derived from alignment at LSalAtl2s691:252473..255158- (Lepeophtheirus salmonis)
ATGAACAACTATCAATTCAAAAACCTTTACGGAACTGTTTATAGGAAAGG GAATCTTTGTTTTTCGCGGGATGGAGGAACTCTTTTGAGTCCCGTAGGAA ACAAAATCTCATTTTATAACTTGGAACATGGGAAATCCAGAACTTTGGAT TATAACTTTCGATTTGATGTGTCTTTTATGGCACTGGATCCGAGTCCCTC TTCTAAAACACTCTTTGTGGCGACGAGCAATGGAGATCTTCACGTTTGTT CACTTGAGAAAAACGTGGTTCTTCATCGAGAGACGACAGATCGGCGGRTC CTGGRTGCCAAGTTCTCTCCTGATGGAAAGTTCATTGCCGTCTCGAAAGA GGATACGTCAACTCTCATCTATGAGGCAGAGACGTTTAAGCAACCCCGTT TTGGACCTTTAGGACTCCATAAAGTTCTACAAGGACAAATGTCCTCTGTC ACTAAATTAGCATGGAGTGACAATTCAGAATGGATTGCCTCAGGCTCAGA CTCTACACGAATATATTCTCTCCTCAGTGATAAAGTAATCCATCAATCAC GTCCACATAAATAATTCAAACTAACTTAAACAATTCTTCTCCTTTCAGGT GTATTGCCTTGGGTCAGGAAGTGAAGTTGTTCACATTGCCTTTACAGATA CTTCTCCTCTCTCCTGTCATACTCTCAACTCCAGTGGTCATTTAAATCAA TGGGAAATAAGCGAGGAGACGGAAAAATTCACTCGCTCATCTCGTCACTT CATCAAGGATTTCCTTCAAGATAAAAATATGGCATTCGAAGTTACTTCTG CAGACTATCATCCATGCATGGATATACTCGTTGCAGGGTATTCGGAAGGA TCATTTGTAGTTCTTCAGCTCCCTGACGTTAGCTTAATTCATAGTTTAAA TATGAACACTTGTATTTCAACCATCAACATAAACTGTTCAGGAGATTGGA TTGCCTTAGGATCATCTTCTGCAGGGTCTCTTCTTGTGTGGGAATGGAAA TCAGAAACATACATAATGAAACAAAAGGGTCATTATAACAACTTAGAATC CCTCTCCTACAGTCGTGATGGAATTATGGTTGCTACTGGGGGKTCGGATG GGAAAGTCAAAGKATGGAACTCCAGTAGTGGTTTCTGTTTTGTTACTTTT TCAGAGCACAGCTCTCCAGTTTCAGGGGTCGCATTTACCTCTAATAACAA GGCACTTATATCATCTTCATTAGATGGAACTGTTAGAGCGTTTGATTTAA TCAGATACAGAAATTTTCGTACATTTGCCTCACCAAAACCTGTTCAATTC GCATGTGTAGCTGTAGATGCAACAGGGGAGCTTATTGCAGCTGGAGCTAA AGACGTTTTTGACATATATCTTTGGTCTTTGAAGACAGGTCGATTACTAG AGGTTATTTCTGGACACGAAGGTCCTGTAAACTCGTTATCCTTTAGTCCA TCAATCACATCTTCAAGTACTCTAGTATCTGCTTCTTGGGATCAGACTAT GCGGATTTGGAATTCCCTGGAATCAAATAGTACTTCCTCTGAAGTTATAA ATCTAGGATCTGATGGTATAGCAGTTGCTTTTCGTCCTGACGGACTTGAA GTAGCTGTAGCAACTCTCAATGGGCAGTTATCTATTTTTGATTTAAAAAC CGGAAATCAAATCGGAACTATTGAAGGAAAAGATGATCTTGGGGCGGGCA GAGCAGACTCTGATCTCATTACTGCGTCCAAATCGAAGGAAAGTCAATAT TTTAGAACGTTGGCCTATTCGACCAACGGGAAATTCATAATAGCAGGAGG ATCTTCCAAGTTCATATGTTTATATCATGTCAAGGAGTCTCTTTTAGTTA AGAAGTTTGAAATAACACAAAATCGAGATCTTGATGCTATGGATGATGTA ATATCTCGTAAATCTGCCTCTGAATTTGGCAACTTAGCTCTTGTTGAGGA TAGAGGTGACGACGATGTAATGCAACTTCCAGGAGCACGAAAGGATGAGA AGTCCGCGCGAAGTGTTCATCCGGAAATTAAAGTAACTGACGCTCAATTT GCGCCAACTGGTCGAGAGTTCGCAATTACTACAACTGAAGGACTGCTTGT TTACTCTCTGGATGTAGATACAGTCTTTGATCCAACTGATCTTGAAATTG ATATTACTCCATCCTATGTTATCCAACAGTTAAATAGAAAACAGTACTCC ACTGCGTTATTTGGCTCACTAAAACTGAATGAAACAAAGCTAATCCGTCA AGTTATTGAGACTATTCCTTTCGAGAGCAGTGTATTCATCTTAGAGACTT TTCCAGATAAATATGTCAACCAATTATTGACTTTTTTTGGAAAAGAACTA GAGACTTCTCGGCATCTTGAGTTTTATTCATTATGGATACAGTCTTTTTT TAGGTTTAAAGGCGGAAGTCTCATTAAGAAAAATGGTAAAGAGTTATATC CATGCCTAAATTTACTTCAAAAGAGTTTACTTGTCAGATCTAAGGATTTA GCTCAACTTTGTGACCAAAATTCATACACAGCCTCATTTTTACTGGCTAT GGGTAAAATTAAGAGGAAAAAAAATCTCTCGATTTTGGAAAAGGATGATG GAAGTGAAAGTATGGAGGAAAACGAATTTGAATTAGATGACATTGTTATG GGGGGTGATGAGCAATTTGTCTCTAATTGGGACTAA
back to top
Add to Basket