EMLSAT00000010507, EMLSAT00000010507-706354 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010507
Unique Name	EMLSAT00000010507-706354
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s697	supercontig	LSalAtl2s697:614495..618997 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010507 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010507	EMLSAG00000010507-693273	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000046776	EMLSAE00000046776-755704	Lepeophtheirus salmonis	exon
EMLSAE00000046777	EMLSAE00000046777-755705	Lepeophtheirus salmonis	exon
EMLSAE00000046778	EMLSAE00000046778-755706	Lepeophtheirus salmonis	exon
EMLSAE00000046779	EMLSAE00000046779-755707	Lepeophtheirus salmonis	exon
EMLSAE00000046780	EMLSAE00000046780-755708	Lepeophtheirus salmonis	exon
EMLSAE00000046781	EMLSAE00000046781-755709	Lepeophtheirus salmonis	exon
EMLSAE00000046782	EMLSAE00000046782-755710	Lepeophtheirus salmonis	exon
EMLSAE00000046783	EMLSAE00000046783-755711	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto778907	auto778907	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010507	EMLSAP00000010507	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s697:614495..618997-

protein sequence of EMLSAP00000010507

>EMLSAP00000010507 ID=EMLSAP00000010507|Name=EMLSAP00000010507|organism=Lepeophtheirus salmonis|type=polypeptide|length=538bp
MRFYSKIILLLCVLGEGESWSLYRLQVPSDKNMDNDVXVATKVLQSRNCT
ILKVVKEILCIDFICSSSETFENEFNGTVSSLQSDLSSIVEVAKSFYNSS
TELINDSALLDFESFPRLVELFNDPTQRLLDARAKVNWYIMPLVNPDGYE
FTRTTNRLWRKNRAPPPSGSGCYGVDLNRNWNVSGYGVGASDNPCSEIYK
GPYPDSEPEVKAAKELLSTLKDIHFYLGFHSYGSYILTPFGYTTDLPKDN
ERITRVGHSMRKAIYNLHGRNYSVGSPANIFYVAGGASDDYSKLSGIPTS
MTIELPEVNGGGFVLPPNKIKEIGKEAWASILPVSIHVVEHEDQEAYLNA
MSKYRKGESEERTQKVQQAYEVLSDSHERSWYDINRDEILKINLAPSTQS
LLDLTPYFLETCFDSLEDFYVVYSKVFNNINLEDKIFFGTNRLKYPSFGD
YSSSKEVWNKFYHFFENYSSALAFQWLRKQNPGSIERLKSTPSQMRIKRN
ETVKALAQYIRSKDHRCIRRRFRRISLINLSDKLSPKS

mRNA from alignment at LSalAtl2s697:614495..618997-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010507-706354 ID=EMLSAT00000010507-706354|Name=EMLSAT00000010507|organism=Lepeophtheirus salmonis|type=mRNA|length=4503bp|location=Sequence derived from alignment at LSalAtl2s697:614495..618997- (Lepeophtheirus salmonis)
ATGAGGTTTTATTCAAAGATAATACTCCTTCTTTGTGTCCTTGGAGAAGG
AGAGTCTTGGAGCCTCTACAGACTTCAAGTACCTAGTGATAAAAATATGG
ACAATGATGTCRTTGTAGCTACTAAAGTTCTACAGTCCAGGAACTGTACT
ATTCTCAAGGTTATTTACTAGACTCTAGAGTATTCATTTTTGTTTTTTGA
TGAGTCTGATTCATTATGCAAAAAACATTTATTCAGGGCACACCAGATGT
GAACTTAGCATTTAGTAATCCACATGTTTACTTACTTAGTCGTCAGAAAA
TAAAATAAATAAACTAATTGTGTTTTAACTTTTTAGGTGGTCAAGGAAAT
ACTTTGTATTGATTTCATTTGTTCCTCTTCAGAGACTTTCGAGAATGAAT
TCAATGGAACGGTGTCTTCTCTTCAATCAGATTTGAGTTCAATCGTCGAA
GTAGCAAAGAGTTTCTACAACTCCTCAACTGAATTGATAAATGATTCTGC
ACTGCTGGACTTTGAGTCCTTTCCAAGGTATGTTTTATCTGACTGATCAG
CATTTGTATACATATTACATATGTGCTCTGAGTACATTGTGTATCTATTC
AAGCTATGAAGAATTGGAAAAGTATTTACTACACCTGAAAAAAAACTTAC
CCACAATTAATTGAGCTCAAAGTAGTGGGCAAGACGCATGAGAATCGATC
CCTCTATTTCCTGAAAATCGGACAAATCTATGAACGCATTGAGAAAAAGG
CTGTCTTTATTGATGGAGGTAAAAAGAATTTCCTTCATTCAATCAAGTTC
TCTTATACTCATTTTCCTCCAAGTTTTAATTAGGAATCCACGCTCGAGAA
TGGGGATCTGTCTCCTCTGTTGCATACATCATTTCAAGACTTGTTGAATT
ATTTAATGATCCTACTCAGAGGCTCTTGGATGCGCGAGCAAAAGTCAATT
GGTATATAATGCCACTCGTTAATCCTGATGGCTATGAGTTTACTCGTACA
ACTAACCGACTTTGGAGAAAGAATCGAGCTCCCCCTCCATCTGGAAGTGG
TTGCTATGGAGTTGACTTGAATAGAAATTGGAACGTAAGTGGCTATGGAG
TTGGTGCAAGTGATAATCCCTGTTCTGAAATTTATAAAGGTCCATATCCA
GATTCTGAGCCAGAGGTGAAGGCTGCAAAAGAATTATTGAGTACTTTGAA
AGACATTCACTTTTATTTGGGCTTTCATTCCTATGGTGAGTTCTTCTTTT
TTGGCCTTCTCAGTTGTTAATGACTTGCACATATTTATTTAGGGTCCTAT
ATTTTAACTCCGTTTGGTTATACAACTGATTTACCTAAAGATAATGAGAG
AATCACACGTGTGGGACATTCCATGAGAAAGGCAATCTATAATCTCCATG
GTCGAAATTATAGTGTTGGATCTCCTGCCAATATATTTTATGTAGCAGGT
CAGTAATAGGCAAATCTACATACAAAAGGTATTAGATATCTACTGACACA
CTCTTTTTCCCTTCTTAGGAGGAGCAAGTGATGATTATTCCAAGCTCTCT
GGGATCCCAACTTCCATGACGATTGAGCTACCAGAAGTGAATGGGTAATT
ATTAAGTCCTCATTGTATAATATGTATCTTGACTTTTCTAATTTTTAAAG
TGGTGGATTTGTTCTTCCACCAAATAAAATCAAGGAGATTGGAAAAGAGG
CATGGGCCTCTATTTTGCCCGTATCCATTCATGTGGTTGAGCATGAGGAT
CAGGAAGTAAAAGATTCCTTTTACGTCATCAAAAAGGATTTATTATAGCT
ATATATATTTAATATTTATCATCTTGGATCGATTGATATCCTGTTCTGAT
GTGCTGTCTTTCATAATATTTTAGTATTTAGTGTCATTGAATAAATCCTT
AGAACATATTTTTTGTAGAGATTATTGAGTTGATTATAATCATTATTCAT
GTTGTAATCAGGATATTAACTCCTTAAGTAATTAAGTAGCTCTATTGATA
TAGTTATACTAACTAAGAAGATATCTATCTCGATGGATATTTAATATTTG
TTAACCTGTAGAATGTACATGGATAATAAATATCACAATGAAAGTACATT
ACTTTCTAAATATTCTTGACGCTTCTCTTTCAAAGGCAAAAAATAAAAAC
AAAATGCAGAAAATCCTGCTTTTCTGCTGGTACTTCTCTCTTTTTAAATA
CGCCTCTTTCATGGTTCTCATATATATATATCTCCTAGTCTTTTTTTGAG
TATCACACTACCAATATATAAATATTTTACTTACCAACTCACTCAGTTCA
CCTAAATTCTTTGCATGTTTCCTTTCTTTCTAAATAACTTTTTCCCTTCA
CTAACTCTTTTCAAATCCACAAGTCACATACAATCTCTTCTTCATTGAGT
TATGGAGTGTTTGTATTCAACCTTAGGAGTATCTCCGAACGCAAAGGCGG
AGGACATTAAAAAAGTAAGCTCAATAGGTTGCGTGAGGGATATTATTTTT
TAAATGTGTTGCGAGTGATTTTGTAGTTGTAAGTCGATCCCTTAGTGTAA
TCAATAATAGCTTCCATAGGACTAATCTATTGAGTTCAAAAGGATAAAAA
GACCCTTACTAAGATATACACATATTATGACATATATGATTAGTTAGCAC
AACTAATAATAAATATGATATCAGAACTTACTTTATTAATAGACTCACTA
TTGAAAATTCTATCTTGACAATTTTTGTTAAAGTTGACAAAGATTATTAT
GTACATACAAAATAAGTAGACAATACCAATTTATTATAATATATTGACAT
ACATATATATTATTTTATATAAAAGCACCTTTTAACGAGAAAAAATTAAA
TAAATGATACAATACGTTAGTTATATACTTTTTCAGGACTAAGTTTATGA
AGGATGCACTCCTATATTTTAATGAGTACAGCTTGATGAAAGGAGGAGCC
TTTCAAATACTCCATTAAATATAATACAATATATTAATTACAGGCCTATC
TCAATGCTATGAGCAAGTATCGAAAGGGTGAAAGCGAGGAGCGAACTCAG
GTATGCAACACATATCATTTCTTCACTGTATAACCTCTTACCAACGAAGA
GGGATCAAAATCTCCTATTATAAGTAAGTATTTCTTGGAGTAGTTAAAAT
AGATAAATTAATTTTATATAAATCAAGGTTAATAGAAATATTTTTATTAA
TCTATTATTGCATTTCTATTAACCTTGATATAAATTATTTTTTCGCCAAA
AAAAAAATCAATCCTATATTTGTTACTTAATTCTATTTATTCTTCTTTCT
TTAATTCCAAAGCAGCAGCAGGAATTAAATAATGAGAAAGGGAAAAGCCT
TTTCAGATAATAAATCAAAAACGTAGCCAGATACACAATTATTGTTGATG
TTTTTTTATTCATACAGAAAAAGCTACTACATTTATTTATTTGCTGATAG
AAAGAGGGGAAGGGGGTTTATTATATTCGAAGGAAAGATGTTCCCTTTGT
ATGTTATTATATCTTAAATATAGGTAATAATAGTAGGTACAAAGTAGTTA
TGTGAGTTTAATTTGATTTGAACCRCCCCCCCCCCCCTCCTTTATTTTTT
ACTTCTCTCGCTCTTTTTTTCTATTTTTTCTCTTCTGCAACTGGTAGTAA
TACTAATAAGTAAAGTAACTGTTGAACGTGTGTAACACTTGATATTAACT
ACTTATCACATTAATATTATTTCTTATATATTTAACTTTGTTCAAACTTT
TCTTTTATTCAAATACTGTTTACCTAATATTAATATATGGTATGCTACTA
CTCAACAAAAGCGGATTTTCTCTGTTTTTGTAGCACTCTTCATTGAAAGA
AAGATAATAGCCAATAAAAAAAGTGTGTTTTGAGGCCTGAAGTAGAGAGA
CTATAAGCATTAAAGCCTTACTATATACTAATACTGTATCTTTGTATATA
CCTGATTCGCCATCTGACTTTTTCTTAGAAAGTTCAACAGGCATATGAAG
TATTGTCGGACTCTCATGAACGCTCTTGGTATGACATCAATCGTGATGAA
ATCCTTAAAATTAACCTTGCACCCTCAACTCAAAGCCTCCTTGATTTGAC
TCCCTACTTTCTGGAAACCTGCTTCGATTCCCTTGAAGACTTTTACGTCG
TCTATTCCAAGGTTTTCAACAATATCAATCTTGAAGACAAAATATTTTTT
GGAACTAATCGACTTAAATATCCCTCATTTGGAGACTATTCGTCCTCTAA
AGAAGTTTGGAACAAGTTCTATCACTTTTTTGAAAACTATTCATCAGCTT
TAGCCTTTCAATGGCTCAGAAAACAAAATCCTGGCTCCATTGAACGACTC
AAGTCCACTCCTAGTCAAATGAGAATCAAAAGAAATGAAACTGTGAAGGC
TCTTGCTCAGTACATTAGATCCAAGGATCATCGATGCATAAGGAGAAGAT
TTCGGCGAATCTCTCTCATTAATTTATCAGATAAATTATCCCCAAAATCT
TAA

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