EMLSAT00000010613, EMLSAT00000010613-706460 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010613
Unique NameEMLSAT00000010613-706460
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:297106..300420 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010613 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010613EMLSAG00000010613-693379Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047295EMLSAE00000047295-756223Lepeophtheirus salmonisexon
EMLSAE00000047296EMLSAE00000047296-756224Lepeophtheirus salmonisexon
EMLSAE00000047297EMLSAE00000047297-756225Lepeophtheirus salmonisexon
EMLSAE00000047298EMLSAE00000047298-756226Lepeophtheirus salmonisexon
EMLSAE00000047299EMLSAE00000047299-756227Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776024auto776024Lepeophtheirus salmonispolypeptide
EMLSAP00000010613EMLSAP00000010613Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010613

>EMLSAP00000010613 ID=EMLSAP00000010613|Name=EMLSAP00000010613|organism=Lepeophtheirus salmonis|type=polypeptide|length=368bp
MELLKKSKLFEEEPRFNKNLASILITELIWGKGKLPATSRPLEIMLKRQK
QLKALSKELCFSQKVKIVKPRWARVNTFKISFDDALKHFVEMDGLNYLEY
DQDTKYQDFLEKVRLLEPYEFMCDLHVDNLLVFHPKTAFYSHELYLNGSI
ILQDKASTLPIQALNVKEGSIVMDACAAPGNKTTQIASCVGLNGGVYAIE
RDEERIQILDQTLERAGIHKSLVKVCNIDFTTLNPDDFPDVEYIVLDPSC
SSSGILSDVTIGNRLSKLSAFQFKMLEHALKFPNVSKISYSTCSVHKIEN
EEVIEAIVKKHPHFKVQHVLKKWPTRGLNEYPHGDKFVRATFETDLCSGF
FVAILKRIKMKKMNRKED
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mRNA from alignment at LSalAtl2s705:297106..300420+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010613-706460 ID=EMLSAT00000010613-706460|Name=EMLSAT00000010613|organism=Lepeophtheirus salmonis|type=mRNA|length=3315bp|location=Sequence derived from alignment at LSalAtl2s705:297106..300420+ (Lepeophtheirus salmonis)
TTTTAACCTGGTATTGCTACAGATATTACCTTAAGCATTTTTCTACTAGT
CAATTACAAAATAATATCCAAAATAAAGTTTTGATTGAACATTTCATCCG
TTAAAGTTAGGAATCATCTCCTTGGTAGAGGATTTTTTAGCATAAAAAAT
ATAGTTCCCCCCTTCATGAGGTTAAGTGATTGGTCCACTCCAGATATTAG
TAGAACTCATTGTCACTACAGCCTACAACACGAAAAATAACAACATGGAA
CCATCTGCATTTCGACATTCCGTTAGGGTTCCGAGGCTTTATAAGGTTGC
AAGTCATATATATGAGGATCACATTAATGGTATACTCCCTATCTTTGTTA
TTCAATAATAATTAATGTGTTTTATGTCCCAAAAATACTAGGGAAGGGAA
CGATTAAGAATTTAATCCATAACACAAAACNNTCCTAATATCGGTGCATT
ACTATCATTAGTAACGGAGTGTGTTGCTAAGCGAGATGAGATTACGGTAC
GCTCAAGATGGTATTGTTGACGGRATAWKAAWYCATGWAGAACGTMATGA
TAATTAATTAATTATCATCCAATATATATATACATTTCTTTATTACAGGA
GCTGTTGAAAAAGTCGAAGCTGTTTGAAGAAGAGCCAAGGTTCAATAAAA
ATTTAGCTTCTATACTCATTACTGAACTTATTTGGGGCAAAGGAAAACTT
CCTGCTACTAGTCGACCCCTCGAAATCATGCTTAAAGTAAACATGATTTT
TAATAATATGTGCTTAATTATTTACATGAACCATTATATTTCTTAGCGTC
AAAAACAATTGAAAGCCCTCTCAAAAGAACTTTGCTTTTCTCAAAAAGTC
AAAATTGTAAAACCTAGGTGGGCAAGAGTCAATACATTTAAGATCTCTTT
TGATGATGCTCTAAAGCATTTTGTGGAAATGGATGGCCTTAATTATCTCG
AGTATGATCAGGATACTAAGTATCAAGATTTCTTGGAGAAAGTGAGGCTC
CTCGAACCGTATGAGTTCATGTGTGACCTTCATGTGGACAATTTATTGGT
CTTCCATCCCAAGACAGCCTTCTATAGCCATGAGCTGTACCTGAATGGTA
GCATAATACTACAGGATAAAGCTAGTACTCTTCCAATTCAAGCCCTTAAC
GTCAAGGAAGGATCTATAGTTATGGATGCATGTGCTGCTCCAGGGAATAA
AACAACGCAGATAGCGAGTTGTGTCGGTTTAAATGGGGGAGTCTATGCTA
TTGAGAGAGATGAAGAACGGATACAAATCCTTGATCAAACATTGGAGCGT
GCAGGAATCCACAAATCCCTCGTTAAAGTTTGTAATATTGACTTTACGAC
TCTAAACCCTGACGATTTCCCAGATGTTGAATACATTGTTCTTGACCCAT
CATGTAGTAGTTCAGGTATACAGTTACTGTTTACTTGACTTTTTAACATT
TAGTTGATCTTTTCTCCGTCACTTCAAGGTATTTTGAGCGATGTAACAAT
TGGAAACCGTCTTTCAAAGCTCTCAGCATTTCAATTTAAAATGCTTGAAC
ATGCACTCAAATTCCCTAACGTTTCAAAAATATCCTATTCCACTTGTTCA
GTGCACAAGATAGAGAATGAGGAAGTGATCGAGGCTATAGTTAAGAAACA
TCCACATTTTAAAGTCCAACATGTCTTAAAAAAGTGGCCTACGAGAGGAT
TAAATGAGTACCCACATGGTGACAAATTTGTTAGAGCCACATTCGAAACG
GACTTGTGCTCCGGTTTTTTTGTCGCCATTTTGAAAAGGATAAAGATGAA
GAAAATGAATAGAAAGGAAGATTGATTTGTTTCTTATTTAAAACTGACTT
TTATGTGCATTCGTACGTGATATAGAATGAATATATAGATATATAAATAA
TACGTAATCTGTTTATATATTAAATTAAGCTCGTTAACAGCTTGGTCAAA
GTAAAATAATTTAAAAGTGTAATGATGATAAATTCAAGAATTTGGTTCTT
TTTTAAATACAACTTTTAGTCAACAGGTAAAATATCACAGTCATAATCCA
AGGAGCACCGATCATTTCTATCAACAGCAGAAGACTTGATCGTAGAAAAC
CATTCACCCCATGACTCCGGTATAACGTTATCAACGAGCATAACAAGCAT
TTCAAGGCCAGGAACATTTCGTTTAACGACTTTCGTAGCTTGGCAAGTGA
GTCTTCTTCTACAGTTCTGTTTATCCATAAATGCTCCAACACCTACGCTT
AGTGAATTAAAAATATAGTCTGTATCTTCTTCTTGGGGATCTTCCATTGT
TCTTTCATTGGTTCCACGTCGGAAACGAGCGCGAGCGCTCAGATCCGCTA
AGGCTTTCGATAGAGCCTCCATTAGAGAATAAAAAGATTCTTGAAATAAA
TCTTGAACAACTTCACGAATAGAGCGGGAATTGCTCTCCGCCATTTCTTG
AGATTTGAAAACTTTTTTTGCTCCTTCGAGCTCATCGTCAGATGTCGGAT
CTTCTATTATAGCGGCTTGAAAACGGTCAAAAACACTATTCGACTTTAAA
AAGTCATCCTCAGGGATTCTGCTCATAATGATGGTTGGCGCTACAGATAA
GGCCATAAATAGTAATATAAAAATGGAATTCTTCATTTCTGACTTTGAAT
TGCTGCTGTCACTTCACAGAAACTATAAATTGACGAAAGGTACTACCCAC
ATTCGATTATTCTACATAACCTTCATTTTCATAACCCGTTTCTAAGAAAA
TTGATGGTAAATTTTTATATCGAAGTTATAAACAAGTTAACATCTTTTAC
CTTCTTTTAGAACACGATAATCAGACAATATTTCTTCATCCTTCCCACTA
CTGCTGTGGTATTTCATATTGATAAAATCCTTGATGGCCTGATAAACAAG
TTTATATTGGGCCTGAAATATTAGATTTGACTCAATAATATACACGACAA
TGAATAAATTCATTTCAACTTACTACACTTTGAACCATTTTTTGTCTTTG
CTCTCGAAGATGTTTAACTGTGGATAGTACATCTATTTCCATGAGAGCAT
CATCTAAAATTTGTTCACAAATCATGTGTACAGCTATCAAAGTTCCAGTT
CTACCAACTCCGGCACTACAGTGTACACATATTGGTGATGATGAATATTC
TGGGTCGATGAATTCATTTTCTAAATGTTTTCTTGAATATCTAATAATAC
GACATGTTTCGAGTAGAGGAAATGTAGACTCAGGGACACCATGATCAGGC
CATGATGTCAAATGAATTTGAGTAACAAAATGGCATTTTTTATCCGAATC
TGGGGTTCCCTGTAA
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