EMLSAT00000010621, EMLSAT00000010621-706468 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010621
Unique NameEMLSAT00000010621-706468
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:346421..349290 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010621 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010621EMLSAG00000010621-693387Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047335EMLSAE00000047335-756263Lepeophtheirus salmonisexon
EMLSAE00000047336EMLSAE00000047336-756264Lepeophtheirus salmonisexon
EMLSAE00000047337EMLSAE00000047337-756265Lepeophtheirus salmonisexon
EMLSAE00000047338EMLSAE00000047338-756266Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776648auto776648Lepeophtheirus salmonispolypeptide
EMLSAP00000010621EMLSAP00000010621Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010621

>EMLSAP00000010621 ID=EMLSAP00000010621|Name=EMLSAP00000010621|organism=Lepeophtheirus salmonis|type=polypeptide|length=733bp
MSVLRECAHVESCVGPVTGFLKSLRVNNNISTSGEEPILKCDDCGFKGRN
LWLCLYPNCLAIGCSKFEEKDDSEDHALTHYEDNSSHALQLNLKSRKVWC
FECEREVKNVLSPPRSNPQRQQLYSSSSKKERSYGDQITSDGLMGLANLG
NTCYMNAALQCLSNTPSLTEYFISCFYPKAHSPLSGKSNSLSKSYCSLML
EMWTKKRSSYVVPSGVVRSIKAAHPIFQGYLQQDSQEFLRCFMDTLHEEL
MESFIAEEEDEENNNSNSNNAHEDSSEEMESEEGEEAESVSEVGDYETAD
SGLSEDGNLPEEEEGKSSIRGGGTSPVVGASGKQMLMPFSNSLAHNGRRN
AESKKRKKVYKSIISDIFDGKLISNVQCLTCNRISTTEETFQDLSLPIPN
QESVTSNATITNNASQGWLSWIWSYFVGFVYGPKVSLGDCLSYFFSADEL
KGDNMYSCEKCKKLRNGLKYSKVTILPDTLCIHLKRFRHEFAYSSKISSK
VTFPLVDLDMSPWCHKDFGSKETFYELTGVIVHSGTASGGHYVAYCLNNV
DQEWYEYDDSIVTRVDPSCVLGLEAYVLFYRKSNDRMDSIRDQIQNILIR
SQSQESSLMQFYVGKEWYNKFENFAEPGPIDNSSFLCIHSGVFPHKYQVI
NDLTIPLPQIVWEKLHRTFGGAPPCTRLYECSVCKAEQQSLMKQKSFESN
EFKRLYYEFKAQFFNKYDVRSKRRDHYTVESIY
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mRNA from alignment at LSalAtl2s705:346421..349290-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010621-706468 ID=EMLSAT00000010621-706468|Name=EMLSAT00000010621|organism=Lepeophtheirus salmonis|type=mRNA|length=2870bp|location=Sequence derived from alignment at LSalAtl2s705:346421..349290- (Lepeophtheirus salmonis)
ATGTCAGTCTTAAGGGAATGCGCGCATGTTGAAAGCTGTGTAGGGCCTGT
CACGGGGTTTCTCAAGTCTCTTCGAGTGAATAACAATATTAGTACTAGTG
GTGAAGAGCCGATTTTGAAATGCGATGACTGTGGGTTTAAGGGTAGAAAT
CTTTGGCTCTGTCTCTATCCCAATTGCTTAGCTATTGGGTGTTCCAAGTT
TGAGGAGAAGGATGACTCTGAGGATCATGCACTCACTCACTATGAAGACA
ATTCGTCTCATGCTCTTCAACTCAATCTAAAATCTCGAAAGGTTTGGTGC
TTTGAGTGTGAAAGAGAGGTGAGGATGGGATTTCCGAGGATTTGCCTGCT
TACTCCTGCTTACTCATTCATTTTTGTTATTCAATTTCATTCCAGGTCAA
AAACGTTCTCTCTCCCCCTCGATCCAATCCTCAGCGCCAACAGTTGTACT
CCTCATCCTCGAAGAAGGAAAGAAGTTACGGGGATCAAATCACTTCTGAT
GGTTTAATGGGACTTGCCAATCTGGGAAATACCTGCTATATGAACGCTGC
CCTTCAATGCCTTAGCAACACACCTAGTCTCACAGAGTACTTTATTAGCT
GCTTTTATCCCAAAGCTCATTCCCCACTCTCGGGGAAATCGAATTCCCTC
TCCAAGTCCTACTGTAGTTTAATGCTTGAAATGTGGACCAAAAAAAGGAG
TAGCTACGTCGTTCCTAGTGGAGTCGTCCGCTCAATAAAAGCTGCGCATC
CCATTTTTCAAGGATATTTGCAACAGGACTCCCAAGAATTTCTAAGATGC
TTCATGGATACGCTTCATGAAGAACTCATGGAGTCTTTCATTGCTGAGGA
AGAAGACGAAGAAAATAATAATAGTAATAGCAATAATGCTCATGAAGACT
CGAGTGAGGAAATGGAGTCTGAAGAAGGTGAGGAAGCTGAGAGTGTGTCT
GAGGTGGGAGACTACGAAACAGCAGACTCAGGACTTTCAGAGGATGGTAA
TCTTCCAGAAGAGGAAGAAGGTAAATCTTCAATTAGAGGAGGAGGAACGA
GTCCAGTGGTTGGTGCAAGTGGCAAGCAAATGTTAATGCCCTTTAGTAAT
TCCCTTGCTCATAATGGTCGAAGGAATGCCGAGTCCAAGAAGCGTAAAAA
AGTGTATAAGAGCATAATTTCGGATATATTTGATGGAAAGCTCATTTCGA
ATGTTCAGTGCTTGACGTGCAATCGTATATCTACCACAGAAGAGACCTTC
CAGGATCTCTCTTTACCAATACCTAATCAAGAATCAGTTACTTCAAATGC
TACTATCACCAACAATGCGTCTCAAGGATGGCTCTCCTGGATATGGTCTT
ACTTTGTGGGATTTGTGTATGGTCCGAAAGTGAGTCTAGGGGACTGTCTC
TCTTATTTCTTTTCTGCAGATGAGCTAAAAGGGGATAACATGTATAGTTG
TGAAAAGTGTAAGAAGCTGAGAAATGGCCTGAAGTATTCAAAGGTCACTA
TTCTACCAGATACTCTTTGCATTCACCTTAAGAGATTTCGGCATGAGTTT
GCGTATAGTTCGAAAATCTCGAGTAAAGTCACATTTCCTTTAGTTGATCT
TGATATGTCCCCTTGGTGTCACAAGGACTTTGGTTCTAAAGAGACTTTTT
ATGAACTTACTGGTGTTATCGTTCATTCAGGAACTGCATCTGGGGGCCAT
TATGTCGCCTATTGTCTTAATAATGTAGATCAGGAATGGTACGAGTATGA
TGATTCCATTGTTACTCGTGTTGATCCTTCTTGTGTCCTGGGGTTGGAGG
CCTATGTTTTGTTTTATAGGAAAAGTAATGATCGAATGGATAGTATTCGA
GATCAAATACAGAATATTTTGATTCGTTCTCAAAGTCAGGAATCTAGTCT
GATGCAGTTTTATGTGGGCAAGGAATGGTATAATAAGTTTGAAAACTTTG
CTGAGCCAGGTGAAAAAAACATAAGAGAAGCGAGTTGTTCATATTTTTTA
ATTCTTTTTTTTTAAGGTCCCATCGATAACTCTAGTTTTCTATGCATTCA
TAGCGGAGTATTTCCCCACAAATATCAGGTTATTAACGATTTGACTATAC
CATTGCCTCAAATAGTTTGGGAAAAACTTCATAGAACCTTTGGAGGAGCT
CCTCCTTGTACCCGTCTCTATGAATGTTCTGTCTGCAAGGCTGAGCAACA
ATCCTTGATGAAGCAAAAGTCCTTCGAGTCGAATGAGTTTAAGCGCCTCT
ACTATGAGTTTAAAGTCAGTAGTTTTTATTCCCTAATTTTTTTCAGTAAT
CCATTATATTCTTACAGGATAAGAAGAGTGGAGACGTCGTTTATTACTTA
AGTTCCTCTTGGTACCGCAAATGGGAAGACTTTGTTCAGGGTCGTCAATT
GGAGCCTCCTGGACCTATCAATAATAAAAACTTAACTATTACTCGGAACG
GTATATTAAACTTTTCCCCAAGCTCTGATCATATAGAGATCTCTCCAAAC
ATATGGAACTTTTTCCTAATAAATCATGGAGGAGGACCCGAAATTTCCTT
CTATCCTTCTACAGGTTTTATGATAAACTCTACTTACAGACCTCCTTTAC
GTCAAAGAACGTCCTCTGAAATCAGTAATGATTCAAATACCACGACCCTT
CATTGAGCTTAAACTCCAATTTATACTTTAGAAAAATTGGAAAATTGTTG
TTATTGTTTTTTTATGAAAAGGCGATTCTTTTTAAAAAGTTTAATCATTT
ATTTGAGTATATATATATAGGATTACATACTTTTATATTAATTTCTAGGC
CCAATTTTTTAATAAATATGATGTACGGAGTAAGAGGAGAGATCATTACA
CAGTTGAAAGCATTTACTAA
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