EMLSAT00000010654, EMLSAT00000010654-706501 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010654
Unique NameEMLSAT00000010654-706501
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: survival, reduced
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
Q F122 UN30_g17511 female
  1. PreAdult2
  2. Adult
Reduced survival
survival, reduced
10.06.2014 - 13:35
22.04.2014 - 00:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s705supercontigLSalAtl2s705:72673..76980 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010654 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010654EMLSAG00000010654-693420Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000047473EMLSAE00000047473-756401Lepeophtheirus salmonisexon
EMLSAE00000047474EMLSAE00000047474-756402Lepeophtheirus salmonisexon
EMLSAE00000047475EMLSAE00000047475-756403Lepeophtheirus salmonisexon
EMLSAE00000047476EMLSAE00000047476-756404Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771415auto771415Lepeophtheirus salmonispolypeptide
EMLSAP00000010654EMLSAP00000010654Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010654

>EMLSAP00000010654 ID=EMLSAP00000010654|Name=EMLSAP00000010654|organism=Lepeophtheirus salmonis|type=polypeptide|length=355bp
MRIXAVSKALAVLIWTSTSFLTVLASYRQYHMDNADICTSSRNDKIHLGT
GASLFLLESPSIRIQPNEHHTASRCEIHVEAPKDYGIAVHVENMRLRQKA
SGACVDYIRFGQDDNVPFYTMSKSDRLCGSEPGFAYDDSKGDLLIWISLG
GRKATHSWPDISVVNLTLIVTAYKINCIEPDQTQIKCKDSDRCIWNKYVC
DQHFNCPGDISPADEVGCTYDGLQVTSFVKNRKLNYKLLPFTLFVLAFGL
ITCLSAIFLVKQRHKCCFRPSTSSGSCDLPEQTVFSLRELSNTERQTLEN
VYLPLNSLVQVPPTGGMHTEIGGGEGPPPAYDDLFPENIGEDTLSNGNSL
SSPSP
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mRNA from alignment at LSalAtl2s705:72673..76980+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010654-706501 ID=EMLSAT00000010654-706501|Name=EMLSAT00000010654|organism=Lepeophtheirus salmonis|type=mRNA|length=4308bp|location=Sequence derived from alignment at LSalAtl2s705:72673..76980+ (Lepeophtheirus salmonis)
TCGAAATACCTCTTGGAACTTTTCAGCACTATTGTCTGACGTCATTTATT GAGTTTAATTATTAGTGATAGACTGTGAGCTGAACAGAGTCGAATTCCAT AATTATTCAGTATAATAATTTATTATTTATTAAATCAACTGCGAAAATAC CAATTTGTGTGACGAGTAGTTTTAATCAATTAATAAATGAGCAAAAAAAT AAGAATAAATGGATTCCCATTCTGGGCCTGGGAATGAAGCGTGGACCTAT GACATTTTCACTCCTTTTAAATAATAATAATAACTAGCAGGAAAAGGGCG GTAAAGTAGATGTAGAAACTGAATCATTATTAATTAATATTTTATACTGA GAAGGTAATAAGTAACAGTAATTTCAGCTTGGAAGGAGATTCAAAGTTCA CATTAATCGTTATTATCATTTTACGAAGCTGCTCAAGATCCTAATTAGTA ATTTATATCATTATCATCTCGTTGATATCTCTTTGAAGAAGGAAGATAGA ATGAGAATGGAAATGACGGAGTTGCATAAGGATTTTGGAACTTTTGCAAA CTCTGTTATTGTGGCGGAGAAGGAACTGGATAAATTGGAAAGCAAGTTCA AGTCCAATATGAGTGGAAAGGATTTCATAAAGATTTTGAGTCAAGTGAGA GCGTTACAGAAAATGGATTTGAAGGCAGAGGTGAGAGACGAGAATTTGCG AAGTACTACGAGTTCATGAGAATATTAATTAATAATAGGTGGATCACGTG CGAAAAATAGAGAAAGAAACAATTGAAAGAACACTGGATGATATGACTTC TTGTTACTCGGCGTCGGAAGACTTTCAAAGACTCCTGAAATATGAAGTTC TTCCAAGACATAGTGGTAGACAAAGAGAGCAGCTAGATAAATGATCATTG ATTAGTAAAATCCATCATTCACGACATCATCAGTATAGCTTCTGAGTTCG AGTTTATGTTTTTGCGTTTTTTAATAGATTAAGATACCTACTTATATATT AAAATTATTATTATATGATGTACGTACATACATACATCAAGTAATAATAT ATTATCCTAAGCTGCTGTCAGCTTGCTTAGCTGACTTTATTTAATAACAA AATATTAAATAGAATAATAATAACACTTGACTCGCATGTACATACATTTC TGATTTTATTGAATTTGTTATAATAGTCATTCGCTCAATACTTACTGACA CTACTTCTTGTTCTAGTATTACAGAGTGATTCTGCATGAGACTTGATTCA TTTCCCCTTTTTTCATATTGTAATCTTTTTATGCTAGTTCTCTCTAACAC AGCCCCCCCCCCTAACCTCCCATCTTAGGCATTCCTTTATGATTCGATCT ACCCAACTGACAACTACTCTGTCTACTTCCCATTGATTCCACTTGAATGA AGGACGAGCTCTTTTTCGCTAAAAGTACACTTATCGGAGAATGTAATGAG GATTSCAGCCGTTTCCAAGGCCTTAGCTGTCTTGATATGGACTTCCACCT CCTTCCTCACCGTACTAGCCTCCTACAGACAGTATCATATGGATAATGCA GACATTTGCACTAGTTCTCGGAACGATAAGATCCACCTTGGAACCGGAGC CTCTCTTTTTCTTTTGGAGTCTCCTTCCATTCGCATTCAACCCAATGAAC ATCATACAGCCTCTCGCTGTGAAATTCATGTAGAAGCACCCAAAGACTAT GGCATAGCAGTGCATGTAGAAAACATGCGACTACGTCAAAAGGCTAGTGG GGCATGTGTTGACTACATTCGCTTTGGCCAAGACGATAATGTTCCCTTTT ACACTATGAGTAAAAGTGATCGTCTATGTGGATCTGAACCTGGCTTTGCC TATGATGATTCTAAAGGAGATCTTCTTATATGGATATCCCTCGGAGGGAG GAAGGCAACACATTCTTGGCCGGATATCAGTGTCGTTAATCTTACTCTCA TCGTCACTGCGTATAAAATTAATTGTATTGAGCCAGATCAGACTCAGATT AAGTGCAAAGATAGTGATCGCTGTATCTGGAACAAATATGTCTGCGATCA ACATTTTAACTGCCCAGGTGATATAAGTCCAGCAGATGAGGTTGGATGCA CTTACGATGGACTCCAAGTCACTTCCTTTGTCAAAAACAGAAAACTCAAC TATAAATTGCTTCCCTTTACACTCTTTGTGCTAGCTTTTGGTCTCATTAC ATGTCTTTCTGCAATATTTCTCGTCAAACAAAGACACAAGTGCTGTTTTA GACCCTCAACTTCTAGTGGAAGCTGTGATTTACCAGAACAAACAGTTTTT TCACTTAGAGAACTCTCCAATACGGAACGACAGACTTTAGAAAATGTATA TCTTCCACTCAATAGTCTTGTACAGGTACCTCCGACTGGGGGAATGCATA CTGAAATCGGAGGTGGCGAGGGTCCTCCACCCGCTTACGATGATTTATTT CCTGAGAATATTGGAGAGGATACCCTCAGTAATGGGAACTCATTATCATC GCCATCACCATAGGTTCATTCACTTACAGATATCATTTCCATCGTCCGTC CTCTCCACAAAGAAAATAACCATACCTAGTTATCAGTTCTAGCACTTATT ATACATCATTTGTCAGATGTAGATAACAAGTTGCCTCATTCTTCTAATTC CCTGTTGTAATTATACGTCTACCTCTTCGTACTTTTTGTACTTCTTACGA AGATCCATAAATCCACTATTTCAATATGTGTGTATATATTTACATGCATA ATATCTAAGGTTTTATTTGCCTTCTCACCCAAGATTTGATTATCTTCTTT TTCAAACTTTTTTTCTAATTAGTATAATAATATATTATCTACATATGTAT ATATAGAGATTTACACTTATAGCATACATATAATATTATGTATATAATTT TATTTTTCGATTGCATCTTCTTTTTTCTCTGCCTATGAATGGGTATATCT GATTTGTACATATGCACTTCGTGCTCTTCTACTAATCAAAAATCTATGTT TTTTGTTCTTTATCATAATTATTATTAGCCTATCAATAATGATTATTATT AACAACTCAATAATTGGCTTTCTTTTCTGAAGAATTCAGTCAGAATTTAA TTGTCATAATAGATTAATTAATTATTATTATATTAACTTTATTTTGCGTG AATGTAATTTCAAAGACTGTATGAGATTTTTGATTCAAAAATCTCAAGTT TTTCATTTTCAAATATATAAATTTCTATTAACATAATGCAAAAAATATTC CCATTGATTAATTATGATTTTCGAGTATAAACATGCCTTTATTTAAATTG AATTTTGCTAAAAATTATCATTTATAAATTATAATTATTGATTTATTCAT TTCTTAATGTGATTCGCCTAAAACAGAAAATTTATAGTTCAATTATGGTA CGAAGTTTGTTAGAGTTATCTTTAAAGACCTTACTATTGGGTAATTTTTT ATCAGAAAACGCAAATTCCGTAAATGGGCTTCCGACAACCCTTAAAGATA GGCTGTTAAGCCTATTATCAAGTAGAAGAAACGGTTTGGCGGATTTAAAT CTCTTGACAGTGCTAACTCATTCAAAAACTACAGATCTTGATCTATCATT AGTTGATTGGATTGATGATGAAGCTTTGATATTAACATCTGGCAGTATAT TTCTCAGAAGCTTAAATTTGAGTGCAGTAAGCTGCGGTGATATCCGAATT GGCGTAACCCCTAAAGGTATGTCGATCTTACTCTTGTTTTCTTCTTTCAC TAAAATAATGTATTTCCAAATTACTCAAGGGCTCATGGAAATTCTTAGAA ATAAACGATTTCTTCATTATCTTAATCTTCGTGGAAACTCAAGAGCTCTC AATAACGAAGTATTTGAAATTATTAAAAGAGAATGCCCGTCACTAAAAAC AATAGATATGAGTCGATGCAGTCCTGGTGTGAATGACTATGGTTTGTCAG TATTGAGGGATTTGCCTCTTACATCTCTTAGTATAAGTTCAACGGAAATT ACAGATAAAGCCTTGATAGGCTTATCTCAAGGCGATTGCAGGAAATCTCT ACAGGAAATTCGAATTGACGGTTGTTTAGAAGTATCGGATTCGGGTGTAG GTGCAATTTTAGCATCATGCAATAAACTTAATGTGTTTCTTTTTGACTAT AGTCCTAAACTCACTCATGTTGCAAGAAGAACATTAGACAATTACTTTGG ATGTAGTCGAATCAAGCAAATATCCTGGACGATTCCAATTTGAATATAAA TCAATTGATTGAATTCAGTTTATCGACTTTTTTTTTTTACTAATGGAATG AATAATTA
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