EMLSAT00000010808, EMLSAT00000010808-706655 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000010808
Unique Name	EMLSAT00000010808-706655
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s716	supercontig	LSalAtl2s716:5313..12009 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000010808 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000010808	EMLSAG00000010808-693574	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000048201	EMLSAE00000048201-757129	Lepeophtheirus salmonis	exon
EMLSAE00000048202	EMLSAE00000048202-757130	Lepeophtheirus salmonis	exon
EMLSAE00000048203	EMLSAE00000048203-757131	Lepeophtheirus salmonis	exon
EMLSAE00000048204	EMLSAE00000048204-757132	Lepeophtheirus salmonis	exon
EMLSAE00000048205	EMLSAE00000048205-757133	Lepeophtheirus salmonis	exon
EMLSAE00000048206	EMLSAE00000048206-757134	Lepeophtheirus salmonis	exon
EMLSAE00000048207	EMLSAE00000048207-757135	Lepeophtheirus salmonis	exon
EMLSAE00000048208	EMLSAE00000048208-757136	Lepeophtheirus salmonis	exon
EMLSAE00000048209	EMLSAE00000048209-757137	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto768563	auto768563	Lepeophtheirus salmonis	polypeptide
EMLSAP00000010808	EMLSAP00000010808	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s716:5313..12009-

protein sequence of EMLSAP00000010808

>EMLSAP00000010808 ID=EMLSAP00000010808|Name=EMLSAP00000010808|organism=Lepeophtheirus salmonis|type=polypeptide|length=1193bp
MLSKKIALRYRSVLRLKGPDSLNLLQGLVTPNILKKTSAYGYALDVRGRI
LFDFFFHSLQGSSRGDDHRLRKKVELNVDHSLGVFVSSKPEELLIQDPRT
ENTNIHLFRGLLNHLDNDSREEDAEIYNEMRLQHGWAEGRNEIPPGMCFP
LEYNGDILPGEAISFNKGCYVGQELTARTHHTGVIRKRIMPLLFDKQCSD
GVALDSPLKNINGKSVGKLRSEISPSGRALGLVRIKDVLESPKFECNGLV
CRAEIPSCMCSNGIFVLTSPFQQILTRYKASLPELLRHSEGLLYVHLLPG
VNTWPPKRLPIQMSDYASVIRRIYSHTITVSPNLDVRVLLNGIKPNLNPI
HLKLAHPVKNVFFEKSSFGRVVHGYMNGIPENQNINRIILTKDMEETVNE
DQSSAHSDSKLKYDKLYEHVVLGGTFDRLHSGHKILLSEAILRTKKTLTI
GVTGDIMTQSKILSELIQPLHVRIKNVSDFVRDQDTFLKYDIIEINDPFG
PSITNPDFELIIASQETEKGCLKINEIRKDSKLNEMDIAIISILEDPIHE
IYEEDKVSSSSARMRLLGEEIKPTSXGISEPYIIGLTGGSASGKTSIANF
LKEEYSDMVGVVDCDKLGHLAYLKGTKCYHEVIDAFGEDVVNKETREIDR
QILGSKVFKDPSNKEKLERIVWPYILEQTAENIKKFKEQGKKVVILDAAV
LISANWHHICSQIWVSMVPRSEAVKRIVQRDGKTEEEAGRRIDSQLTNKK
LVSHAHVKLTHVNETKFANTNTSNAQNVDDADEEMRYKILDASLNHVPKL
GWSYESVHAGIQELGYPSTMSGIIQNPGIELIHHHVEQSNNKIEKVMRLN
VKNNIRTDTQSFLKRSIETRLRMNIPYATRWSEALAIMTVESPCKSFHYS
LDLMDIFCNVMGDKSVDFNWYSKRLSLGLLYKSTEMAMINDTSPDYFDTW
MFLERRIQDIEKVESVTSGICIPTSHKIYGEPRTINCANYAMFIALERVI
ELNHPLASKIFSEQLIELHRGQGMEIYWRDSYQCPTEEEYRKMSIRKTGG
LFALGVRLMQLFSESKSNYLELVDLLGLYFQVRDDYAGLVMSEYHFSKGF
AEDLTEGKFSFLLVHAIKTNEEDNQIVNILRKRTTEDSIKKHCIHLLKQC
GSFEYTKNVLKDLDSKARTEVHRLGGNPLLDALLDELMNWDNK

mRNA from alignment at LSalAtl2s716:5313..12009-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000010808-706655 ID=EMLSAT00000010808-706655|Name=EMLSAT00000010808|organism=Lepeophtheirus salmonis|type=mRNA|length=6697bp|location=Sequence derived from alignment at LSalAtl2s716:5313..12009- (Lepeophtheirus salmonis)
ATGTTGTCGAAGAAAATAGCCTTGAGGTATCGCAGCGTTTTACGACTCAA
GGGCCCAGATAGTCTAAATCTTTTGCAAGGGCTTGTCACTCCCAATATTT
TAAAGAAGACTTCAGCCTACGGCTATGCGTTGGATGTGAGAGGCCGAATC
TTGTTTGATTTTTTCTTTCATTCTCTTCAAGGATCTTCCCGAGGCGACGA
CGTAAGATGGGATTTTTAATTTCTAAACTTGATTCACAAAGAGTAAAAAC
TCCCTCCTATTCTTTCCATGTGTTTTTAATTATAATTAAACCAACTTTGA
TGTAATATATTCTATGAACCAATAGCCCGTCAACATAAAACCAAACTAAA
AGGATATTTCTCAAAATTGAGTGTGAATTACATTTGTATTCTTCAACGAC
GAATTACCCTCAATTTCTATTACAAATTGATTGATCTTATTGTTGAAAAG
GGCCACATCGGGCACAATATAAGTTTCTTAAGTCAAATATAGGTTCACAA
CTATTGCTAAAATTCTTGTGTATCTTAACCCCTCCCAGAAATTTGAATAC
AAAGCCTATAATTGACTTAAACATGCCCTGGAAATATTGAGTTGTATGTA
CATATTTATGAAGAAAAAAAACTGAGATTTTCTCTTTTAAATGAATTCTT
GAACGAATTATCGTCAGTTTCCATCATCAAATTAGTTTTATTCGCCCTTG
GTTTGACCCGCAAACTACACTTAAAGTAGGCTAAATTCTTCATGACAATG
AAAAAATGAGAAATTGATATATTTTATGGTTGAAAAGGGAGATATCAGGG
CCAATATAAGTCAAATCAATTAAAGATTATAAACTATTGCTAAAATTCTT
GGATATCTTACTTCATCTCATAAATTGGAATACAAAGCCTATAATTGACT
CAAATATATATATGAAATATTTGGCTGTATGTAGTGGTAACTTGGGTAAT
ATGAGACGCTTTTACAAAGCTCCTATATTTTTTAATCTATTATAGTCATG
TAGCTAGAACCTTCAGAGTAGATGCACCTTCATGTCGTGGATTAAAAATT
ACTCTACTTATCTCCAACACACAACAATAAAATTAGAACCCTTTTTGGAA
AACCAGTAATAGGCCCATTTTACAGAAAGCTCATGGTAATACAGATCACC
AGAGTTGTCCCAGGACTGGATGACCTTATGACAATATCAGAAACATCCAC
AAAGTCATGGACCATATTACCCCAATTAGTGTGTTCCATACACACTACTC
CACAGAGGAATTTCATATATATTATTATGTTGCTAAAAATTTATAATCTT
AGAAATTCATGCTTAGTAACACATCAGCTTCCACATTGTATTCTATATTT
ACTATTTTATCCTTGTGTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNTA
TATTCTAGTTATTTTCAGAAGATGATTANAAAATTGTTTAATAATAAATA
CTTACATTCTCACATGGGGGGGGGGGGGGCGGAGGATTACCTTGCATGCA
ATATGGCTTAAAGATGCCATTTAATGTCACATATCAAACGAAAGTAACTC
TAGAATAAATAGTAAAGTGTATATTAGAGTGTATTATACTACCTAGGAGC
CCATATTACTCCAGTTGCCCCATATTTAAAGTAGAAAAATAAATTGGGAT
TTTCTTTGTTTTGTTCAAGATTATTTTTATGTTGACACACTACATATATT
GTCTGAAATGAGGGATTTTCATTTTTTAAGGATAATTCGAATTCTTATGC
ATTGGATCTGGACTCTGACTCCACAACTGAGCTCGCACTAAAACACTTTA
AACAGCATCGCCTCCGTAAAAAAGTAGAACTTAATGTGGATCATTCACTA
GGCGTTTTTGTTAGTTCAAAACCAGAGGAGTTACTTATCCAAGATCCTAG
AACAGAAAATACAAATATACATTTATTTAGAGGACTTTTAAACCACCTTG
ACAACGATTCACGTGAAGAAGATGCCGAAATATACAATGAGATGCGCTTA
CAGCATGGTTGGGCCGAAGGAAGGAATGAAATACCTCCTGGAATGTGTTT
TCCGCTGGAATATAATGGTGATATACTTCCAGGAGAGGCAATATCCTTCA
ATAAAGGCTGCTATGTTGGACAAGAGCTAACGGCAAGAACACATCATACT
GGTGTAATTAGAAAAAGGATTATGCCTTTATTGTTTGATAAGCAATGCTC
TGATGGTGTTGCATTGGATTCGCCTCTAAAGAACATAAATGGAAAAAGTG
TTGGAAAATTGCGCTCAGAAATATCTCCGTCTGGAAGAGCATTAGGGCTT
GTACGAATCAAAGATGTGTTGGAATCTCCCAAATTTGAATGTAATGGGCT
TGTTTGTAGAGCCGAAATCCCATCTTGGTGGCCAGAATTATATTAAGAAC
TTTTATTATCAATCTTAGTATGGAATTTATGTTTGTTATCCTAGTAATGG
ATCTAATGATTTGAATGTAATTTGAAAAGAGTTTGGTGTGACGGTATGAT
CTTTCATCGCGTTGTATTTTCAATTATTAATTTGAATTACATAATGGCTA
AGTGTAAATTTATAAATTTACATATAAATATTTCGAGGAAGTGATTTACT
TATTTAGAAAATATAATTTAATTTGTAATTGTAAATAAAGTATTGTGTAG
CTATATTATTAGTTAATAACTTGCCTAAATTCATTTTTCAGCATGTGCTC
TAATGGTATTTTCGTTTTAACGAGTCCATTTCAACAAATATTGACACGTT
ATAAAGCCTCACTTCCAGAGTTGTTGAGGCATTCTGAGGGCCTTCTTTAC
GTTCATCTTCTTCCAGGAGTCAACACGTGGCCCCCAAAACGATTGCCTAT
TCAAATGTCGGATTATGCCAGTGTTATACGCCGAATATATTCACATACAA
TAACTGTTTCTCCAAACTTGGACGTCCGTGTTCTTCTAAATGGAATAAAG
CCTAACCTTAATCCCATACACTTAAAGTTAGCTCATCCTGTCAAAAATGT
GTTTTTTGAAAAATCATCTTTTGGTAGAGTTGTTCATGGCTATATGAATG
GAATTCCTGAAAATCAAAATATTAATAGAATTATCTTAACTAAGGATATG
GAAGAGACTGTGAATGAGGATCAGAGCAGTGCTCATTCTGGTTTACAAGG
GAATGCATTAACTTTTTTACTGACTTTTTCATTTCAAAAATTAAAGTTAT
CATTTTTATTTAACTATAAGTACTTAAGGAACAATCTTTTACCTAAATTA
TTATGATTTTTTTTTAGAAAAAAGTACATACTTGTAGAAAAGTTAATGTA
TTTCCAAATTTAATATAGATAGTAAATTGAAATACGATAAATTGTACGAA
CATGTCGTATTAGGGGGCACGTTTGATCGTCTACATTCTGGTCATAAAAT
TTTACTGTCTGAAGCAATTTTGAGAACAAAGAAAACTCTTACTATTGGCG
TTACCGGCGATATAATGACTCAATCAAAAATTTTAAGCGAACTTATYCAG
CCTCTCCATGTCAGGATAAAAAATGTTTCTGACTTTGTGAGAGATCAAGA
CACTTTTTTAAAATATGACATAATTGAGATCAACGATCCATTTGGACCGT
CTATAACGAATCCAGATTTTGAGCTAATCATTGCTAGTCAAGAAACTGAG
AAGGGCTGCCTCAAAATAAATGAAATAAGAAAGGATTCAAAGTTGAACGA
AATGGATATTGCTATCATTTCGATTTTAGAGGATCCTATACATGAAATAT
ACGAGGAAGATAAGGTATCCTCCTCTTCTGCGAGAATGAGATTGTTAGGA
GAAGAAATTAAGCCAACATCTCSTGGTATAAGCGAGCCATATATAATTGG
CTTAACTGGAGGAAGTGCCTCTGGGAAGACAAGTATTGCAAATTTTTTGA
AGGAAGAATATAGTGATATGGTTGGTGTTGTGGATTGCGACAAGCTTGGC
CATTTGGCCTATTTGAAGGGAACTAAGTGCTACCACGAAGTTATAGATGC
ATTTGGAGAAGATGTTGTGAATAAGGAAACTCGGGAAATTGATCGACAGA
TTTTGGGTTCTAAAGTATTCAAAGATCCTTCTAATAAAGAAAAGCTTGAG
AGGATCGTTTGGCCATACATTCTTGAACAAACAGCCGAAAATATCAAAAA
ATTTAAGGAGCAAGGGAAAAAGGTAATTAATTAGCTCTCTTAATGATATA
TTTTAATAATATTTGGTCTATTGAATCATTTATCTTTCATATTTTATTTT
TTTCAAGGTCGTGATATTAGATGCTGCAGTTTTGATATCTGCTAATTGGC
ATCATATTTGCTCTCAAATATGGGTTTCTATGGTACCCAGAAGTGAAGCA
GTAAAGCGTATTGTACAAAGAGATGGGAAAACGGAAGAAGAAGCGGGTCG
TCGTATTGATTCGCAATTGACAAATAAAAAGCTGGTGTCTCATGCTCATG
TCGTATTTTGTTCACTATGGGACGTCTCTTTCACTCGAAAACAAGTTTCA
AAAGCCATAGACAGACTTTTAAATAAATTTGAACTTACTTAAAAGTATAA
TGAATATACATAAAAAATGTCTTACTTCAGTCACCTCCAGACCATTACTT
ATTTTACCTATTTAACATTTAAATTATGTTATTTTTTACAGAAACTGACT
CGTAATGATTCGTAATCCTCGTTTTTTTCGCTCTTTAATTGGACCTTCTT
CCAGATTTCGATTTTGTCATAAAGATGTTAATGAAACCAAATTTGCCAAT
ACAAATACTAGTAATGCTCAAAATGTTGACGATGCAGATGAAGAAATGAG
ATATAAAATACTTGATGCGAGTCTAAATCATGTTCCTAAACTAGGTTGGA
GCTATGAATCCGTACATGCCGGTATTCAAGAACTAGGATATCCTTCTACT
ATGTCTGGAATTATTCAAAATCCCGGAATTGAACTTATTCACCATCACGT
TGAGCAATCAAACAACAAAATCGAAAAAGTTATGAGATTAAATGTCAAAA
ATAATATAAGAACAGATACTCAGTCCTTTTTAAAAAGAAGTATCGAGACT
CGTCTTCGAATGAATATCCCTTATGCAACCAGGTGGTCTGAAGCTCTTGC
TATAATGACTGTGGAGTCGCCATGTAAATCTTTTCATTATAGTCTTGATC
TTATGGATATTTTCTGTAACGTTATGGGGGATAAATCAGTGGACTTTAAC
TGGTATTCTAAAAGGTTATCTCTTGGTTTATTATATAAGTCAACAGAAAT
GGCCATGATAAATGATACATCACCTGATTATTTCGATACATGGATGTTTT
TAGAAAGGCGTATACAAGACATTGAAAAAGTAGAAAGTGTTACTTCTGGG
ATTTGTAATATTCCAGATGCCGTTTTTGGAGTAGCTTCTACTGTTAGAAA
TATGATTGGACTCAGAAAATAAAGCAAAATGATGGTTATTATAATTCAAA
CTTATTATCTTCACTGACTCTCGTTGAATTTAATACTTTAGTAATTAACT
TAAATATTATCTTCAAAAGATACAAAATATCTATTCATTTATATGGTTTA
AATATTATTACTTGTATGATTTGTGAAAATTACACTTGAATATGATCTGA
ATTACAGTCTGTTGTGAAAATAAGACAAAAATTTAATTTGTTTGATTTAT
ATTTTAGATGAACCTCCAACACTCTAACATTCCATTTAGCAAAGACTGTG
ATGAAAAGGAAGATAAACTCTTGTTAGAGNCCTTATACATATTTACTCCA
AGCAAAGGGTAAGAATATAAGGAAAAAAATGCTTACGGCATTCAACAAAT
GGCTGAATATTCCCACCGACAAACTAAATAAAATTATCGAGATTATTCAA
ATCCTTCATAACGCGAGTCTTCTTCTAGATGATATTGAAGATAATGGAAT
TCTTCGAAGAGGTTGTAATTGGCTGKGTTCATACTTTTATTTGAGTTCAT
ATTTTTATTCTGCTTAAGGTATCCCGACATCTCATAAAATATATGGTGAA
CCTCGTACTATAAATTGTGCAAATTATGCAATGTTTATTGCATTGGAAAG
AGTTATCGAGCTTAATCATCCTTTAGCTTCTAAGATATTCTCTGAACAGC
TTATAGAACTTCATCGTGGGCAAGGCATGGAAATTTATTGGAGGGATAGC
TATCAGTGTCCTACAGAGGAAGAGTATCGTAAAATGAGTATCCGGAAAAC
TGGAGGCTTATTTGCACTTGGAGTTAGACTCATGCAACTTTTTTCAGAAA
GTAAAAGCAATTATCTGGAACTAGTCGATCTACTTGGTCTTTATTTTCAA
GTACGTGATGATTATGCTGGTTTGGTGATGAGCGAGTATCATTTCTCCAA
GGGCTTCGCTGAGGATTTGACTGAAGGAAAATTCAGTTTCCTTTTAGTGC
ATGCCATAAAGTATTAAAAATTAGTATAATTTTTAAAAATCCAAATCCTC
GCCTTTTTTTTTTTCCAGGACCAATGAAGAGGATAATCAAATAGTAAATA
TTCTTCGTAAGCGCACCACAGAAGATTCTATCAAAAAACACTGTATTCAC
TTATTAAAACAATGTGGGTCCTTTGAGTACACGAAGAATGTTTTAAAAGA
TCTTGATAGTAAAGCTCGAACTGAAGTTCATCGTCTGGGTGGAAATCCTC
TCCTGGATGCTCTATTAGATGAGCTCATGAATTGGGATAACAAATGA

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