EMLSAT00000010966, EMLSAT00000010966-706813 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000010966
Unique NameEMLSAT00000010966-706813
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s735supercontigLSalAtl2s735:70316..72904 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000010966 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000010966EMLSAG00000010966-693732Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049026EMLSAE00000049026-757954Lepeophtheirus salmonisexon
EMLSAE00000049027EMLSAE00000049027-757955Lepeophtheirus salmonisexon
EMLSAE00000049028EMLSAE00000049028-757956Lepeophtheirus salmonisexon
EMLSAE00000049029EMLSAE00000049029-757957Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto771342auto771342Lepeophtheirus salmonispolypeptide
EMLSAP00000010966EMLSAP00000010966Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000010966

>EMLSAP00000010966 ID=EMLSAP00000010966|Name=EMLSAP00000010966|organism=Lepeophtheirus salmonis|type=polypeptide|length=448bp
NFQGRENDIIILSLVRSEKETIGFLSISHRVTVALTRARRGLFLIGNINH
LGEKSSIWNEVKSYSIQENIISNKFNLHCPNHKNETSFKISSSIDFKSAS
CSMICGFKYKNCGHTCKRSCELSHLWHEDDGLCTDPCSIKCKFGHVCSGG
KCHGSFIPCPLCQKIVKELLLECGHILKVFCYRQEDEFFLNRCTSIVEES
LPRCGHVIRRPCWNKNNFICEETCGKVLSCGHECELKCHLNSNHNICEKS
CTKIYLDCNHTCNMKCYVNCPIICPKLVSKRLNCGHVIENVECGKKVFCT
ERCNRELICGHGNCKRFCYECQDSVLCDQSQCNEKIRVNLECGHTQTIKC
SSAIKKCDSKCTRKLLCGHPCTGICSDPCDNTKCDALIETNTLSCGHVGL
KKCKDQNKNIPCSELCQGINKICGHPCKNRTCSDCLSGEIHFHLSRTM
back to top

mRNA from alignment at LSalAtl2s735:70316..72904+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000010966-706813 ID=EMLSAT00000010966-706813|Name=EMLSAT00000010966|organism=Lepeophtheirus salmonis|type=mRNA|length=2589bp|location=Sequence derived from alignment at LSalAtl2s735:70316..72904+ (Lepeophtheirus salmonis)
AACTTTCAAGGAAGAGAAAACGATATTATAATCCTGTCCTTAGTAAGATC TGAAAAAGAAACCATAGGTTTTCTTTCTATAAGTCATCGCGTCACCGTTG CATTAACCAGGGCTAGAAGAGGCCTTTTTCTTATTGGAAATATTAACCAT CTTGGTGAAAAGTCCAGTATTTGGAATGAAGTGAAATCTTATTCAATACA AGAAAATATTATTTCCAATAAATTCAATTTACATTGTCCTAATCATAAAA ATGAAACTTCTTTTAAAATTTCCTCGTCCATCGATTTCAAATCAGCTTCA TGTTCTATGATCTGTGGTTTCAAATATAAAAACTGTGGCCATACATGCAA GAGATCTTGTGAATTATCCCATTTATGGCATGAAGATGATGGGTTATGTA CCGACCCATGTTCGATTAAATGCAAATTTGGTCACGTTTGTAGTGGAGGA AAATGTCATGGATCTTTTATTCCTTGCCCATTATGCCAGAAGATAGTGAA AGAATTATTGCTTGAATGCGGCCATATTTTAAAAGTTTTTTGTTATAGAC AAGAGGACGAATTTTTTTTAAATCGATGTACATCAATCGTAGAAGAATCC CTTCCCAGGTGTGGACATGTGATACGTAGGCCTTGTTGGAATAAAAACAA TTTCATTTGTGAAGAAACCTGTGGGAAGGTACTCTCGTGTGGACATGAGT GTGAGCTCAAGTGTCATCTTAATTCTAACCACAACATTTGTGAAAAGTCG TGTACAAAGATATATTTGGATTGTAATCATACTTGTAATATGAAATGCTA CGTTAATTGTCCTATAATATGTCCCAAATTAGTTTCTAAAAGACTAAATT GTGGTCATGTGATAGAAAATGTTGAATGTGGTAAAAAAGTTTTTTGTACT GAAAGGTGTAATAGGGAACTGATATGTGGACATGGTAACTGTAAACGATT TTGTTATGAATGCCAGGATTCTGTACTTTGTGATCAAAGTCAATGCAATG AAAAAATTCGTGTCAATCTTGAATGTGGTCATACACAGACAATAAAGTGT TCATCTGCAATTAAAAAGTGTGACTCGAAATGTACACGCAAACTTTTATG TGGTCATCCCTGTACTGGAATCTGCTCAGATCCTTGTGACAACACAAAAT GTGACGCTTTGATTGAAACAAATACCTTGAGCTGTGGTCATGTAGGATTA AAGAAATGTAAAGATCAGAATAAAAATATTCCGTGCAGTGAGCTTTGTCA GGGAATAAACAAGATCTGCGGTCATCCTTGTAAAAATAGAACTTGCTCTG ATTGCTTAAGTGGTGAAATTCATTTTCACTTGTCAAGAACCATGTGAAAG AACTCTACTTTGTGGGCATAAATGCCCAGAAATTTGTGGAGCACCTTGTC CGCCCTGTGATTCGAAATGCTTAATTACTTGTTCGCATTTACAAAAGTGT AGATCAAAATGTGATGAACCATGCCAGCCTGATTGCAAGGTACATACAAA TAGTATTTAAGTTTTTATTATTCAATTTCTTTTATCCAGAGCAAATGTGG ATTGTCTTGTTCTCACGGAAAATGTGGATTCAAATGCATAGGAAAAAAAT GCAGAAAGTGTGATAATTTGATTTCTATTAATCAAAATGGTCTGAAGTTT ACAGGTCGATGTACTGGGATTAAAACCGATGATATCAAGTTTTCCCCCAA ATGTACTGATCCTAATAACAAAAATATGTATGTTTTGTTTTTAATCAATA TTGAATACTTAATTAGAAATTTAAATTTTATTTAAAGCTACCTCATGATG CCCGATTGTGGACATTGGATTCGTGANNNGGATATTTTCAAAGGTTTATT AAATAGTAACATTGTTGGAATGTTGAAATGCCCAGAATGTCAGTTGTCTA TTATTTCCTGGATACATGGTTACAAGAAAGAAATGAAATTGAAGAACAAA GATGAAATTATTGGAGTTCAAGATATATTTTTCAGTCTTAAGACAAATCT TATCAAAAGAAAGACGTCGTTACTTATATCATTAAAAGGTTATTAGAAGC AATTTAAACATCCTAATTACTTACTTTACATTTATTTTCAGAGTCTTCGT TCAATGAAGAGACAAAAGAGAGACTGTGCCATCGACTGAGTAACATGAGT CTTTCCCGCACAATAGCTACAGAAATTATACTGAACCTACTTCAATTCTT AGACATCCATGTCAAAGAAAATAATTCTGAATTATATACTCTTCTAATTC ACCAATTACAGAATTTAAAAGAAATGCCAATCGGAAAGGATTATATAGTT CAATTTAGTCATTTCTTATCTTGTAAAGGATTCCCGAAACTCGAGATAAA CAATTTTTTTTCTTTTGACATGAATAATTGGACAGTGTCTGGAAATAAAC TTGAAAATATAGTTTTGTGATGTTTAACCTAAACATATGACCAAGGTTTC TGTTTTTGAAGAATTTTGGATATAATATTGAATTAGATGCTTCTATTTGT TTTTTTAGAGTTATTGCTTTTCTTGAATAGTGATCCACATTAATTAAGAA ATGTTTTTTTTATAAGTTTTTGTCATAAAAAGGTATTTT
back to top
Add to Basket