EMLSAT00000011049, EMLSAT00000011049-706896 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011049
Unique NameEMLSAT00000011049-706896
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s744supercontigLSalAtl2s744:105861..106334 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011049 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011049EMLSAG00000011049-693815Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049385EMLSAE00000049385-758313Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772291auto772291Lepeophtheirus salmonispolypeptide
EMLSAP00000011049EMLSAP00000011049Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011049

>EMLSAP00000011049 ID=EMLSAP00000011049|Name=EMLSAP00000011049|organism=Lepeophtheirus salmonis|type=polypeptide|length=157bp
MAXEFDFAEGDAGASETFPIQCSALRKNGYVMIKGRPCKIVEMSTSKTGK
HGHAKVHMVALDIFTQKKYEDICPSTHNMDVPNVKRKDYQLLDIDDGFLS
LMDDAGNTRDDLRVPEGEIGDEIKAAIAESRDILCNVLSAXGEEAVXATK
VXSAVDK
back to top

mRNA from alignment at LSalAtl2s744:105861..106334-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011049-706896 ID=EMLSAT00000011049-706896|Name=EMLSAT00000011049|organism=Lepeophtheirus salmonis|type=mRNA|length=474bp|location=Sequence derived from alignment at LSalAtl2s744:105861..106334- (Lepeophtheirus salmonis)
ATGGCAGRCGAATTCGATTTTGCTGAAGGAGATGCAGGAGCTTCCGAGAC
GTTCCCCATCCAGTGCTCCGCACTTCGTAAAAATGGTTACGTGATGATAA
AGGGACGTCCCTGCAAGATAGTGGAGATGTCCACTTCGAAGACGGGAAAG
CACGGACATGCGAAGGTGCACATGGTGGCCCTGGACATATTTACGCAAAA
GAAATACGAGGACATTTGTCCCTCCACCCACAACATGGATGTTCCCAATG
TGAAGCGCAAGGATTACCAACTCCTGGATATCGATGATGGCTTCCTCTCC
CTCATGGATGATGCTGGTAACACGCGGGATGACCTACGTGTTCCTGAAGG
AGAGATCGGGGATGAGATCAAAGCCGCTATTGCGGAGTCTAGGGATATTC
TCTGCAACGTTCTCTCGGCTTKTGGRGAGGAGGCTGTGRTTGCTACGAAA
GTAAMCTCCGCCGTTGATAAGTAA
back to top
Add to Basket