EMLSAT00000011054, EMLSAT00000011054-706901 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011054
Unique NameEMLSAT00000011054-706901
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s745supercontigLSalAtl2s745:30971..32113 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011054 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011054EMLSAG00000011054-693820Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049400EMLSAE00000049400-758328Lepeophtheirus salmonisexon
EMLSAE00000049401EMLSAE00000049401-758329Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769910auto769910Lepeophtheirus salmonispolypeptide
EMLSAP00000011054EMLSAP00000011054Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011054

>EMLSAP00000011054 ID=EMLSAP00000011054|Name=EMLSAP00000011054|organism=Lepeophtheirus salmonis|type=polypeptide|length=209bp
MNALILAIVCISMMKISCNILYRCPLQDERDAYFLPDPLQCDKYHLCISG
FINKTFLCSDGLVFNGNVCTLPFGFKCGVRKLLQPPSALGYCKRKNGKFP
IGSTCKEFVICNEGKAKVVMCPNDLVFDTELGECNWPSASTPCKIRSIFQ
CPEHLKYGAHFILLATQKCSRFFFICGLPGNYPLLRGCPPGLVFDEEAQR
CHKNVPECL
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mRNA from alignment at LSalAtl2s745:30971..32113+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011054-706901 ID=EMLSAT00000011054-706901|Name=EMLSAT00000011054|organism=Lepeophtheirus salmonis|type=mRNA|length=1143bp|location=Sequence derived from alignment at LSalAtl2s745:30971..32113+ (Lepeophtheirus salmonis)
AAGGGATTAAAAAAAAAAAAAGATCACTAACAAGAAATATTTCAAAAATA
ATAGTTATTAATTAGCATCTTTTTTTAATTGGATGAAAGAAATAGTATTT
AAACTGAAATATTATTAAAATCAGGACCATTCGACATTCTACGCCAACCA
TGAACGCTCTTATATTAGCAATTGTATGTATTTCCATGATGAAGATTTCA
TGTAATATTCTTTATCGCTGTCCTCTTCAGGATGAGAGGGATGCCTATTT
TCTACCTGACCCTCTTCAATGTGATAAGTATCATCTCTGTATAAGGTATT
ATAATATCTCCATTCTTGAGTATCTCTTGTGTCCTTACTTAACGAAATAA
ATTGTATATTTAGTGGATTTATCAACAAAACATTCCTTTGCTCAGATGGT
TTAGTGTTTAATGGTAACGTATGTACTTTGCCATTTGGATTTAAATGCGG
CGTTCGCAAATTACTACAGCCTCCCTCAGCATTAGGCTATTGTAAAAGAA
AAAATGGAAAATTTCCAATAGGCTCCACTTGCAAAGAGTTCGTTATATGC
AACGAAGGAAAGGCAAAGGTTGTTATGTGCCCTAATGATTTAGTTTTTGA
TACTGAATTGGGTGAGTGTAATTGGCCTTCTGCCTCTACACCTTGCAAAA
TTCGATCAATTTTCCAATGCCCAGAACATTTAAAATATGGAGCTCATTTC
ATATTATTAGCTACTCAAAAGTGTTCTAGATTTTTCTTTATTTGTGGATT
ACCAGGGAATTACCCTCTTCTCAGGGGGTGTCCGCCAGGTCTTGTATTTG
ATGAAGAAGCTCAAAGATGTCATAAAAACGTACCTGAATGTCTTTAATAT
TAAAAATACATTATGTAATTCCCTATATGTACCTTCATCTATCAGAAAAT
ACAAAACGAATCATTAATTTTAATCCCTATTTTTTATATTTCTATCCGGG
ACAACACCAATCGAGATTTAAATATTCCTAAATTAAGTATATGATATATT
ATATTAATTCAGTTTAGAGAAACATCACTAAGTTTAATGTATGGAAACAG
AAATAAATTGTCTAATGTAATGTCTTGCTTCATAAGCAATTTCGCATATG
GAGCTACGCACAGCTAGACTGAGCTATTCAAAAATGATCCCGG
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