EMLSAT00000011123, EMLSAT00000011123-706970 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011123
Unique NameEMLSAT00000011123-706970
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s755supercontigLSalAtl2s755:118813..120081 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011123 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011123EMLSAG00000011123-693889Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049759EMLSAE00000049759-758687Lepeophtheirus salmonisexon
EMLSAE00000049760EMLSAE00000049760-758688Lepeophtheirus salmonisexon
EMLSAE00000049761EMLSAE00000049761-758689Lepeophtheirus salmonisexon
EMLSAE00000049762EMLSAE00000049762-758690Lepeophtheirus salmonisexon
EMLSAE00000049763EMLSAE00000049763-758691Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772595auto772595Lepeophtheirus salmonispolypeptide
EMLSAP00000011123EMLSAP00000011123Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011123

>EMLSAP00000011123 ID=EMLSAP00000011123|Name=EMLSAP00000011123|organism=Lepeophtheirus salmonis|type=polypeptide|length=306bp
MAYTVRKLFSRTGTLIENVSVIGKRLLSNETIQGFQTLKISELEPYVYGV
ALNRPDKLNALNDRMWREIRSVFDELGKDPKCRSIVLSGNGRIFTAGIDI
MGFSKLLPELTAEKDISVKAKFLYEFIVVYQQCISAVEKCPKPVIAAVHN
GCIGAGVDLISTADIRYCTEDAYFQIKEVDLGLAADVGTLQRFPKVVGNE
SLARELCYTARKMNSSEASSLGFVNNVAPDVSSMMEKATSTASKIAEKSP
VAVQGTKINILHARDHTVDESLEYQARWNSLMLQSEDTLTAXMGMMSKTN
PEFNDL
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mRNA from alignment at LSalAtl2s755:118813..120081-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011123-706970 ID=EMLSAT00000011123-706970|Name=EMLSAT00000011123|organism=Lepeophtheirus salmonis|type=mRNA|length=1269bp|location=Sequence derived from alignment at LSalAtl2s755:118813..120081- (Lepeophtheirus salmonis)
ATGGCATATACTGTGAGGAAACTTTTTTCACGAACTGGTAAGTTAAAAAT
CTGAATGAATGAAAAACAGTTTTTAGTTTCAACTTTTAAATAAAATATTT
AATATTTGTATCTTAGGAACTCTGATTGAGAATGTCTCAGTTATTGGCAA
GAGGCTTCTGTCAAATGAAACGATTCAAGGGTTTCAAACTCTTAAAATAT
CCGAGCTTGAGCCATACGTGTACGGTGTGGCTTTGAACCGCCCTGACAAA
CTTAACGCACTCAATGACCGAATGTGGAGAGAAATTAGATCTGTTTTCGA
TGAGCTGGGAAAGGATCCCAAGTGCAGGAGTATCGTTTTGTCAGGCAATG
GTAGAATATTCACTGCAGGAATTGATATCATGGGATTTTCAAAACTCCTC
CCAGAGCTGACTGCTGAAAAAGACATTTCCGTAAAAGCTAAATTTCTATA
CGAGTTCATTGTTGTATATCAGCAATGCATTTCTGCAGTTGAAAAGGTGA
GTTGCATCCCTTGGTATAAGAAACAGGAGTGTACTGGAGCTGGAATATTG
AGGAATAAACCCACCACACGGCAAAGTGTTTTCATATTTTAATTAGTTCA
AACTCTAATTATTTACAGTGTCCGAAACCAGTCATAGCTGCAGTACATAA
CGGTTGTATTGGAGCTGGTGTTGATCTTATTAGTACTGCTGACATTCGTT
ATTGTACCGAAGATGCATATTTTCAAATTAAGGAAGTCGATTTGGGCCTA
GCTGCTGATGTTGGAACTCTGCAGAGATTTCCCAAAGTTGTAGGTAACGA
AAGTTTGGCAAGAGAGCTCTGTTATACAGCAAGGAAAATGAACAGCTCCG
AAGCATCTTCTCTGGGTTTCGTGAACAACGTCGCACCTGATGTCTCGAGG
TAATAATATTAGCATGTGAACTTAAATGAGTCAAGTCAGGTATTCTTATA
ACACGATGTATTTTATTTCGTGATATTACATTATAGTATGATGGAGAAAG
CTACTAGCACTGCTTCCAAAATTGCAGAGAAAAGTCCCGTAGCTGTACAA
GGAACTAAAATAAATATTTTACACGCGAGAGATCATACAGTCGACGAGAG
TTTGGAATATCAAGTGAATAGTGATAACTTATTAATAAAATTTCATATTT
AGATGTTTTTTGTATTATCTTAGGCTCGATGGAATAGCCTCATGTTACAA
AGTGAAGACACCCTTACGGCAGKTATGGGRATGATGTCAAAGACCAATCC
GGAGTTCAACGATCTATGA
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