EMLSAT00000011145, EMLSAT00000011145-706992 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011145
Unique NameEMLSAT00000011145-706992
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments
Table of all RNA interference experiments conducted using this feature, grouped by Phenotype CV: -Missing-
Gallery Image Title Gene or target symbol Sex/Stage Phenotype Datesort descending
AX F260 T16_11145 female
  1. PreAdult2
 normal
-Missing- 		07.05.2019 - 09:00
13.06.2019 - 09:00
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s757supercontigLSalAtl2s757:8260..10465 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011145 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011145EMLSAG00000011145-693911Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000049839EMLSAE00000049839-758767Lepeophtheirus salmonisexon
EMLSAE00000049840EMLSAE00000049840-758768Lepeophtheirus salmonisexon
EMLSAE00000049841EMLSAE00000049841-758769Lepeophtheirus salmonisexon
EMLSAE00000049842EMLSAE00000049842-758770Lepeophtheirus salmonisexon
EMLSAE00000049843EMLSAE00000049843-758771Lepeophtheirus salmonisexon
EMLSAE00000049844EMLSAE00000049844-758772Lepeophtheirus salmonisexon
EMLSAE00000049845EMLSAE00000049845-758773Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768791auto768791Lepeophtheirus salmonispolypeptide
EMLSAP00000011145EMLSAP00000011145Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011145

>EMLSAP00000011145 ID=EMLSAP00000011145|Name=EMLSAP00000011145|organism=Lepeophtheirus salmonis|type=polypeptide|length=259bp
MKIVLFTFASILLVHCFSLSSALLSCYKCEKDGKCEDQGTKEECNKDGTN
CYYTMTGDSNKIKGCKAEKKETEAPQLNGLKDLNPTPTMKWDGCFDITKQ
VDNKQAYKTCFCSSENCNINDVIKPDMVISTGEKGERKCYTCGDLSSKKP
CKEEEITDKEKTLKDCETGNCFIVESKRTKSDDPVTEVYKGCMKKDSETT
YAYGSLKFDDKEKFEGHYYVCNKNKCNYDKKSWEDSSVAGLTSSFVLIFA
GLVSYLMFN
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mRNA from alignment at LSalAtl2s757:8260..10465+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011145-706992 ID=EMLSAT00000011145-706992|Name=EMLSAT00000011145|organism=Lepeophtheirus salmonis|type=mRNA|length=2206bp|location=Sequence derived from alignment at LSalAtl2s757:8260..10465+ (Lepeophtheirus salmonis)
AAAAGCAAGAAATTAAAAGACTGCCTATTTGAGGCAATCTATAAATCTCC
AGAATAATTTCATTTATTTATCTCCAYAACAACATGTGGAAAAGCACATA
GTTTCTTTATTTACTTTCCTTTATCTTTATTGTCTTCCAGGTCTACTTAG
ATAAGGAAAACTTACATCGCAAATCTCAACAGAAGAGTTGAAGTCAGCTG
TGAGCTTCTCGTGCTTTAGCATATATATCAAGGCTTGAATACTTTAAATA
ACATTATCAAACAACCTCTTCCAACGCTGTTGTCCAAAATGAAGATCGTT
TTATTTACTTTTGCTTCCATTCTTTTGGTTCATTGTAATTTTAAGAAAAG
GATTTATATAAATATTGAAATTACAATTGGTTTTTCTTTCAATTAATATA
GGTTTCAGTCTTTCTTCAGCACTACTCTCTTGCTATAAATGTGAGAAAGA
TGGCAAGTGTGAGGATCAAGGAACTAAAGAAGAATGTAATAAGGATGGAA
CTAATTGCTACTATACAATGACTGGTAAGTTTATTATATATTTCCTTCAA
GTTAAATTTCATGTTCAAATATCAATAGGTGATTCTAATAAAATTAAGGG
GTGTAAAGCCGAGAAGAAGGAAACTGAAGCCCCTCAACTGAATGGATTGA
AGGATTTAAATCCCACTCCAACTATGAAATGGGATGGTTGTTTTGATATA
ACCAAGCAGGTTGATAACAAACAGGCCGTAAGTAAAGACATCTTCCATGG
CGAAATGAATTAAGTATATAAATTCTAAACTAATATATATATTTGTGTTA
TAGTATAAAACCTGTTTCTGCTCATCCGAAAATTGCAATATAAATGATGT
TATCAAACCTGACATGGTAATTTCAACTGGAGAAAAGGGAGAGCGAAAAT
GTTATACTTGTGGAGATCTATCCTCAAAAAAGCCATGTAAGGAAGAAGAA
ATTACAGATAAGGAAAAAACTCTCAAAGATTGTGAAACCGGGAACTGCTT
CATTGTTGAGTCCAGTAAGAGCAATGCAAAAATTGAATAATCATATTATA
CTTTACATGTTTAATTATTTAGAGAGAACTAAATCCGATGATCCAGTGAC
AGAAGTTTACAAGGGTTGCATGAAAAAAGACTCTGAAACGACATATGCCT
ACGGCTCTCTGAAATTTGATGATAAAGAGAAAGTAAGAATCATTTTATTT
AAATTTGCATTAGGGCGGTTTGTTTATAATTTTTTCGATTATGGGTAGTT
CGAAAAACTTGTGGTATAGTAACATTACCCTAGAATGTCATTCTTTGGTG
GTAAAGCATCTGGTAAAAAGTTTAAAAGGAGCTTAAAGTTATTTATTTCG
TCACTAAAGATTAAATTGCAGCATTAACCATTATTTTGTAAGAATTAAGT
TACTATGGGCGTTATACTAAGCATTAAAAAAGATGTGCACTATATGTGGA
TCATCAAATTTTCATAACTATTGTCTCTTTTTTTGTTCCATGGGACAAAT
TTGAGAATAAAACTGTTTTAACATTCCTGTAGGTTAAAACAATGTCTATC
AAAATTACTTAATGCAAAATAACTAAAAATGTCTTTTTATTCTCTATTTA
CAAAATAAAAAGTTTGACAGCATGACAACTTTTCCGCACAAGCTGTAATC
CAAATTCAAAAAAAGTTATAAATCAAACTGCTCTAACTTTAATATATATT
GTATTTTCATAAACTCGTTTCTTTTTTCTCTATTTTTGCTAGTTTGAAGG
ACACTATTACGTTTGTAACAAGAATAAATGTAACTACGATAAAAAGTCCT
GGGAGGACTCTAGTGTTGCCGGACTTACGTCCTCATTTGTTCTTATTTTC
GCGGGATTAGTCTCGTATCTCATGTTTAACTAAAAAAATGGAGACTTGGG
GATTTGGTATAGAAAATAAATTCTCATCATTGTTCAAAGTTAATTTTGTT
ATGTTTCCATGTAGAAAGTTATAGCAACACAAATAAATCTTCATTGTAGC
CACTGTAAATTATACCAGCATCGAGAAAATAAATATACATATTGTATTAA
TTGAATTTGTCAGCCTACTAAAATTTGAGCTCGTGCTGTAAATATCTGAA
TACATGTAAAATATAATGCAATAGTAATTTCGTAAATGAAATGAAAGGAT
TTTAAACAGTGATATGAAATAAACCCTCTAGGTAAAATTAAAAGACTCGA
GGAAAA
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