EMLSAT00000011278, EMLSAT00000011278-707125 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011278
Unique NameEMLSAT00000011278-707125
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s772supercontigLSalAtl2s772:352003..352802 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011278 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011278EMLSAG00000011278-694044Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050369EMLSAE00000050369-759297Lepeophtheirus salmonisexon
EMLSAE00000050370EMLSAE00000050370-759298Lepeophtheirus salmonisexon
EMLSAE00000050371EMLSAE00000050371-759299Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776741auto776741Lepeophtheirus salmonispolypeptide
EMLSAP00000011278EMLSAP00000011278Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011278

>EMLSAP00000011278 ID=EMLSAP00000011278|Name=EMLSAP00000011278|organism=Lepeophtheirus salmonis|type=polypeptide|length=213bp
MSPKARDHKPNGDVQEINCKNKSPKGSTNPSNNSEAPAXLEKKXLKHPLR
DSWTLWXFKFNKSKDWSDNLVEVFTFNTIEDFWGLYTYLQPVSTLSPGID
YSLFKTGITPMWEDAENREGGRWLIKSERQHRNSALDRMWLELLLYLIGG
DERTADEVNGGYINVRQKFNKVSLWMRNREKKAIVMEAGATFKECIGDSS
NRSSSSAVYRYVV
back to top

mRNA from alignment at LSalAtl2s772:352003..352802-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011278-707125 ID=EMLSAT00000011278-707125|Name=EMLSAT00000011278|organism=Lepeophtheirus salmonis|type=mRNA|length=800bp|location=Sequence derived from alignment at LSalAtl2s772:352003..352802- (Lepeophtheirus salmonis)
ATGTCTCCTAAAGCGCGTGATCATAAACCAAATGGAGATGTTCAAGAAAT
TAATTGCAAAAATAAATCTCCCAAAGGCTCGACCAATCCGTCCAATAATT
CTGAAGCACCGGCAGKTCTTGAGAAAAAGAWTCTTAAGCATCCACTAAGG
GATTCATGGACGCTATGGTAMTTTAAGTTCAACAAATCCAAGGACTGGTC
TGATAATTTAGTTGAAGTCTTTACATTTAACACAATAGAAGACTTTTGGG
GTCTTTACACATATTTGCAACCTGTTTCAACTCTTAGTCCTGGAATTGAT
TATTCCCTTTTCAAAGTAAGTTGGATACTCGATCCCTATCACTATGGCAT
ATTTATATAACTGAATATGATGACTGAGTATTACTATTATAATTATCAAA
TTTGATTACCTCATAATATTTTTATTACTGTAGACTGGAATCACTCCAAT
GTGGGAAGATGCCGAAAATCGTGAAGGAGGTCGATGGCTTATCAAATCTG
AGCGTCAACACAGAAATTCAGCCCTAGATAGGATGTGGCTAGAACTTCTT
TTATATCTAATTGGTGGAGATGAAAGAACTGCAGATGAAGTGAATGGAGG
TTACATCAACGTTAGACAAAAATTTAATAAAGTGTCTCTTTGGATGAGGA
ATCGAGAGAAGAAGGCAATAGTGATGGAAGCTGGGGCAACTTTTAAGGAG
TGCATTGGAGTGGATCNGAAGAATTWAAGTTGAATTTGAATTCCATGAGG
ATTCTTCAAATCGCTCTAGTTCCTCTGCTGTCTATCGCTATGTCGTTTAA
back to top
Add to Basket