EMLSAT00000011332, EMLSAT00000011332-707179 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011332
Unique NameEMLSAT00000011332-707179
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s781supercontigLSalAtl2s781:196726..197685 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011332 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011332EMLSAG00000011332-694098Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050641EMLSAE00000050641-759569Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774339auto774339Lepeophtheirus salmonispolypeptide
EMLSAP00000011332EMLSAP00000011332Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011332

>EMLSAP00000011332 ID=EMLSAP00000011332|Name=EMLSAP00000011332|organism=Lepeophtheirus salmonis|type=polypeptide|length=319bp
MVMLEEWEELQNRFRKNQKTREHSAHSSKVHSVNWSCDGRKLASGSFDKT
VCLFSLSNDRLNKEHTYRGHGDSVDQLCWHPSNPDLLATASGDKSVRIWD
ARASKSISTIHTKGENINISWSADGRTIAVGNKEDLVTFIDCKTHKIKHE
EAFKFEVNEISWNHASDLFFLTNGHGCIHVLNYPEMELKYVLQAHPGNCI
CIKFDPTGKYFAVGSADALVSLWDANELACVRTFSRLDWPVRTISFSYDG
KLLASASEDLQIDVGHVESGNKVCDVSVTSPTFTIAWHPKRYLLAYACDD
KDKYDHRDAGSLKVXGISF
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mRNA from alignment at LSalAtl2s781:196726..197685-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011332-707179 ID=EMLSAT00000011332-707179|Name=EMLSAT00000011332|organism=Lepeophtheirus salmonis|type=mRNA|length=960bp|location=Sequence derived from alignment at LSalAtl2s781:196726..197685- (Lepeophtheirus salmonis)
ATGGTCATGTTGGAGGAATGGGAAGAGCTTCAGAATCGTTTTCGTAAAAA
CCAAAAAACTCGGGAGCATAGTGCTCATTCCTCAAAAGTACACTCGGTAA
ATTGGAGTTGTGATGGTAGAAAACTGGCCTCTGGATCTTTTGACAAAACT
GTTTGTCTCTTTTCTCTCTCAAATGACCGTCTCAATAAAGAGCATACCTA
TCGGGGTCATGGAGATAGTGTGGATCAGCTTTGCTGGCATCCTAGTAACC
CTGATCTACTTGCGACTGCTTCTGGTGATAAATCTGTGCGTATATGGGAT
GCCAGAGCAAGTAAAAGTATATCAACTATCCATACTAAAGGTGAAAACAT
CAATATATCCTGGTCGGCAGATGGTCGAACCATTGCTGTTGGTAACAAGG
AGGATCTTGTCACGTTTATTGATTGTAAAACACATAAAATCAAGCATGAA
GAAGCATTCAAGTTTGAAGTCAATGAAATATCCTGGAACCATGCTTCAGA
TTTATTTTTTTTAACTAATGGCCATGGATGCATTCATGTTTTGAACTATC
CAGAAATGGAATTGAAGTATGTCCTTCAAGCCCACCCAGGGAATTGCATT
TGCATCAAATTTGATCCTACAGGCAAATATTTTGCCGTAGGTAGTGCGGA
TGCCCTCGTCTCCTTATGGGATGCTAACGAACTTGCTTGTGTAAGAACTT
TTTCAAGATTGGATTGGCCTGTAAGAACCATTTCATTTAGTTATGATGGG
AAATTGTTAGCTTCTGCTTCGGAGGATCTTCAAATTGATGTTGGCCATGT
TGAGAGTGGAAATAAAGTTTGTGATGTATCTGTTACTTCTCCAACTTTTA
CTATTGCCTGGCATCCTAAACGATACTTACTGGCTTATGCTTGTGACGAT
AAAGATAAATATGATCATAGGGATGCCGGGTCCTTAAAAGTTNNGGGGAT
TTCCTTCTGA
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