EMLSAT00000011333, EMLSAT00000011333-707180 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011333
Unique NameEMLSAT00000011333-707180
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s781supercontigLSalAtl2s781:197870..198910 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011333 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011333EMLSAG00000011333-694099Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050642EMLSAE00000050642-759570Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774362auto774362Lepeophtheirus salmonispolypeptide
EMLSAP00000011333EMLSAP00000011333Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011333

>EMLSAP00000011333 ID=EMLSAP00000011333|Name=EMLSAP00000011333|organism=Lepeophtheirus salmonis|type=polypeptide|length=346bp
MASLSFTPSGSQHSIPRFEGFHEWHIEKFSTRTHAPGFYLTTLFKVPVRD
EFGRDVDTVWKITLYPNGCTPQDANYLSLFLCQESGPCHFVRFSFSINTI
RSSFKKLLPSNTRICFGLVGNERFPGRGWKRYISVPTVKNYLLQSSDLNI
VCSLQLEISTDSVPRFQPNQEIFSDKNNTFDVHSIPFTDCVLVLKNGLEY
GVHKFMLAQYSDVFKAMFSHDFAESRSNRVTILDIKSEAIEEMIRFIYSG
STRDIRVVHRALYKAADKYNIIRLKLACETSIINSLKVDNACSTLIFARD
NFTNYILNATTKFISYNLNRVKYTQGWQEVIQHADLVDQIFKGLDL
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mRNA from alignment at LSalAtl2s781:197870..198910-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011333-707180 ID=EMLSAT00000011333-707180|Name=EMLSAT00000011333|organism=Lepeophtheirus salmonis|type=mRNA|length=1041bp|location=Sequence derived from alignment at LSalAtl2s781:197870..198910- (Lepeophtheirus salmonis)
ATGGCATCATTGAGTTTCACTCCTTCTGGTTCTCAACATTCGATTCCACG
GTTTGAGGGCTTCCATGAATGGCATATTGAAAAATTTTCTACTCGAACTC
ATGCACCTGGGTTCTATTTGACAACCCTATTTAAAGTTCCTGTGCGAGAT
GAATTTGGAAGGGATGTTGATACTGTTTGGAAAATTACACTCTATCCAAA
CGGGTGCACGCCTCAGGATGCTAATTACTTGAGTCTATTTTTATGTCAAG
AGTCTGGACCGTGTCACTTTGTCCGTTTCAGTTTTTCCATTAATACAATT
AGATCCTCATTCAAAAAATTGCTTCCCTCAAACACTCGAATCTGCTTTGG
TTTGGTTGGTAATGAAAGATTTCCAGGGAGAGGATGGAAACGCTATATCT
CTGTTCCAACCGTCAAAAATTATCTTTTACAGTCCAGTGATCTCAATATT
GTTTGTAGTCTTCAATTGGAAATTTCTACTGACTCTGTTCCCCGTTTTCA
GCCTAATCAAGAGATATTTAGTGATAAAAATAATACTTTTGATGTTCATA
GTATACCCTTTACTGACTGTGTTCTTGTTCTTAAAAATGGTTTAGAATAT
GGAGTCCACAAATTCATGTTGGCCCAGTATTCAGATGTATTTAAGGCCAT
GTTTTCACATGACTTTGCTGAATCAAGATCCAATCGAGTCACGATATTGG
ATATAAAGTCTGAGGCCATTGAAGAAATGATTCGTTTCATTTATTCGGGT
TCTACGAGAGATATTCGTGTAGTTCATAGAGCCTTATACAAAGCTGCTGA
CAAGTATAATATCATACGCTTGAAATTGGCGTGTGAAACCTCAATCATCA
ATTCCCTTAAAGTTGACAATGCTTGCTCTACTCTTATTTTTGCGAGGGAC
AATTTTACTAATTATATTTTGAACGCAACTACCAAGTTTATTAGTTATAA
TTTAAATCGCGTCAAATATACTCAAGGATGGCAGGAAGTGATTCAACACG
CAGATCTAGTAGATCAAATCTTTAAAGGACTTGATCTATAG
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