EMLSAT00000011335, EMLSAT00000011335-707182 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000011335
Unique Name	EMLSAT00000011335-707182
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s781	supercontig	LSalAtl2s781:205091..212596 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000011335 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000011335	EMLSAG00000011335-694101	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000050646	EMLSAE00000050646-759574	Lepeophtheirus salmonis	exon
EMLSAE00000050647	EMLSAE00000050647-759575	Lepeophtheirus salmonis	exon
EMLSAE00000050648	EMLSAE00000050648-759576	Lepeophtheirus salmonis	exon
EMLSAE00000050649	EMLSAE00000050649-759577	Lepeophtheirus salmonis	exon
EMLSAE00000050650	EMLSAE00000050650-759578	Lepeophtheirus salmonis	exon
EMLSAE00000050651	EMLSAE00000050651-759579	Lepeophtheirus salmonis	exon
EMLSAE00000050652	EMLSAE00000050652-759580	Lepeophtheirus salmonis	exon
EMLSAE00000050653	EMLSAE00000050653-759581	Lepeophtheirus salmonis	exon
EMLSAE00000050654	EMLSAE00000050654-759582	Lepeophtheirus salmonis	exon
EMLSAE00000050655	EMLSAE00000050655-759583	Lepeophtheirus salmonis	exon
EMLSAE00000050656	EMLSAE00000050656-759584	Lepeophtheirus salmonis	exon
EMLSAE00000050657	EMLSAE00000050657-759585	Lepeophtheirus salmonis	exon
EMLSAE00000050658	EMLSAE00000050658-759586	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774481	auto774481	Lepeophtheirus salmonis	polypeptide
EMLSAP00000011335	EMLSAP00000011335	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s781:205091..212596-

protein sequence of EMLSAP00000011335

>EMLSAP00000011335 ID=EMLSAP00000011335|Name=EMLSAP00000011335|organism=Lepeophtheirus salmonis|type=polypeptide|length=1703bp
MLVGLVFINYLSFTNYYRLPYFLYLYTNSPLLYYYNTTTNNKVTTTSIFF
IKINNVGNINCLLSHQSNHRYFRLPMDILGLKPWLLRQCETIGLKAPTPV
QQATVSKILKGANGVGIAKTGSGKTAAFALPILDALSEDPYGVFALVLTP
TRELAYQIGDTFKILGKPLNVKVSIIVGGRDMVMQGSELSTSPHILIATP
GRLADHLQSITSSKLLKKIRFLVIDEADRLLEGGFDEQLSQIFTAIPSER
QTLLFTATHTEALKDLIEVNSDKQPFFYREGEDDASSLTVNTLEQYYVLT
PADFRDAYLVGXDHEMPGGVSQCILYNICFSNVSLHSMKPQRERLQSLSR
FRSHLAKILIATDVASRGLDIQQVEYVINHNIPTDAKDYVHRVGRTARAG
RXGXXISLLXPHDVLLIQSIEEMISSKLSEFKVSDKNITEIVVQVNVTRR
EXDIKLTEADFDEKRRLNKRKKLIEQGIDPDEFEREQKKRRRRMQKEEQR
ERKKKRLENSGDQKILRSCKSGITNDTQFHKTQFRVKSRRSPFDDEDVEG
LEEGPSTSRKRLALEDPKQLCFRLKEEGIQLALENKLWSAVRTWDRALDI
DSSDTELRSRIEASEEMKAQSFIQLHEWPLAIESARFSLQSGGSNYYPAW
QTLGRAHLGTGELSEALAAFSKALHLCPDDVELFSEDFLWALSLKSRHDL
HQNPKMPNKLNTHKGFYTNVLPNFTVMNVDKPPCYLRKFTPDGKRFIAFS
SCQXFLEIYCYNGPASIADLIYNTPDKKIKQVAFNRFFKLGKDKFLNFRQ
TLIQWRVKLSSNGEQLNRECSLFLDGGKFIIVGSACYLPQEHLTLRQYHK
NNESLAPNPRYPLENYTLYCVKTDSGTLIDEVSLNADKVYLSHNQGIYLY
NNLLAVLGVQHQTIHLYRMQKGCFIPIVKIGRLLEDDDEYLLSISREHSQ
KESSINALKHRILVFLYQRAMKSSLDQKHPGELRRFYQYFDQLKGLRIWK
MQLIDEDHILLKYASEEVVTHRKSESNSQLSFFVIYDRKNTRILSIYDNN
SKELVEIFEQHCDFFRNSSESRIASSPSNNVYAALIQKKFKRTISNAKNG
SITEARKRILARLPISAQSCSSSPYLDLFLFSYDEKFVSVMERPKGCGDH
PIQFYDRNTGRLMFKIYTGLQNHPSPPTSAKRLVAFVFHPTDPFVISVQR
TLLDYVVNFHVRKAETMETDERCFICATFVNNANQPWSGTIQERMSRLIS
VNQTVKHSSTIISDILSRILNKTVMQEETICRICFNLLNDIDYHLKEAQE
KTDEITCKFLDKEKDPNKYKPQPIITASTEGGTSSTPLKAINASSKKSSS
KKRKSESQNGGEADETLTEDEMSVNSLNKNKQKLLISVLHPNKKSRLAAS
SSKEQKHDEDREGYRNDEEDEDEEDGDQEDEEYVAPPRKHKKSKKKRRKG
SSQRKENIENRSEFVTVNMDDLGDLFSKPNEVHIAKKSDPLEEEVKMECT
LCEKIFKRKSNLQIHLERVHQVNSHVEFFGEEIPETHCCDLCPREFVNEK
SLLQHRAEHTLPPDTSQSNHTTKESSESSKAKCPKCDKTFKRAFNMRIHI
DRHMNVHGKGKNFKCEDCGREFTNRDSIILHRKQHNQQRTHFCNICHKGF
YKASCLTRHTRTHTGEKPFKCEFCGKAFTQSTTVKVHRIKCGKKHDSNEE
EDA

mRNA from alignment at LSalAtl2s781:205091..212596-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000011335-707182 ID=EMLSAT00000011335-707182|Name=EMLSAT00000011335|organism=Lepeophtheirus salmonis|type=mRNA|length=7506bp|location=Sequence derived from alignment at LSalAtl2s781:205091..212596- (Lepeophtheirus salmonis)
ATGTTAGTAGGGTTAGTATTTATTAATTATTTATCATTTACAAACTATTA
TCGTCTTCCCTATTTTTTATATTTATACACGAATAGCCCTCTGTTGTACT
ATTACAATACTACTACTAATAACAAAGTTACAACTACTTCAATCTTTTTT
ATAAAAATCAACAACGTGGGTAATATTAATTGTTTACTCAGTCATCAATC
AAATCATAGGTACTTTAGACTGCCCATGGATATATTAGGACTCAAGCCCT
GGTTACTTCGGCAATGTGAGACCATTGGCCTCAAGGCCCCTACTCCCGTA
CAACAAGCTACTGTTTCTAAAATTTTGAAAGGGGCTAATGGAGTGGGGAT
TGCCAAGACTGGCTCTGGGAAAACAGCAGCCTTTGCTCTTCCCATTTTAG
ATGCGCTTTCCGAGGATCCTTATGGAGTATTTGCTTTAGTTCTCACTCCT
ACACGTGAATTGGCATATCAAATTGGAGACACGTTCAAGATTCTTGGAAA
GCCGCTCAATGTTAAAGGTAAATTCGAAGTTTCCACTACTTAAAAGTTCA
ATTTAATTTCATCTATATTGTAATATTTGTTTTCTTCACATATGCAGTAT
CGATTATCGTTGGAGGTAGAGATATGGTGATGCAAGGGTCTGAGCTCTCA
ACCTCGCCTCATATCCTCATTGCTACTCCGGGACGTTTAGCAGATCATTT
ACAGAGTATAACGAGTTCTAAACTCCTTAAAAAGATTAGGTTTTTGGTGA
TAGATGAAGCAGATCGCCTCCTTGAAGGAGGATTCGACGAGCAACTCTCA
CAAATATTTACTGCGATTCCCTCTGAAAGACAGACACTTCTCTTCACGGC
TACACATACTGAAGCTCTAAAGGACCTAATAGAGGTTAACAGTGATAAAC
AACCCTTCTTTTACCGAGAAGGCGAGGACGATGCATCATCTCTGACTGTT
AATACCTTGGAGCAATACTATGTACTAACACCCGCTGATTTTCGAGATGC
ATATCTCGTTGGAGNTGATCATGAAATGCCAGGAGGAGTCTCCCAATGCA
TCCTTTATAATATTTGTTAAAACCTGCAAAATAGCAGAGCTACTGAGTAT
GACCCTTACTAAATTAGGCTTTTCCAACGTTTCCCTCCACTCTATGAAAC
CTCAAAGAGAACGCCTTCAGTCTCTCTCGCGCTTCAGATCGCACCTTGCT
AAGATACTGATTGCTACTGATGTAGCAAGCCGAGGGTTAGATATTCAACA
AGTAGAGTATGTCATTAACCACAATATACCTACAGATGCAAAAGATTATG
TTCATCGAGTGGGTCGAACGGCTCGTGCMGGRCGGRAGGGRAGKGSTATA
TCCCTTCTTNCTCCTCATGACGTTCTACTCATTCAATCCATTGAGGAAAT
GATTTCATCGAAGCTCTCCGAGTTTAAAGTGAGTGATAAAAACATTACTG
AAATAGTCGTACAAGTCAATGTGACGAGGAGAGAGMAAGACATTAAATTA
ACAGAGGCGGACTTCGACGAAAAGCGAAGACTGAATAAAAGAAAGAAACT
CATTGAGCAAGGGATTGATCCAGATGAGTTTGAGAGAGAGCAAAAGAAGA
GACGGAGACGAATGCAGAAAGAGGAACAAAGGGAGAGAAAGAAAAAAAGA
TTGGAGAACTCAGGGGATCAAAAGAGTTTGCCATTATCTCGCTGATCGTT
TCATGTTTTATAAATTATATATGTACATAAATATGAATTATATCCTATAA
ATGTATTAATTCCAAATGGAACAATTTTTGAGTAATTATTAGTAGTAATT
TTAGTTCTGAAACACTCGATATGAGACTCTTCCAAAAAGAAGGAAGAGAT
AAGGGGGATTTCTATTATCATTTGGTAAATTGATGTCTGTTTAATATATA
CTATGGGTAAATTATTTAAAAAAATTAGTATTACGATCATGTAAAAGTGG
AATTACTAATGATACTCAATTTCATAAGGTACGAAACAGGATCGAGTGTG
GGAGGGGGATATTTACTATTTAGCTAGAAAAGAGAAAGAAATGAAGTTGA
AGCTAGGGGAAGAGTCCACCTGAGAAGAGGAGGGGAGGGGATGTCTTTCT
TTCTTGCTCTTTCTCTCTCTCTCTCTAGTTATTATTATTACTTAGTTATC
CGATCCATGGGCTTATTCCCTTTGACTCCCTCTTCTACATATTTTCATGA
TTGACGTCTCTACGCAGTTCCACAATACAATTTATTGGATTCCTAGTTCT
ATTATATTGCCATATTCCAAATCTATTCTATGATTCCATTTTCATGGAAA
AAGACACAGTTCCGAGTGAAGTCAAGGCGGAGTCCTTTTGACGATGAAGA
TGTTGAGGGATTAGAGGAAGGTCCATCTACAAGTAGGAAGCGTCTTGCCC
TAGAAGATCCAAAGCAACTCTGTTTTCGACTAAAAGAAGAAGGGATTCAA
CTCGCTTTGGAAAATAAGCTCTGGTCGGCAGTCCGTACGTGGGATAGAGC
CCTTGATATCGACTCCTCAGACACGGAGTTGAGGAGTAGGATTGAGGCAA
GTGAGGTTGTGGGTTGATGGCCTGGGGCATTACAGTCACTTGCTACTCTC
AACTAAGTCATTGATTCATTGACACATTTCAGGAAATGAAGGCTCAGTCC
TTTATTCAGCTCCACGAATGGCCACTTGCAATTGAATCTGCTCGCTTTTC
TCTTCAATCTGGAGGCTCAAATTACTATCCTGCATGGCAAACTCTCGGTA
GAGCCCATTTAGGTACTGGGGAGTTATCTGAAGCCCTAGCAGCCTTTAGC
AAAGCTTTACATCTCTGTCCAGATGACGTAGAATTATTCTCTGAGGACTT
CCTTTGGGCTCTCTCTCTTAAAAGTCGACATGACCTTCACCAAAACCCAA
AGTCTGAATCTGATGACTCGACTAATACATCGAGAGATTTGGGGAATTCA
ATTCAATAGAATGCCAAATAAACTCAATACTCACAAAGGATTCTATACAA
ATGTATTACCTAACTTTACTGTGATGAATGTGGACAAACCACCTTGTTAT
TTAAGAAAATTCACTCCAGATGGAAAACGTTTTATTGCATTTAGTTCATG
CCAGMCCTTTCTGGAAATTTATTGTTATAATGGGCCTGCCTCCATTGCAG
ATCTTATCTATAATACACCAGACAAGAAAATAAAACAAGTCGCCTTCAAT
CGTTTTTTCAAGCTAGGAAAGGATAAGTTTTTGAATTTTAGACAGACCTT
AATTCGTCATAACTAATGTTGATTTAAAAACAAAATTATGTAAAAAACTA
ATTTATAACTTTATCTATCACTTTCAGAGTGGAGAGTCAAATTAAGTTCC
AACGGAGAGCAATTAAATCGTGAGTGTTCTTTATTCTTGGATGGAGGAAA
GTTCATCATTGTCGGCTCAGCTTGTTATCTACCACAAGAACATTTAACTC
TCCGTCAATATCATAAAAATAATGAATCCTTGGCTCCTAATCCCAGATAC
CCGTTGGAAAATTATACTTTATACTGTGTAAAAACAGACTCTGGAACGTT
AATTGATGAGGTGTCTCTCAACGCTGACAAAGTGTATTTGAGTCATAACC
AAGGGATATATTTGTATAATAACTTATTAGCTGTTTTAGGCGTTCAGCAT
CAAACTATTCACCTGTACCGAATGCAAAAGGGCTGCTTTATTCCAATCGT
CAAAATCGGGCGTCTTTTAGAAGACGATGATGAATATTTGCTATCCATTT
CAAGGGAGCATTCACAAAAGGAGTCCTCTATCAATGCACTCAAGCATCGG
ATACTAGTGTTTTTATATCAAAGAGCAATGAAATCTTCTTTGGATCAAAA
ACATCCTGGAGAACTACGGAGATTTTATCAGTATTTCGATCAGTTAAAAG
GACTACGAATTTGGAAGATGCAGTTAATAGATGAGGATCATATACTTTTG
AAATATGCGAGTGAAGAGGTTGTTACTCATAGAAAATCGGAATCTAATTC
TCAACTCTCTTTCTTTGTGATTTATGATCGAAAAAACACTCGGATCTTGT
CTATTTATGATAATAATAGTAAAGAGCTGGTGGAAATATTTGAGCAACAT
TGTGACTTTTTTCGGAATTCTTCAGAGTCAAGAATTGCTTCAAGCCCTTC
AAATAATGTCTACGCTGCCTTAATTCAAAAAAAGTTTAAAAGAACTATAT
CAAATGCCAAGAATGGAAGTATTACTGAGGCTAGAAAAAGAATTCTTGCA
CGATTGCCTATTAGTGCTCAAAGTTGTTCCTCTTCCCCTTATTTAGACCT
CTTTCTTTTTAGTTACGATGAAAAGTTTGTGTCAGTCATGGAAAGGCCCA
AGGGTTGCGGTGATCACCCTATTCAGTTCTACGATAGAAACACGGGTCGT
TTAATGTTTAAGATATACACGGGGCTTCAGAATCATCCTTCACCTCCTAC
TTCTGCTAAAAGACTTGTTGCCTTTGTATTTCATCCTACAGATCCCTTTG
TAATTAGTGTTCAACGAACTCTTTTGGACTATGTCGTTAATTTTCATGTT
CGAAAAGCTGGTGTTCAAGGGGACACATCTCCTAGTTTCTTTTGAAATAT
ATGTACATCCACAAAAAATGGACACGATTTTACAAATTTTTATACAAATA
TCCTTACATGTCTATTTATTCATCTAAATCAATTATTTTATTATTTTATA
GAAACCATGGAAACGGATGAAAGATGTTTTATTTGCGCAACTTTTGTGAA
CAATGCAAATCAACCCTGGTCAGGGACCATTCAAGAAAGAATGAGCCGAC
TCATTAGTGTTAATCAAACTGTGAAGCACTCATCTACAATCATTTCAGAC
ATTTTAAGTCGAATACTCAATAAAACCGTAATGCAAGAGGAAACGATTTG
TCGCATATGCTTTAATCTATTAAATGACATTGACTATCACCTGAAGGAAG
CTCAGGAAAAGACGGATGAAATCACGTGTAAATTTTTAGATAAAGAAAAA
GATCCTAACAAATACAAGCCTCAACCCATCATCACAGCATCCACCGAAGG
GGGGACTAGTAGTACTCCTCTTAAAGCCATCAATGCAAGTTCTAAAAAAT
CTAGTTCTAAGAAAAGAAAATCTGAATCTCAGAATGGAGGTGAGGCTGAT
GAAACCCTAACTGAGGATGAAATGTCCGTCAATTCACTCAATAAGAATAA
GCAGAAACTCCTTATATCTGTACTCCATCCAAATAAAAAATCCCGCCTTG
CCGCTTCCTCCTCAAAAGAACAGAAGCATGATGAGGATAGAGAGGGCTAC
AGAAATGATGAAGAGGATGAAGATGAGGAGGACGGAGATCAGGAAGATGA
GGAATATGTAGCCCCTCCCCGGAAGCATAAAAAAAGTAAAAAAAAACGAA
GGAAGGGCTCATCTCAACGAAAAGAAAACATTGAGAACCGTTCTGAATTC
GTGACTGTCAATATGGATGATTTGGGGGATTTATTTTCCAAGCCCAATGA
GGTTCATATTGCAAAAAAGAGTGATCCTTTAGAAGAAGAGGTTAAAATGG
AGTGTACTCTATGTGAAAAGATATTCAAGAGGAAAAGTAATCTCCAAATT
CATTTAGAAAGAGTGAGTAAAAATTAACACGTGAATGATAGTGGTCCTGT
ATAAAAATATATCCTCCTTTAAGGTGCATCAAGTTAATAGTCACGTTGAG
TTCTTTGGTGAGGAAATACCAGAAACGCATTGCTGTGATCTTTGTCCAAG
AGAGTAAGTATCTTTAAATGCACAATTATATATTAGAAGATTCTTTTTCT
ATATGAGGATTCTAAATTTACAGATTCGTTAACGAAAAATCCCTTTTACA
GCATCGTGCAGAACATACATTACCTCCAGACACATCTCAATCAAATCACA
CCACAAAGGAATCGAGCGAAAGCTCCAAAGCCAAGTGTCCTAAATGCGAC
AAGACCTTTAAAAGAGCTTTTAATATGCGGATACATATAGATCGAGTACG
TTTCTAGTATATTATATTATTAAGGGGTGCAACTTAGAACCAAAATCTGG
AATGAGAAATTTCCAATTTCAATCAATTATCGGCTTTATATTCGTATTTC
TATGATAGAATGAGATATCCTTGGCCTATATTCAAGAGGCTTCATTTGAT
TTATGAGTCTCTATTAACTATTTGTTTAAGATATGGTCTTCTAAATATAG
TATTATTTTTCTTTATTTGTGGTCGGAGTTTTTTGCTACCCTTAGGGATA
TTTGTAGAGCTTGTGAAGGATTGTTTAGAATAATTAATCAATATAAATTT
AAGATAATTCCCTTTCCACTACTTTCTTGGATCTTTTAAAAACGTATTTA
TTTTCTTATTCCCGCCCTTTATTTTCTCCTTCAACGGAATTTCCCAATTT
ATCTTCACTATTCTAAATCTAGTTTTTCCTGGCTTATTTCGAATACCCTA
GGTGTTATTATTCATTATTTTGGCTATTTTCATTGAGGTTTTGTGAAAAA
CAAATCTAAGTATTGCATTATAATTGACCTTGAGTGTTGAAATAAAATTA
AAAAAAAAAAAGGAAAGAATAACACGAAGCCGCCTCACAAATTCGGATAT
TTTTTGTTATAATTTACAAATTCATCATGAAATCATTAAATATAGGTTTT
ATCTTCTAGCATAAATAATATCTATTTATTTCATGAAGAAGATAAAATTA
AATTGTAAATATGATGTTTAATGTTGTTTATATTTGCTGAGTATTACAGT
CGAGAGAAAAAACGATGAGATACAAAGCCGAAAATTCCTCGAATTGTTCA
TCAATGCACATTGATCTGTTATATTTTTTAAACTTTTTTAAAAACCTTAA
TAATATAACTTTTTTTTGGGGGGGGGGGGGGAAGTATTGTTGTTAGATTG
AAGGGTTATTAGTTGAAGAATATAATACAAATGTAATCCAGACTCTTTTT
TGATAAAAATCATGCTGGCTTTCTTTTATCCTGACGAGCCAAATATATTG
AGTGGATGATTTTTATGAACTCATGTTTTCTTCTACATTATCTATCCCTC
TAGGTGCATAATAAAAGTCGTCCATTTGCATGCGATGTTTGTAGTAAGGC
ATTTGCCACAAACTCGGATCTGAAACAGCACATGAATGTCCATGGAAAAG
GAAAAAATTTCAAATGCGAAGACTGTGGAAGAGAGTAAGAGTTTGATAAT
AATAATAGTTATTTAAAAATTAATTAATATTTGTTGTATTTCCCCCCTCT
TTTTAGATTCACGAATAGAGACTCAATCATCCTGCACCGTAAGCAACATA
ATCAACAGCGTACGCATTTCTGTAATATTTGTCATAAAGGTTTTTACAAA
GCCAGTTGCCTCACACGTCATACTCGAACCCATACTGGAGAAAAACCTTT
CAAGTGTGAATTTTGCGGAAAAGCTTTTACACAGTCCACGACGGTTAAGG
TCCATAGGATTAAATGTGGGAAAAAACACGACTCAAATGAGGAGGAGGAT
GCTTGA

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