EMLSAT00000011343, EMLSAT00000011343-707190 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011343
Unique NameEMLSAT00000011343-707190
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s782supercontigLSalAtl2s782:245167..247737 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011343 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011343EMLSAG00000011343-694109Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050698EMLSAE00000050698-759626Lepeophtheirus salmonisexon
EMLSAE00000050699EMLSAE00000050699-759627Lepeophtheirus salmonisexon
EMLSAE00000050700EMLSAE00000050700-759628Lepeophtheirus salmonisexon
EMLSAE00000050701EMLSAE00000050701-759629Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775217auto775217Lepeophtheirus salmonispolypeptide
EMLSAP00000011343EMLSAP00000011343Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011343

>EMLSAP00000011343 ID=EMLSAP00000011343|Name=EMLSAP00000011343|organism=Lepeophtheirus salmonis|type=polypeptide|length=717bp
MKKVLRFVKKKRLSSPSPVPRSPSLGSIVSCYEQNPDSSYFKSNALHAAV
YGEDLEKVKKILGRTRYDVTLADNYGRTPLHLASSSGNVAILWQLLHARA
GDVPLHRTDMKGATPLHRAVDGGHAEAAEMLLERGCPLDISDEMGNTVLH
LAIRRDAKDLTSRLLRKGANPDILNSKGEXPMLEAIRLGRIQLAQNLLRS
GASPHTPREKDGMTPLMLTCRIPDLNFAEILLDYDANPEELNPDGKSAIH
FAKETDCPNLVETLERAAYIRKNATYESEDNSFDDVLFDGDLLDEHEYSN
TQIDNQGPSNVVKKLQVESKNVREAIENLSSWSSSTASPASAGAKARTVM
DLSKMLPESPSDVNKPNVLSTKVIIGSPNSSHVPNEDFYDEENSQNIYDV
PEDVKEEESSHWSSSVGSHGKNSKITSPKRNETIQNPSNEDFGSLNDRRK
SFPTLNELKNDTKTSATFTSADHTSPSKYKTFSTMRSAKNTVLLESEDNQ
VVKQEALCHDATISEDNWDSDDEIEPPLSLDVSSLKSQVEREKEKKLAFK
EELQRTRDDQEKLSDENEELRDEISKVQYDNKELKKELVEVTVGTRHKEE
SIQTLEQKIKQLTEDEVVKSKEITKLKKEIDQLLSQLETMESVKQHEISD
KKSALNRYQDELEDKSNKISSLEQEIDRLKIENDKIEELSKIIHNKESVL
DKTSYQHGNXYKGSLRS
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mRNA from alignment at LSalAtl2s782:245167..247737-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011343-707190 ID=EMLSAT00000011343-707190|Name=EMLSAT00000011343|organism=Lepeophtheirus salmonis|type=mRNA|length=2571bp|location=Sequence derived from alignment at LSalAtl2s782:245167..247737- (Lepeophtheirus salmonis)
ATGAAGAAAGTACTCCGGTTTGTCAAAAAGAAGCGTCTATCCAGCCCTTC
TCCTGTTCCTAGAAGTCCGTCTCTGGGATCTATTGTATCTTGCTATGAAC
AGAATCCAGACTCATCATATTTCAAGAGCAATGCTCTCCATGCTGCAGTC
TACGGTGAGGATCTTGAAAAAGTTAAAAAAATCTTGGGACGAACACGTTA
CGATGTAACCCTTGCTGACAACTATGGTCGAACTCCCCTGCACTTGGCCT
CCTCCAGTGGGAATGTGGCTATTTTATGGCAACTTCTCCACGCGCGAGCA
GGGGATGTTCCGCTTCACAGGACAGACATGAAAGGAGCAACTCCGCTTCA
TCGTGCAGTTGATGGAGGACATGCTGAGGCGGCTGAAATGCTCCTAGAAA
GAGGATGCCCTTTGGATATATCAGACGAAATGGGAAATACTGTTCTGCAC
CTTGCTATTCGAAGAGATGCCAAGGATCTAACTTCTCGACTTCTTCGTAA
AGGAGCAAACCCAGATATCTTGAATAGCAAGGGAGAAKCTCCAATGCTTG
AAGCCATACGTCTGGGGCGTATTCAACTTGCACAAAATCTATTAAGAAGT
GGGGCGAGCCCACATACACCTAGAGAAAAGGATGGCATGACTCCTCTCAT
GTTAACGTGCAGAATACCAGACTTGAATTTTGCAGAAATTCTACTAGACT
ATGATGCTAATCCCGAGGAATTGAATCCTGATGGAAAAAGTGCAATCCAC
TTTGCAAAAGAAACTGACTGTCCTAATCTTGTTGAGACCTTGGAACGAGC
AGCATATATACGTAAAAATGCTACGTATGAGTCTGAAGATAACTCATTTG
ATGATGTACTATTTGATGGAGATTTACTTGATGAGCATGAATATTCCGTT
AAGTTTTTTTTTTAAAGAGTTTAAACTTTTTCAAAGATTGCTTAGTACAT
TTTTTTAGTAACTTTTTTTAATTAATAATTCGTAATAATAAAAGTAATGA
ATGTATTGTAGACTATTAAAATCTTAGTTTACAATTAAGCAATCAGAATA
AAGGACTACTCTTCTTGTGAGGGTAGTTTTCAAGAGTAATTGATGTAGAA
TATTTTTATTTTTAGAATACTCAAATTGACAACCAAGGTCCATCTAATGT
TGTCAAAAAACTTCAAGTTGAATCAAAAAATGTGCGTGAAGCCATAGAGA
ATCTAAGTTCTTGGTCTTCTTCTACCGCTTCTCCTGCATCTGCTGGTGCA
AAGGCCCGTACAGTCATGGATTTATCAAAAATGCTTCCAGAATCTCCATC
AGACGTTAATAAACCTAATGTTCTCTCAACAAAAGTAATTATAGGATCTC
CTAATTCTTCTCATGTGCCAAATGAAGACTTTTATGATGAAGAAAACAGC
CAAGTATTCAAATTTATATTTAAGATATTTATATTCAGATTTATTGTTTG
ATGTACACTATGCATTCACGCCTAATCATCGAATATCTATAATTTAATTG
TTCGACGACAATTGTGTATTTTAATTAATATTTTTAGAATATTTATGATG
TTCCTGAAGATGTCAAGGAGGAGGAGAGCAGTCATTGGTCCTCATCTGTT
GGAAGCCATGGTAAAAATTCAAAAATAACCTCTCCCAAGAGAAATGAGGT
AATTATTTATATTAGTATAAGAAAAGTGGGAGTAAGTAAATAACAATCTC
TTTTACTTTTCAGACAATTCAAAATCCTTCAAATGAAGATTTTGGATCTT
TAAATGATCGGCGCAAGTCTTTTCCTACTTTAAATGAATTAAAGAACGAT
ACAAAGACGTCTGCAACGTTCACAAGTGCGGATCACACATCACCTTCAAA
ATATAAAACATTTTCTACAATGCGTTCTGCAAAGAATACAGTTTTGTTAG
AGTCTGAAGATAATCAGGTGGTAAAACAAGAAGCTTTATGTCATGATGCA
ACCATTAGTGAGGATAATTGGGATAGTGATGACGAAATTGAACCACCTTT
GTCCCTTGATGTCTCCTCATTAAAATCTCAGGTTGAGAGGGAGAAAGAAA
AGAAACTTGCATTTAAAGAAGAACTTCAAAGAACAAGAGATGATCAGGAG
AAACTATCTGATGAAAATGAGGAATTAAGAGATGAAATATCTAAAGTACA
ATATGATAATAAAGAACTGAAAAAAGAACTAGTTGAGGTGACAGTAGGCA
CTCGTCATAAAGAAGAGTCGATTCAGACACTTGAGCAGAAAATTAAACAA
TTAACAGAAGATGAGGTTGTTAAAAGTAAGGAAATAACAAAGCTCAAAAA
AGAAATTGATCAGCTATTAAGTCAATTAGAGACGATGGAATCAGTGAAAC
AGCATGAAATATCTGATAAAAAATCTGCCTTAAATAGATATCAAGATGAA
TTAGAAGATAAAAGTAATAAAATTTCATCTCTTGAGCAGGAGATAGATAG
GTTGAAAATTGAAAATGACAAAATAGAAGAGCTCTCTAAAATTATACATA
ACAAGGAGTCTGTTCTAGACAAAACAAGTTACCAGCATGGAAATNNNTAT
AAGGGATCACTCAGATCTTAG
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