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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s787 | supercontig | LSalAtl2s787:124214..130248 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011375 >EMLSAP00000011375 ID=EMLSAP00000011375|Name=EMLSAP00000011375|organism=Lepeophtheirus salmonis|type=polypeptide|length=464bp
MLGDGDLQHPHDHPVSQLNMTNCNTLHVFPRKSSRWDRGDKQYLYDVNGL
EYLDGINGKTAHVGHCHAQVVNAVQNQMAKLGTMRGVSNSEHYVNRITSY
LPERLSVSYLCNSGSEANDLALRLARRYTGAEDVVVISGCYYGGTCSLVD
ISPLLFSGKKLPKDFVHVVKPPDEYRGKYSEISDPDTRGELYARDIRLQI
KEDIIARGKKLAAFIYEPFFSNCGIHIPSKTFYKELFRTIREFGGLVIAD
EICSGFGRIGTHFWSYELFDLXPDIVTAGSSMGNGLPMGAVFCSREISDK
LGYYYSTCGGNLVSCAAASSVLDXIVNEKLMSSAKNVGKDKYPNNVGDIR
GQGLLWAIEIVSDRISKTPDSSLTKKIMDGLASKQVLINVGGNYENILLF
SPPMCFNIENSQRFIRSLDDVLNFSLSLIRTLERSVKRVADEEEEDLFEF
KRVKLEMEKFEELD back to topmRNA from alignment at LSalAtl2s787:124214..130248+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011375-707222 ID=EMLSAT00000011375-707222|Name=EMLSAT00000011375|organism=Lepeophtheirus salmonis|type=mRNA|length=6035bp|location=Sequence derived from alignment at LSalAtl2s787:124214..130248+ (Lepeophtheirus salmonis)
CTGACTACTTCCCGCGCTAATTTCGTCATGGCATCTTATTTTCACAAAAT
GTTATTATTAGTATCGTTCTTGATGAACTAGCTAGCAAAGTCCTAACTAG
ATGTAATATGGACTCGGCTATGTCGCAACACCCTTGAATTATATTCAGAA
AGTCACGAAACCTTCTAAACATTTACTATACAAAAGTAATTATTGCGTAA
ATCCTCTAATAATAAATTGATTGGAGCTACTAAACCTCTTATTTTAACCA
TCGTCATTTTATGATAATCCTAATGGCGTCAGTGAATAAAATAATATTCA
GAATTGCAAAACGAATTTCGACTCTATGTAAGACTCATTCAATCAAACAC
TATCAAGCAAGTATAAGAAAAGGGGGATCCAAATATTTACTATATTATTA
TTAACTGCGAATTATGAATTACTAGGGAATATTTTGATTTCCAAAAAATA
GGACACTTATCAACATAGTTTTTAAGACCCTTTGAAATTAATTAATTCAT
TAAAATATAAAGAATAACTTATCTACAGAATGTGAAAGGAAGACATGCCC
AGAGAAATAAGGAAGGTTGCTCATCCTATAATAATCCCCCTAATGATATT
CATATATTTTACTTATACAAAATCTCATTGTAATGTATTGTTTATATAGA
GGCCTAGAGGATTCATGCTCCCACTATGTTTCTTTTTTAAATATCGCGGA
AAATGGACCACAAAAATAGATCCTTACTAGAGATATCCCCTCCCCACAAT
CTTGTGTGCAATAAAGAGTGGAAGGCGTTTACATCTTATAAGCTCTGGCA
TGCCACATACTGCAGTAGTACTAGGTATTGCCACTGCCAGGTGTCATAGT
CCATAACGATAATATTTATCAAGGATTTTGCGTTTTAATTCTTTGAGCCG
AGTTGCGTGATTTCAACTTTCACATTCCAGTTGTACCTGTCGAATGAGGT
AGAGGGAAATATATAAATAATTTTGGGGGTTACATAAGAAGAGAGTGACG
TCACCAAGGAGCCAAAATAAGATGCAGCGAATATGTTGATTTAATTTACA
TAAGTGTAAGAACTTATGTAAGTTGAATATAACTTAAAGGTTCTTGGATG
TAGTAATAACAAATAATAATATAAATATTAGAAAGAGAGAATCACTATCA
GAATGTTGGGTGATGGCGATTTACAGCACCCCCATGATCATCCTGTGTCA
CAATTAAATATGACCAACTGCAACACACTTCACGTTTTCCCTAGAAAAAG
CTCTCGATGGGATCGTGGGGACAAGCAATATCTCTACGATGTTAACGGCT
TAGAATACTTGGATGGAATCAACGGGAAAACGGCCCATGTAGGACATTGT
CATGCACAGGTAAATCATGAGAGACTCTTTGTCTTATATTTTCACTAACA
AAAATATTGATAATTAGCTAGAAATATTAAATCCGTGATTGTTTTTTCTT
CAATCCCTCAAAGGTAGTGAATGCAGTTCAGAATCAAATGGCGAAATTAG
GCACAATGCGAGGCGTCTCAAACTCTGAACACTACGTAAATCGAATCACA
TCATATCTCCCAGAGCGTCTCTCCGTATCTTATCTATGCAATTCCGGAAG
TGAGGCCAATGACTTGGCTCTTAGGTAAGGAGTCGTATAATCACATCATC
ATCCCTTCTCTGAAATAATATCTCTCCTGGAAAGTCCACAAGTCCCTTCT
TTCGAGCCCTTAGTAGTATTCCAACCACCTTATTGCTGATCCTCACATAA
ATGTCAAAGAGTTTCCCGAAGGTGATTGAGCCTCCGTTCATGGCTATGAT
GTCAAGGAGCTCCTTTATCTCTCCTTCAATATGATGGTAGGCTTTGACTC
CTCGCTGAGCTGATCTTCTTGTATATTCATTCAATCCATCCTCGCCCATC
ATTTTGTAAGTTGGAAATCTGCCAAAGATATGGGCATATAATAGATTGCT
ATATTTTTCCTCCTTTTCCTTTTTGTTTGTAGCTATGTATATTATGTGAT
AGGATTTTTTGCTTCGTTACATGTACAAATATAGTGAATCAATATTCATA
AAAGTTCAAATGATAACGCATTTTACAATGACAAGGATAAATTCATTTGT
CGTCTTTAATTAATTCTATTATGATTATTATAAATTAAAATTAGAATACT
TTTAGACAAAATGTGTCTTTGATCCCTAAGCTCACTACGCGTTATTCCTC
ATTATTTCAATCTGAAAACTTTTTATTCTTGTTGAACTCCTCATAAATAT
CTTCCATGGATCTTTTTAGATAAATAGGAGTGTTATCATTTTGTCCTTGA
AAGAGGATTTCGGGCTCGAAGTCAACTAATCCATATTTCTTTGCTCTTAG
AAGTATACCCACGACTTTATCAGAAATTTTTGTATAGATTCGAAACAAAT
CTCCAAAGAGCATAACGGACATACTACTCGCCCCATCATCCAGTCCGTAC
ATGTATAATATCTCACATAGCTCTAAAATCTCCTATCAAATACAAATAAT
CATTTTTTTCTTTTTGATATTAATTTGAATGCATGCAATAATATGATCTA
TATAGCAATGTAGTTCGTACTTTATGAACGTGAAATTGGGCTTTGATMCC
TCTTGCCTCAGTTCGTGTTCCTTCTTGTGGGCATCCATAGCCTGGATCCG
TCTTTTTCAATGGTTTAAAATCCTTTACAAATCTACTCTTTGACATATTT
TCTAGGAGATGATTCTTCCTTGTCTGAAGATTTGTGCCACAGTGCTTGGA
TTCAGTCCATTCACTAACAATAAGTGGACTTGTGAATGTTGAATTAATAT
TTGCATATACTTACTTATCTGGATGATATTTTGACTTACCTGTCAGATTT
GGAACTATCATTTTGCTGTTTGGTGAGAAGCATAGCTGTATTCTCTGCTC
TAGAGCCCTTGCAAATTCCTATGGATGAAAAACTCATCTTTTGTTATGAA
TAATTTTTACTTCAATCCTCTAATTTTAACATTGAATAAAAGCGTATGAA
TATGATCATTTGACATTTAAAAATTATTTTTAGTAGTCTTATGCTAAAAA
AGCTTTTTCAATACTTAACTGCATACCTAGATATGAATAAAACTTTTTAT
CATTACATGCTTTAATATAACAATAAGGTTTAGGTAAATCTTACTCCTCC
TTTCAGATTAGCTCGTAGATACACAGGTGCCGAGGATGTGGTTGTCATAT
CAGGGTGTTATTACGGGGGCACTTGTTCCCTTGTCGACATTTCTCCATTA
CTTTTTTCAGGGAAAAAATTACCCAAGGATTTCGTACATGTAGTGAAACC
GCCTGATGAATATAGAGGAAAATACTCTGAAATATCCGATCCTGATACTA
GAGGCGAACTGTATGCACGGGATATTCGACTACAAATTAAAGAGGATATC
ATTGCTCGTGGAAAAAAACTTGCTGCTTTCATTTATGAACCTTTTTTTTC
CAACTGCGGAATCCACATACCTTCGAAAACATTTTATAAGGAATTATTTA
GAACAATTCGTGAATTTGGAGGCTTAGTGATTGCTGATGAAATCTGTAGT
GGATTTGGTAGAATTGGTACGCACTTTTGGAGCTATGAATTATTTGATCT
CMCTCCTGATATTGTAACCGTAATATATATATATTTTTTTTTTTAAAGTT
TTATTTCTAATTATAGGCTTTACCTTTATTACTCCCTAGGCAGGAAGTTC
CATGGGTAATGGCCTACCCATGGGAGCAGTCTTTTGTTCACGAGAAATTT
CAGACAAATTAGGATACTACTACTCTACTTGTGGTGGTAATCTTGTATCC
TGCGCCGCTGCTTCTTCTGTATTGGATGKTATTGTAAATGAAAAGCTCAT
GTCTTCTGCCAAAAATGTGGGGAAAGTATTGGAGGATGGATTGAAAATGC
TGATGGKAATATACCCTGAGGATTAAGGGTAGGGATTTCAAAAGTAATTT
TCTTCTTTTTAAGGATAAATACCCAAACAATGTCGGTGATATACGTGGTC
AAGGACTCTTGTGGGCGATAGAAATTGTATCCGACCGAATATCTAAGACG
CCGGACTCTTCACTCACCAAAAAGATCATGGATGGTCTCGCATCTAAACA
AGTTCTTATAAACGTTGGGGGAAACTATGAAAATATTCTCTTGTTCAGTC
CACCCATGTGTTTCAATATTGAAAACAGTCAAAGGTGGGGTTTAACATCT
TAAGAGGATACTTAATAATAACTCCTACTCTCCTATTTCTAGGTTCATTC
GTTCACTTGACGATGTCCTTAACTTTAGTCTAAGTCTAATCAGAACACTA
GAAAGAAGCGTCAAGAGAGTTGCTGATGAAGAAGAAGAAGATTTGTTTGA
ATTTAAAAGAGTTAAGCTGGAAATGGAGAAATTTGAAGAACTCGATTAGA
TAATTATGATAAGTCACCAGAGCCCTGTTTGATTTTAATACCTTATAGAA
TCATTGGTAGTGCAGTCGTAAAGAATTCTTTTTGGGTAGTGTTGTTGAAT
TTTCTTCTCTAAATTTCCGGACTGACATGCCATTCCTTCCCACTCAAATA
TGAAATGACTTTTCTATAGAAAAAACGTATTTATTTTTTCCAGTCAACTA
TCCAAATTTTTCGACTCAATTAATCAATAGGGGGTGTAAGACTAACTCCG
ACCTCCTGGCCTGGCTCATTGGTATACATACTTTTAATTCTTATCACAAT
TCGCTATACGGTCATGGTCAACCTTAACTCATTCTGACTTCTTCATCTAA
TTCGTTAGATTTCCATCATCGCAATATTTTTGTTATCAAATAACTATTCA
ACCCGCAGTATTTTTTATAAGTGATTTTGTATGGTTAATTATATTTATGT
AAAACAAATCTATATATTATACTTATATAAATGAATAAAATACTTTGTCT
ACTGTTCACAATGGTGTTAATTACTTTTTGGAGAAGAACGAGGTAATATT
CTTTGATCCAGTTGCGGATTTAGCTAACGCTTTCTGTTTGGAATTCTGAG
GTAGAGAGGCGCGAGTTTCCTTCGGAAGGGATAAATAATCTTCTTGGGGT
GCAGATTTAACCCTCTTTAAGCCTTTACTACTACCCTCCCCCGAGGAAGA
ACTCCGCCTTTTATTGGTTGTAGTTTCATCGGTGATGATATTCATATGTG
ACTTTAGTTGAATTGAAGTCTCTTTATCAATGTAATCTGAAATTAATCCC
CAGGAATACTTGAGATAATGTTCCTCAACTCCTTTAGTAGATGAAGACTT
TGAAAACCCTTCGGCTGAAGTTGAGTCAATGTGAATAGAATTTTCAGATA
AAACTTTAGCAATTGCCTTCACTTTTTTAGATAAATACTCCATGCACTTA
TCATCGTTTAATTTCCATACATTAAGATCAGCATTTCCGATAGGATCAGC
CACGAGAGGCAAACGGTTCTAAAATGGAAGAGTAAGGTTATATACCTTAT
TAGCTATTCTTATAAATATTCCAATTTTTCATCACGTAAATAAGGGAAAG
CGAACCTTTAGAAAGGGAGAGTCTGTGATTCGTGATTCAAGAATTAAGTG
ATCCAGAGGTACCCTTTTCCCTTCTTTTAAGTAAGGTAAAGCAAGAAATA
TGGGATCAAACTCTGTTGCAATCCAAAGTCGTCCATCAGACTCTATAACG
TCTCCAATGAACCATGATCTATAAGAGTCGGAATATGCTCTTAATTCACG
TAAATCACCTTGAATCGTACTCATGAAGAGTGATTTCCGACCATTTGGAC
TCTTTAATGAGAAAATATCCAAAGATTCTTTTGAGACATCCTCTAAAATA
ATATAAAAATCGTAAGGTATCCAAATTCCAAAAACAGCATGATCATCACT
GATCCCTTACGCTTGGGTACGACAAAAATGGAGTATTTCCCCTCCTTCAT
TGAAGCTGAATCCTTATTGATTCGACTTGGCATTCTTTACGCGGGAATTT
TCCAACAGGAACTGGGAGAGGTTGAGTGAATGTTTAAATTTATTTTTTAC
AATGATCGAATCTTTACTAAAGTAGTACAGGCTGC back to top
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