EMLSAT00000011378, EMLSAT00000011378-707225 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011378
Unique NameEMLSAT00000011378-707225
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s787supercontigLSalAtl2s787:132822..135107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011378 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011378EMLSAG00000011378-694144Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000050867EMLSAE00000050867-759795Lepeophtheirus salmonisexon
EMLSAE00000050868EMLSAE00000050868-759796Lepeophtheirus salmonisexon
EMLSAE00000050869EMLSAE00000050869-759797Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772961auto772961Lepeophtheirus salmonispolypeptide
EMLSAP00000011378EMLSAP00000011378Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011378

>EMLSAP00000011378 ID=EMLSAP00000011378|Name=EMLSAP00000011378|organism=Lepeophtheirus salmonis|type=polypeptide|length=504bp
MPTPREVNPSNGYFSMGGDTLRVPIKLFAENRRRLVNSLKNEAALPEHPV
ILLEGGQDQGICAGDSSDVGPIFKQEGYFHWAFGVLEPDCYGAIDVESGN
SILFVPKLPDEYRIWMGPIPSLEEWKQRYEVDEAVYIPDMKDYLWNLHLK
GSSHLLVLDGINSDSKKQVIQAAFNGISEFKVNKDLLFDVFAECRVIKSE
TELEVMRYATRMSCEAHKAVMKMISPGMREYQCEAAFLNHIYLYGGMRHV
CYNCICGSGSSGAVLHYGHAGAPNDQPIRQDDMVLFDMGGEYYRYCSDVT
CSYPANGVFSLKQKLIYNAVLKANRAVLHTIRPGVSYKAMHELANRVILE
DLLDGGLLKGSVEDMMKVNLCGRVFQPHGLGHFIGXXVHDVGGYLDGHPE
RPEGLGLGNLRTARVLKSHMCLTIEPGCYFIDYLLDKAYETSELSQFLVK
DKIEEFRGFGGVRIEDDVIITETGVELMSLVPRAVEEIEAFMRGEDVKIE
AYKS
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mRNA from alignment at LSalAtl2s787:132822..135107+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011378-707225 ID=EMLSAT00000011378-707225|Name=EMLSAT00000011378|organism=Lepeophtheirus salmonis|type=mRNA|length=2286bp|location=Sequence derived from alignment at LSalAtl2s787:132822..135107+ (Lepeophtheirus salmonis)
CTATATTATAAAATGAACTACCTACTAGCTAAATGCATCATAAGGCATCT
GTGCTCATATACATAATCCTATTATTAAATTTGATACAATACTAATATAC
TTTTGTAGTTTCGCGATTTAAAAAACTGTATAACATATAAGTCCAGGTAA
AAATCACTTTGTCATGTTTGTTGTCCATAGTAGAATAAATCAAAATAAGT
TTCTCTCCATCTTTTGTTATCTCTAGCTGGCTCTTGACACAGAGACTAGA
AATTAAGATAAGGGTGCGACAGAGGTTCTATCATAGAGAATTATTAACAT
TTACATAATACATCTTTCTCTACACATTAAGCAGTATAGTACAAGATGCC
TACGCCACGAGAGGTAAACCCTTCAAATGGATATTTTTCCATGGGAGGAG
ACACTCTTCGAGTTCCCATCAAACTCTTTGCTGAAAATCGTAGAAGACTC
GTTAATAGCCTTAAAAATGAGGCTGCTCTTCCGGAACACCCTGTTATTCT
CTTAGAGGGAGGTCAAGATCAGGGTATCTGTGCTGGAGATTCCTCGGATG
TGGGACCTATTTTTAAACAAGAGGGGTATTTCCATTGGGCCTTTGGTGTC
CTTGAGCCAGATTGCTATGGAGCCATAGATGTTGAGTCTGGAAATTCAAT
TTTGTTTGTTCCTAAACTCCCTGATGAATATCGTATTTGGATGGGCCCAA
TTCCAAGTCTCGAGGAATGGAAACAAAGGTACCTTGAGTGAAATCTATGA
GACCCCATGGATTTGATAATTTTATTCATAATAAAAACGTTATATTTATT
GTAGGTATGAAGTGGATGAGGCAGTCTATATTCCTGATATGAAGGATTAT
TTATGGAACCTACATTTGAAGGGCTCCTCTCATCTCCTGGTTTTAGACGG
TATCAATTCAGATTCTAAAAAACAAGTCATTCAAGCAGCTTTCAATGGCA
TCAGTGAATTCAAAGTAAATAAAGATTTATTATTTGATGTGTTTGCTGAA
TGCAGGGTAATTAAGTCTGAAACGGAGCTTGAGGTTATGCGATACGCGAC
TCGAATGAGTTGTGAGGCTCATAAAGCTGTCATGAAAATGATTTCCCCTG
GAATGAGGGAGTATCAATGCGAGGCTGCATTTCTAAACCATATCTATCTC
TATGGTGGCATGCGGCATGTTTGTTATAATTGTATCTGTGGCTCTGGATC
TTCTGGCGCAGTGCTTCACTATGGTCATGCTGGAGCACCAAATGATCAAC
CCATTCGACAGGATGATATGGTTTTGTTTGATATGGGAGGGGAGTACTAT
CGATACTGCTCTGATGTCACTTGTTCTTATCCTGCAAATGGAGTTTTCTC
TCTCAAACAAAAATTGATTTACAACGCTGTGCTAAAAGCAAATAGAGCTG
TACTTCATACCATACGCCCAGGCGTCTCCTATAAGGCAATGCATGAATTA
GCCAACCGTGTTATATTGGAGGATCTTCTCGATGGGGGCCTTTTGAAGGG
AAGCGTTGAGGATATGATGAAGGTCAATTTATGTGGTAGGGTGTTTCAAC
CTCATGGGTTAGGTCATTTCATTGGCTGSGRTGTTCATGATGTAGGAGGA
TATTTGGATGGGCATCCAGAACGTCCCGAAGGGCTTGGCCTGGGAAATTT
GAGAACCGCTCGTGTTCTTAAGTCTCATATGTGCCTAACTATCGAACCTG
GATGTTACTTTATCGATTATTTATTGGACAAAGCATATGAAACATCGGAG
TTGAGTCAGTTCTTAGTTAAAGACAAAATTGAAGAGTTTAGGGGATTTGG
AGGAGTTAGAATTGAGGATGATGTTATTATAACTGAGACAGGCGTTGAGC
TCATGAGCTTGGTTCCAAGAGCTGTTGAAGAAATTGAGGCTTTTATGAGA
GGAGAGGATGTCAAAATCGAAGCGTACAAGTCATAAAAAAGTCTTCAACA
AACAAATCTTACATTTATTTTATTAATTATTATTATTGGTTTCTTGAAAA
TCTTAATTTTTTTTATATAAATTTTATATTTTTATAACGGTTATTTGTAT
CAATTATTTAATGGATAAATTCAATTCTTATGCTAATTATATATAATTTT
TCTTAAATAATATCTCCAATTGGATCCTTTGGTTAATTGGGAATATAAAA
ATGAAAATATTGACCCAAGATAATTAAATGTACTTTTATATCAAAGTTTA
GTTAATAAAATATCTTTAAAATGCAGTCACAGATACAGAGGCTATGATAT
CCTATGGCTATATATAAAAAATCAACAATAAAAAAA
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