EMLSAT00000011810, EMLSAT00000011810-707657 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011810
Unique NameEMLSAT00000011810-707657
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s824supercontigLSalAtl2s824:349124..352439 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011810 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011810EMLSAG00000011810-694576Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000052859EMLSAE00000052859-761787Lepeophtheirus salmonisexon
EMLSAE00000052860EMLSAE00000052860-761788Lepeophtheirus salmonisexon
EMLSAE00000052861EMLSAE00000052861-761789Lepeophtheirus salmonisexon
EMLSAE00000052862EMLSAE00000052862-761790Lepeophtheirus salmonisexon
EMLSAE00000052863EMLSAE00000052863-761791Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776694auto776694Lepeophtheirus salmonispolypeptide
EMLSAP00000011810EMLSAP00000011810Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011810

>EMLSAP00000011810 ID=EMLSAP00000011810|Name=EMLSAP00000011810|organism=Lepeophtheirus salmonis|type=polypeptide|length=315bp
MDILQTILLWILMKFRPIVKWFLRQTTRLCELQRICYGETPGAPRSIAVE
SSLTRSQSPEIFNVCQTLKKIVRDSKGIDEKAERAAIDAAINVILTTKKI
KRELHKQFVQSLRACLTQIYGYKGLXEXVESIRAICYDSDNLEHEKKLVE
LWELLRPDFPLQKRVTKQWQDVGFQGEDPKTDFRGMGILGLENLLYFARE
FNSPAKHILSHSHHPKHGYSFAIVGINMTHMAYTLLQDGSLKSHLWNVTE
GRNTIDHFHHFYSYLFIEFDKFWLSEKPKDIMEFNRIRDLFENDIRNKLR
DSNIRFKINIVIDTV
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mRNA from alignment at LSalAtl2s824:349124..352439-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011810-707657 ID=EMLSAT00000011810-707657|Name=EMLSAT00000011810|organism=Lepeophtheirus salmonis|type=mRNA|length=3316bp|location=Sequence derived from alignment at LSalAtl2s824:349124..352439- (Lepeophtheirus salmonis)
ATGGACATTTTACAGACAATTTTACTCTGGATTCTTATGAAATTCCGACC
CATCGTTAAATGGTTCCTACGACAGACTACTAGATTATGTGAGCTCCAAC
GTATTTGCTATGGAGAGACTCCCGGTGCTCCGAGATCGATTGCTGTTGGT
ATGCCTCCTATTAATGATATGATTTTCATTCCGATGACTTTACTTATTTT
CAGAGTCTTCCCTAACTCGAAGTCAATCTCCAGAGATTTTTAACGTATGC
CAAACCCTAAAAAAGATTGTCAGAGATTCCAAGGGGATAGATGAAAAAGC
GGAAAGAGCAGCAATAGATGCTGCCATTAATGTCATTTTGACTACGAAGA
AGATCAAACGCGAATTACACAAACAGTACTGTCAACGTTTATAAATACTG
ATTCATAGTAGTATAGTATGTGACCAATGCTCTAAAATATCTATGTCTCC
CATAGGTTTGTTCAATCGCTACGTGCTTGTCTTACACAAATCTATGGTTA
TAAGGGATTAANGGARGKTGTTGAAAGCATACGAGCCATATGCTATGACT
CTGACAATTTAGAACATGAAAAGAAACTTGTAGAGTTATGGGAATTGCTT
AGACCAGATTTTCCTCTTCAAAAACGGGTGACCAAACAATGGCAAGATGT
AGGATTTCAAGGGGAAGACCCAAAAACGGATTTTCGTGGAATGGGGATTC
TAGGATTAGAAAACTTATTGTAATTAAATTTTATTCAGCTCATCTTTAAT
TTATTTTATGAATCTTTCTCTCCCTCTCCTTGATTCTCATATTAGATATT
TTGCTCGTGAATTCAATTCTCCTGCAAAGCATATTCTCTCACATTCCCAT
CATCCTAAGCACGGGTAAGACAAGTTTGTCTCGTTTATTATAATTATTTT
CACTTCTTGTTGACTTTGGTTCTGTGTTCTAACACTATTAATACTCAAAC
ACACCTTAAACATTTTTAATATTGTGCAATTTGTGACTTAAAAAATGAAT
AATTTTATTCAAAAAAGACAAAATTGTTATATAGACTTCGCATCATTTTT
TTCAGTTTTTATACTGCCTTGAAAAAGTATAACCCTTCTGTGAGGTAAGA
AAGCTCGAGTACTACATTTTTTATTCTCATTCATGTTTTCAATTAGAGAT
TTTTTATTTTTTTGCTTGTTTTTTTTTTTTTTTAATTAAAATGTGGTTCG
TTTAAGGTTGTGTTGAATATTTTAAGCAGGATTTTCTTTCTTCCCTGACT
CATTAAATATTTTATTAGTTTTTGGAAAATCTTGCTTAAAATAAATATCT
TCACTTGTGTTATTATTATTTATTTTCATTTTTTTGCACTTTGAACTATA
TTTATTCTCATGCTTGACCTCAAAAATTTCAATTATTACGAACTTTTGTT
TATTAATTAATTAGTATTAAAACTGATTATTATGGATCCATTGCATAAAG
TCTTACATATTATATATTTGACTCAATCCATATCATCAACTTGAAACAAT
AGGCTCATATATAGCATACCTACAAAAAGTGGAGTAATAAATTATCCACT
TATTTATATATTANGTCACTTCATTACTGGCAATTATAAATAAGTTGATT
CTAGGGCTTTAACCAATAATATRAATAATTAATTGAYCAGCCATTAACGA
GAAGAGCAATGTTGCTCTCAATTTATTAATGAAAGTTTTATTATTTTATA
TAAAGTAATAATAATTTGTTTTCAAGTGTTGGATATGGAGTACTTTCACT
CGTTGATTTGCTAATATGTAGAGTATCTACTAGTGCTGGGGGTTCGGTTG
GAAATCCTAGACTGTTTTGATACTATTATAATTTTTGTAAGGGACCATGT
GTCACCGCACTAAGCGGCCATATCCAGTTTTCAAATATATAATTCTAACA
AAATAGGAAACTTGGTTTAATGATATTAATCCCCTGATAAAGAGGGTATT
TCTGAAAATGACAATGATTATAATTACTAAAGGGTAATCTTTGGTCTAAC
CTCAACTTTTCAACTGATTCAGTTTTCCCTGCTTTTTGTTTTATAATCAG
TATTTATAGCTACTGCATTGATAATAGACGAACTAAAATATTTAGCTTTA
TTAATATAGATTACTACTGAAATATCGACCAAGAAAAAATATTATAGGAG
GACCGAGTCTCAACACTAGGATCTACTGATTTTCATCCCCCCATATGAAT
AAAAACTTATTTCAACTACATATTATTAAGAATCATTACTTATTCTGCAG
CAAACTGGATCCTTTTTTGAATAATATTTGTTCAATGTACATAGGTATAT
GTTGTGCACAAGTCCCATAATGTTTTATTCAATTATAATACTAACCATTG
CAATACTTATTATCCATTAGACTTTGATACTATCATTTCATTTTGACCTA
TTAATATTATCGATGGAACTACATAAATGACTCTCAAATATCATAATGTA
ACAAAATTTCATTTTTGGCCGGAAGGATTTCCCGGTGGACAAGAGCATAG
GACCAGTGCTATTAAGATTTAGANNNATAAACTAAGTCTACTGGTCTAAT
AATACCATATTGTATTAATAAACGTAGCTGCTATACTTTTGTAATTTACT
TTTTACCTTTATATGTATTTTAAAGTTTATAGATAAATAATTAAGGATCA
AACAACAAAGTATTGATAAGTCCTAAGTCTTTGCTTAACTATGCAATTAA
TGAAATTATACATTACTATGGATAAACCTAGGTAATGTATAAAATTTTTC
CAATATATTATAGAACCGGCATTAATGTAACTGTCAAAGATTACTCCTGT
AATAATATTCCAAATATCTTATAGAATTTTAATAATTGCATTATCATAGC
CACAAGTATATATTATGTACATACTTTGTAAATTCTTTATTTAAAACACT
CCATCCAATTTTTATTGGTAACTTGTATACAACATATATATATATATGAC
TTAAGCATGATTACTATTAATTATATATTTTTTAAAGCTACATAGTCTTA
TTTATCGGTCTTATATTGTAGATATTCGTTCGCTATTGTCGGAATCAATA
TGACACACATGGCGTACACTTTACTTCAAGATGGAAGTCTTAAATCTCAT
TTATGGAATGTCACTGAGGGACGCAATACCATCGATCATTTTCATCATTT
TTATTCATATTTGTTTATTGAGTTTGATAAGTTTTGGTTAAGTGAAAAAC
CAAAGGACATTATGGAATTTAATCGTATCAGGGATTTATTTGAAAATGAC
ATAAGGAATAAGTTACGTGACTCAAATATCCGTTTTAAAATTAATATTGT
TATTGATACAGTTTGA
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