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Associated RNAi Experiments
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| LSalAtl2s831 | supercontig | LSalAtl2s831:281816..286361 + |
Analyses
This mRNA is derived from or has results from the following analyses
| Analysis Name | Date Performed |
|---|
| ensembl | 2013-09-26 .965016 |
Properties
| Property Name | Value |
|---|
| Logic name | ensemblgenomes |
| Biotype | protein_coding |
| Evidence | IEA |
Cross References
External references for this mRNA
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of EMLSAP00000011843 >EMLSAP00000011843 ID=EMLSAP00000011843|Name=EMLSAP00000011843|organism=Lepeophtheirus salmonis|type=polypeptide|length=750bp
MTSIIKMCPLSGGRSEGPHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKK
VASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYD
VYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIP
AGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILIT
DAFNIGCHQLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMV
DQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRN
NPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPK
NSIILTSRSPANTLAYDLMTKGSGRTIELEIKKRVELTGTELEEYNKHRD
ELIVKKSLTSVLNGGDESSDDEMEISGKKHDIIMKNDPMNANDVPKGKTG
FFRSMKAKFPIFPTHEEKVIRWDDYGEIVRSEDWLDISQSTENSNVKQNN
EIKDDRSNIQSEVPTKCVTSKHSFHIKAQIQFIDFEGRSEGDSILKLLQQ
IKPRKVIVVRGTPEKCDTLKNFCEQIALKGDQQRIDVYSPENGEVLDVTT
ESFIYQVRLTESLVKSLEYSTGKDGSQLAWVDGVINLLTDDSADIIPDEE
DDAFEEPSLKKPRIPQLDSAPLDLQCNHQATFVNELKLSDFKAILTKNGI
SSEFQGGVLFCGDGFVALRRHDSGRITIEGSLCSEYYRVRELLYEQYAIV back to topmRNA from alignment at LSalAtl2s831:281816..286361+ Legend: exonpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >EMLSAT00000011843-707690 ID=EMLSAT00000011843-707690|Name=EMLSAT00000011843|organism=Lepeophtheirus salmonis|type=mRNA|length=4546bp|location=Sequence derived from alignment at LSalAtl2s831:281816..286361+ (Lepeophtheirus salmonis)
CTGCCATGACTTCCATCATCAAAATGTGCCCCTTAAGCGGGGGCCGCTCT
GAGGGACCTCATTGCTATCTCCTGGAAGTGGATGATTACAACTTCCTCCT
GGATGTGGGATGGGACCCATTCTTCAACTCCAAACTCAAAAAGGAGATCA
AGAAAGTCGCTTCCAAAATAGACGCCGTTCTTCTTTCCTACCCAGATCTA
GGCAATGCACTCTTAATTACGAATATATGCCGCTCTTATTAATAAACTAT
GTTTTCATCTCACAGATCATCTGGGAGCGCTGCCCTACGCCGTTGGTAAA
CTGGGACTCTCCTGCTCCATATTTGCAACTGTTCCCGTCCATAAAATGGG
TCAAATGTTCATGTATGACGTCTACGAGGCGCAACGGAAGCAAGAGGACT
TTGATCTCTTTACTCTGGATGAAGTGGACTCTGCTTTTGATAAAATAACG
CAGCTCAAGTATAATCAAACCTTTGCTCTTAAAGGTGATGATGATTTACT
TAAATCAAGCAATATACGGCCCAATATTTCATAGACGTATTTTCGAGTTA
ATTATTAGGATGAGTGGCTATAGTTTAGAGCATATATTTGATTTAAGGAC
GGATGTTGGCTCCTTTTAACCTTGAAATCTCTTTATATATCATTTTTTTT
ACTGTGACAATCCATTTTTACTACTTTAAATCCAATTTGCGGCCGTTTAT
AAAGGTTAATAAGAATAATTCTCAATTGATAGAAATTGAGGATTACGTCA
TAATTGAAGAAAACCCAGTTTTGAAGGCTCTATATTTTCCTATAAGTATT
GATCAAACATCATCAAATGGCTTTAAGGATTAAAAAAGACTTAGCAACTA
ATACTAATTGATGCCTATGATAAATAGTGATATTTGAATATAAGCAAAGT
ACATAATATGTACATAAAATCCCTATGAAATGTAAAAAATTGTACTTTTA
AAAAAAAATCAATTAGAGACGATAAAAGAAGGTTAATTAGAGAGAAATAC
CTTATTATTTCCATTTCTACTATATGGAAAAAGATTATATAATCTAATAA
TAATGTCGATAATTACTCGTCCAAGATTGCAAATGTAATCATTCTAGCAC
GCTTTTGTGTTGTTGACGGTCCACAATTCTTCTGATTTTAATTTTGTTCA
ACTTAATTTTTAGGTAAGGGAGAAGGGATTTCTATCACACCCATCCCTGC
TGGCCATATGATCGGTGGTACCATATGGAAGATCGTCAAAGACGGTGAAG
AAGATATTATCTATGCTGTGGACTTTAACCACAAAAAAGAGAGACATCTC
AATGGCTGTGACTTAGACAAACTACTTAGACCCTCAATACTCATAACGGA
TGCCTTTAATATCGGTTGTCATCAACTCCGACGACGAGTTCGTGATGAAA
AAATAATGACAAACATTTTACAAACTTTGCGGAACAACGGGAATGTTCTT
ATTTGTACAGATACGGCAGGAAGAGTCTTGGAGCTGGCTCATATGGTAGA
TCAATTGTGGCAAAATAGAGACTCTGGTTTATTAGCTTATTCCCTTGCAC
TCGTCAATAACTTCAGTTATAGTGTTGTCGAATTTGCAAAATCTCAGATC
GAATGGATGTCTGAGAAATTAATGAAGACCTTTGAGGGGAAGAGAAACAA
TCCCTTCCAATTCAAACACTTAAAGCTTTGTCATTCCATGAATGAGGTTA
ATAAAGTACCATCCCCGAAAGTAGTGCTTGCGAGCATGCCAGACATGGAG
TCGGGTTATTCTCGAGAACTATTTATACAGTGGTGCACAAATCCCAAGAA
CTCAATTATTCTTACATCCCGATCACCAGCAAATACGTTAGCCTATGATC
TTATGACCAAAGGAAGTGGACGGACCATAGAGTTAGAAATTAAAAAGCGT
GTCGAGTTAACGGGAACAGAGTTAGAGGAGTATAACAAGCATCGTGACGA
ACTCATTGTTAAAAAGTCATTAACTTCTGTGTTAAATGGTGGTGATGAGA
GTTCAGATGATGAAATGGAAATCTCCGGGAAAAAGCATGATATCATAATG
AAAAATGATCCAATGAATGCTAATGATGTCCCCAAAGGGAAAACAGGGTT
TTTTAGGTCTATGAAGGCTAAATTCCCTATTTTCCCTACTCAYGAAGAAA
AGGTAGTAATTAATTATCTCCTTGGTGATAATCTAACTGTAATTCCATTA
TTTTTTTATAGATTCGATGGGATGACTATGGTGAAATTGTGAGGTCTGAG
GATTGGTTAGATATTTCTCAAAGCACGGAAAATTCTAATGTTAAGCAAAA
TAATGAGATCAAAGATGATAGATCCAATATCCAAAGTGAGGTTCCCACTA
AATGTGTAACGTCAAAGCATTCCTTTCATATTAAAGCTCAAATTCAATTC
ATTGACTTTGAGGGACGATCTGAGGGAGATTCTATCTTGAAACTTTTGCA
ACAAGTAAGCCCTGTCATGAATGTATTATTACATATATATTTTAATATTT
TTAGATCAAACCTCGGAAAGTCATCGTTGTTCGTGGTACGCCGGAAAAGT
GTGACACTCTAAAAAACTTTTGTGAGCAAATTGCCTTAAAGGGTGACCAA
CAAAGAATCGATGTCTATTCACCTGAGAACGGGGAAGTTTTAGACGTCAC
GACAGAGTCCTTTATTTATCAAGTGCGTTTAACGGAGTCTCTCGTTAAAA
GCCTGGAATACAGTACTGGTAAAGATGGGAGTCAACTGGCCTGGGTGGAC
GGAGTTATTAACCTCTTAACAGATGATTCAGCAGATATCATTCCGGATGA
AGAGGATGATGCCTTCGAAGAGCCATCTCTTAAAAAACCTCGTATTCCAC
AATTAGACTCAGCTCCTTTGGATCTTCAATGTAATCATCAGGCAACGTTT
GTAAACGAACTTAAGCTATCAGACTTTAAGGCCATTTTAACCAAAAATGG
AATCTCATCAGAGTTTCAAGGAGGCGTTTTATTTTGTGGAGATGGTTTTG
TGGCGTTGAGACGACATGATTCTGGCAGAATAACAATTGAGGGTTCGTTA
TGTTCAGAATATTATCGTGTTCGAGAATTACTCTATGAGCAATATGCAAT
TGTTTGAGCGTGTATGAAAATATAAAGAGCGTTTTATTGTTTTTATTCAA
TGCAATTGGTCTTATTATTTAGAGCACGGATTTCATATCAATTATGTTTT
AGGGAATATTCTGAATCCGTTCTACGTGTTCGTTGAAGTAAATTTAATAT
ACAATGTGATACATATATCTAAAATTAATTATTCAAGTTGATACGATATT
TATCCTATAAAAAAGTAATTATTGGGGTTTTATTTTGACAATATTATACA
AATTAAATTAATCAAGGATTTCAATTTTAATGTTACTATTCACGTTGAGA
GATTTGAAATGTATAGTGTAGGTGTGTTGTATTCGGAGAGTAATTGTAAC
GTGCGGCCAAGGATGGGTGTGTACTTCTAATGGATACAATGTGAAGGGTT
TATTTTCAGTCTTTTGATAAAAAATCCTGTATTTTTCTATGAATTTGTCT
GTTGAAGGTGAGACTGACGTCATGGATAATTAGATTTGTCATAGGACTTG
TTCGTTTCCTGCTGATGAGCCATTCCTCAATGGCTGTTTTTTCATATACG
AAACCATCCGAGCAACTGACAGGATGGATCATAATTTCATGGGTGATGGG
ACAAATTAGATCGGAAGGGATTTCCGTTTCATCATTCACTAAAGAAGGTG
GGAAAACTTTGGAATAACTTGGAGCCGTGGGCTCTGAAAGAGGATTTGAT
ATTTTGTTTCTCCTCCATTGTATGGTTTGAAAAACGTTTTCTGCAGCAGA
GGGTTCGGAAAAAGTCTCTGGGAACTTGGATAATAAATCTTCTCTTGTTA
AGTGTGCTAATTGAGCTCCGTCAAGTCGTAAACTCTCAAAGGATTCTGAA
AATATATGACTGTTAAATCCCTTGATCTTGAGTGAGTTTATCCAAACAGA
AACATCTGAGATGGACCATTTTTTCATCTGAAATATGAACAATATTTATT
GAATCTATCAATTAGTTTATTTCATTTTTACATCTGTGTGGTGAAATGAT
TGGATATTCTCATCTACGAGAGAACCACTTAGTTTCCAAAGTGATATAAA
CTCATCATTTGAGCCAGTGGCCAGATACATATATTTAGATCCATCTAATT
CAAATAAGGGTTGACTAAAGGCACTGCAAGGAACATAACGACATTGCGTT
TCTAGTACACGTAGAACTTGAAAATCAAATCCATCCCATAGACGTACTGT
TTTGTCACCAGAAGTGGATACCATTAATTGTCGACTATCTCCCTTAAATA
AGAAAACAACAAATTAATAAGATAATATATCATTTGATCAAGTCATTGAG
CTTGAGATTACTTTTGAGAAAGAAACAGACATTATAACTCCTCCGTGTCC
ACTCAGACTCTTATGAGGCTGGATGTGAGCATTATCCACTTTCCAAATCT
TTATCAAGCAATCATTTCCCCCAGTAGCAAGATAGTACTCCTCGCA back to top
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