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Associated RNAi Experiments
InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR022712 | Beta-Casp domain | SMART | SM01027 | Beta-Casp | coord: 243..368 e-value: 4.2E-25 score: 99.4 |
IPR022712 | Beta-Casp domain | PFAM | PF10996 | Beta-Casp | coord: 243..367 e-value: 3.2E-23 score: 81.8 |
IPR011108 | RNA-metabolising metallo-beta-lactamase | PFAM | PF07521 | RMMBL | coord: 526..564 e-value: 1.3E-7 score: 31.2 |
IPR001279 | Beta-lactamase-like | PFAM | PF00753 | Lactamase_B | coord: 18..74 e-value: 5.9E-6 score: 25.9 |
IPR001279 | Beta-lactamase-like | GENE3D | 3.60.15.10 | | coord: 9..193 e-value: 6.2E-33 score: 113.5 |
IPR025069 | Cleavage and polyadenylation specificity factor 2, C-terminal | PFAM | PF13299 | CPSF100_C | coord: 607..747 e-value: 4.6E-29 score: 101.5 |
IPR027075 | Cleavage and polyadenylation specificity factor subunit 2 | PANTHER | PTHR11203:SF5 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KDA SUBUNIT | coord: 2..750 |
None | No IPR available | PANTHER | PTHR11203 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR | coord: 2..750 |
None | No IPR available | SUPERFAMILY | 56281 | Metallo-hydrolase/oxidoreductase | coord: 458..598 coord: 4..378 |
Analyses
This polypeptide is derived from or has results from the following analyses
Cross References
External references for this polypeptide
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >EMLSAP00000011843 ID=EMLSAP00000011843|Name=EMLSAP00000011843|organism=Lepeophtheirus salmonis|type=polypeptide|length=750bp MTSIIKMCPLSGGRSEGPHCYLLEVDDYNFLLDVGWDPFFNSKLKKEIKK VASKIDAVLLSYPDLDHLGALPYAVGKLGLSCSIFATVPVHKMGQMFMYD VYEAQRKQEDFDLFTLDEVDSAFDKITQLKYNQTFALKGKGEGISITPIP AGHMIGGTIWKIVKDGEEDIIYAVDFNHKKERHLNGCDLDKLLRPSILIT DAFNIGCHQLRRRVRDEKIMTNILQTLRNNGNVLICTDTAGRVLELAHMV DQLWQNRDSGLLAYSLALVNNFSYSVVEFAKSQIEWMSEKLMKTFEGKRN NPFQFKHLKLCHSMNEVNKVPSPKVVLASMPDMESGYSRELFIQWCTNPK NSIILTSRSPANTLAYDLMTKGSGRTIELEIKKRVELTGTELEEYNKHRD ELIVKKSLTSVLNGGDESSDDEMEISGKKHDIIMKNDPMNANDVPKGKTG FFRSMKAKFPIFPTHEEKVIRWDDYGEIVRSEDWLDISQSTENSNVKQNN EIKDDRSNIQSEVPTKCVTSKHSFHIKAQIQFIDFEGRSEGDSILKLLQQ IKPRKVIVVRGTPEKCDTLKNFCEQIALKGDQQRIDVYSPENGEVLDVTT ESFIYQVRLTESLVKSLEYSTGKDGSQLAWVDGVINLLTDDSADIIPDEE DDAFEEPSLKKPRIPQLDSAPLDLQCNHQATFVNELKLSDFKAILTKNGI SSEFQGGVLFCGDGFVALRRHDSGRITIEGSLCSEYYRVRELLYEQYAIV back to top
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