EMLSAT00000011889, EMLSAT00000011889-707736 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011889
Unique NameEMLSAT00000011889-707736
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s837supercontigLSalAtl2s837:5579..6436 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011889 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011889EMLSAG00000011889-694655Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053178EMLSAE00000053178-762106Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto768617auto768617Lepeophtheirus salmonispolypeptide
EMLSAP00000011889EMLSAP00000011889Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011889

>EMLSAP00000011889 ID=EMLSAP00000011889|Name=EMLSAP00000011889|organism=Lepeophtheirus salmonis|type=polypeptide|length=285bp
MVDPLLIEEMEMDDEMEEDPLSYVSVRLGNEDDEEDEEVQCEPDIKFQVS
KRGSKDLMYHCAQCSLQFPNKISLNLHLLRSHVNSRDSSRSESITSCPIC
DKVPCTDLTTHCRNEHSIDGVVCPICAKILSKTCTLNRHIEQVHLNMQIH
KPAKCDTCGKVFSKKGHLDRHIRTIHMGIKETSQPCPFCGKIFSTKSSLD
PHIDMVHKGVRKECPTCGKILSDLWKHMRTVHGYYRRKAKVPKEETIDSL
LSEDKAPKSVYCEEIPTKDETTHDDDNSTAYEDRT
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mRNA from alignment at LSalAtl2s837:5579..6436-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011889-707736 ID=EMLSAT00000011889-707736|Name=EMLSAT00000011889|organism=Lepeophtheirus salmonis|type=mRNA|length=858bp|location=Sequence derived from alignment at LSalAtl2s837:5579..6436- (Lepeophtheirus salmonis)
ATGGTTGATCCTTTACTTATCGAAGAAATGGAGATGGACGACGAAATGGA
AGAAGACCCCTTATCTTACGTGAGTGTTCGATTAGGCAATGAAGATGACG
AAGAAGATGAAGAAGTCCAGTGTGAGCCAGATATCAAATTTCAAGTGTCC
AAACGAGGCTCAAAGGATTTAATGTATCATTGTGCACAGTGTTCTTTACA
ATTCCCAAATAAAATTTCTCTGAATCTTCATTTACTACGTTCACATGTAA
ATTCTAGAGATAGTAGTAGAAGTGAGTCCATTACATCGTGTCCCATTTGT
GACAAGGTTCCGTGCACGGATTTGACGACACATTGTAGAAATGAGCATTC
CATAGATGGAGTTGTTTGTCCGATTTGTGCAAAAATTCTTTCAAAGACAT
GTACACTTAATCGTCACATAGAACAAGTTCATTTAAATATGCAAATCCAT
AAGCCGGCCAAATGTGACACATGTGGTAAGGTCTTTTCTAAAAAGGGACA
TCTTGACCGTCACATTCGAACTATTCATATGGGTATAAAGGAGACTTCAC
AGCCTTGTCCATTTTGTGGAAAAATATTTAGTACGAAATCCTCCTTAGAT
CCGCACATTGATATGGTGCACAAAGGAGTTCGAAAAGAATGCCCCACGTG
TGGTAAAATACTTTCTGATTTGTGGAAACATATGAGAACTGTGCATGGAT
ATTACCGAAGGAAAGCCAAAGTTCCCAAGGAAGAGACTATTGACTCCCTT
TTGTCCGAAGATAAGGCTCCTAAATCCGTTTACTGTGAAGAAATCCCAAC
TAAGGATGAGACAACACATGACGACGACAATAGTACTGCATATGAAGATA
GGACTTGA
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