EMLSAT00000011960, EMLSAT00000011960-707807 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000011960
Unique NameEMLSAT00000011960-707807
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s849supercontigLSalAtl2s849:170721..174764 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000011960 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000011960EMLSAG00000011960-694726Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053542EMLSAE00000053542-762470Lepeophtheirus salmonisexon
EMLSAE00000053543EMLSAE00000053543-762471Lepeophtheirus salmonisexon
EMLSAE00000053544EMLSAE00000053544-762472Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773790auto773790Lepeophtheirus salmonispolypeptide
EMLSAP00000011960EMLSAP00000011960Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000011960

>EMLSAP00000011960 ID=EMLSAP00000011960|Name=EMLSAP00000011960|organism=Lepeophtheirus salmonis|type=polypeptide|length=213bp
MQVSFTRAFQNTSSYLEQSFEPNRLLNESNSPQIHFTLKPLIPVQLDLQG
KQDEKLNISSLSSSSKEEIITSQESIISRSKLYRRHLKRHRTSFSHFQLC
ELEIAFESTHYPDVYFRELIADKLGLSEARVQVWFQNRRAKWRRGIKDYG
AIINEAVPFTTPMLTDCSSFASPSNTPSSPKETSFLLSSSSESPNDILKS
IIEDQIYNNDTTT
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mRNA from alignment at LSalAtl2s849:170721..174764-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000011960-707807 ID=EMLSAT00000011960-707807|Name=EMLSAT00000011960|organism=Lepeophtheirus salmonis|type=mRNA|length=4044bp|location=Sequence derived from alignment at LSalAtl2s849:170721..174764- (Lepeophtheirus salmonis)
ATGCAGGTCAGTTTTACACGGGCTTTTCAGAGTATTAATAGCACACATTT TAAGAATGTATTATATTTGAATAAGAACATTTAACAACATTGAAATATCT TTGCACTAACAATAGATACCTCTTCATATTTGGAGCAGTCCTTTGAACCA AATCGGCTCTTGAATGAGTCAAACTCACCCCAAATACATTTTACATTGAA ACCTTTAATCCCCGTACAATTGGATCTACAAGGAAAACAGGATGAAAAAT TAAACATATCATCACTAAGTTCAAGTTCCAAAGAAGAAATCATCACTAGC CAGGAATCGATAATAAGCCGCTCAAAGCTTTACCGTAGACACCTCAAGAG GCATCGAACATCATTTTCACATTTCCAGTTATGTGAATTGGAAATAGCAT TTGAATCTACTCACTATCCAGATGTATATTTCCGAGAGCTCATTGCTGAT AAATTGGGACTCTCAGAAGCCCGAGTTCAGGTAATTTATATGAAGAATCA ATCAAAATACTTTTACTTCTAAATTACTAAAAAAATTTCAATGCGTAACC ATTATTGGAAGTTGTTGTAAATAAACTAATTTTTATTTGACAAACCCGTT TATCTGGGTTCTAAACCAGGGAAATTAGTATAATATATTTCAACTTCTAT CGAAAACACATTTTTTGCCAAAGATTATTTATTCTATTTCTATATTAAAC AAGAATGGTTTAATTCCAAAAAACATATTTTCAAGATACCAATCAATATT TACTGTTTTTTTTTTTCAATTTTAACGTTTCACAGAATTGGATTGATCTT GAACTTTCTTAAAATATTGTTTTTGAAACTTTCCGACTGATACCGAAAAT CAAATACGAATAGGACAATTTTATAACAACTTTTTCATAATAATGTTTTG TTGCATATGATTTAGTTATCATATTTTGATCTAAGCAACTTCAATATGTA ACATAGAATACAAAATTTGATTAATATTTTAAACACAGGCCTGAATAATT CACTTATTCATAATTCTCTAGGAGGCATTCAGACGTCACAACTCAGCGTT CTGGATTTTTATTTTTAAGACAATTCTGACCAATTAAGGTACCTCCCTAT AAAGTTTACTCAAACCGTCAAAGTTCGGAATTATTAATCGAAATTTATTT TTAAATATATATAAATGAAAAATTAACGTTAATTTATAGCATTATATTCA GTTTTCATGATTTTTTTTACCTTTACTGTAATCTATAACTAATTTTGAAC CATAACCTCTAGTTTTTATGCTCTAAAATGAGGTTTTGCGTGCTAGAGCG TTTTGTTGAAAATTTGATGAAAATATAGGGTCGTGAAAAACGACAATTAT TTGATCACAGTATTACGTGGGCCCAATGCCGGTTTTACGTGGGATAGTGA GGCCACTTTCCCCAGGCTCCATTTTATTGGGCCCTTATGCTGGAATAGAA TTTCAAAATAATAAAATATAATTTTTTTATAAATAAAAATGAAAAAAAGA TTAGCAGTTCAAAAAAAATAGTTAGTTTTAAAATAGAAATAATATTATTT TCTAAAAAAAAAAAGTCAACATGGATATAAGTCCAAAGATGGCTTGGCCT TTTTTAACATATTTTACTTTATCAAGAAGTTAAAATATTTATAGAAATCT CAAATTTTAACAAAGGAAAGGAAGAAAAGGGTTCCGTTCATTAATTTTTG CCCTTAGCCTCGCTTACGCTAAAACCATGAAAAAAAGTAGAGCTACTCAC TTTTTGTCAAAAATGGCATATTAAGCTTACATTAATTTAACTCTCCATGT TTGACGAACACTTTTGCAAATATGAAATACCTTTTGTAAAACCGACGTAA AAATTTAGATTAATTAGTTAATATATTTTATTTGCCGATATCTCAAAGCA ATTTTATTGTACTTATTACACATTTGCTCCAGACACACAATTAGTAAGTT ATACACCAAATAGTTACCTTATTACTACAGGTTGTAAGAGCTTTGTGGTT TAACAAGGAGAATATGGACTAATTCCATATTTTGCAAAAATGTTTATTGA AAAGGTTATCTAACGATTAATCTATACAAAATATTGCTAAGCTACATAAT ATTTGATAACCCCTGCCACTGAATGATAGAAAGACACTCACATTGAACAT CAAATTTAAAATTATTAGTCTGCAATTACTCTATAAAAGCTTTTTACGTA TCATTTCAATGAATAATATAATTTTTACATTCACTCGTAAAAAGAATACC ATTGAAAGAGATGATGCATCATGCTGAAATTAAAAAATAATATAGCTTCA TGAATCAGTGTTTATTCATTTTGTAGATGTATATTGTTCCTAAATATATC CTTCACATAACATCAAGTTAAAATGATCATATTAGTATTGGTATCAATCC TAATTTAGGACTGAAGTCCTACATTGAGGACTTGCAATCTCAGAATCAAA GACTAGACTAGAACTCGACCCCTAATTTATACTGAGCTCAACAAAACCCT TATTNNNTCTCAGAATCAAAGACTAGACTAGAACTCGACCCCTAATTTAW ACTGAGCTCAACAAAACCCTTATTCTTAACAAACATATATTATAAATGTG GACTTGAGATGAGCTCAAAAGAAATCTGAGGACTCAATTTTATATATTCA AGAGCTCGATGAAAATATTCAAAGACTCGAATTGTAGTAATAACTTTTTC CCCACAGCTGCCAATCCCTCGATATTGATCATAATATCCCATCTTAATCA TATAAAAAACATTATAATGTAGCTAAATTATTCAATTGTATCGTTTTGTT ATACTGAAGACAAAACGTGATTTGATATCCATCACTACCAGACACGAAAT TATAATTTCCAACATTGGATTCATATTTTGATTTAAAAAAATAGATAATA TAAATCACAAGAAAAATTGCTACGTGTTCATTGATCAATTTATAAAATAA CATAAAATACTAGAATACATACTGTATATTTAATTTAGAATGTATAATAT CATTCGAAAATGGTGTATTTCTTAGCACTTATTATACAATCTGTATATTG AACAGTTAATATTACCTTAGTTTCAGGAAAATTGTTTTTATCCAAAGTGC ATCAAAAAATTGATTTAAACAATGCATTTGTGTAAATAGATGTACAATTA CATAGTTCATAAATATATTAAGTACATCAAATCACTTATTTTTTGCTTCA ATATGTTTGCATTTGATAAACATTTATTTAACCTCTCTCCTTATCAAATA CGTACATCATAAGTCTTAACTTGTCTTCGCCATTTCTCATCACCCCTGCG TACTTACAATGTACAAAGCCCCCAATGAAAGATTTTTCCTTTCCATCTTA CCAACAGTAACATGATAAGATTCCATGTTCGTGTCTATGCTATATAGATA TTATATGAGAGACCATTAATATAAACTGATATTAATACATAACTTTAAGT TGCTTTTATTTAAATATGATAAAGTTTGGGATACCCTTAAAGAAATGGGA TTGAAACTCAGTAACAAACTTAACCCACAATTTTTTGTATAAGGAAGGGT TCAAATTGATGGTAAATTTTACCGATTAATCCGAACTTATTACATTCTAA ACATTAAATTGTCAATTTGCATACAGATCTTAAATTTGGACTGAAACGAA ATTTTTTGAGATCTGCACAAAAAAGTAATAAAAAGGAACGTCGATTACAT AATATATGATACTTTATATGCTATGTGCCAACCTCTTCCTTCATAAAAAC AATAATTATGTGCATTAACAACATTACTGAATATTTTTACTCTTGAAGGT TTGGTTTCAAAATCGAAGAGCCAAATGGAGAAGAGGGATTAAGGATTATG GTGCTATTATTAATGAAGCCGTCCCTTTTACTACTCCAATGCTGACAGAT TGTTCATCCTTTGCCTCACCTTCAAACACACCTTCTTCTCCTAAAGAAAC GAGTTTCCTTCTTTCTTCATCCTCCGAGTCTCCTAATGATATATTGAAGT CTATTATAGAAGACCAAATTTATAATAATGATACCACTACGTAG
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