EMLSAT00000012046, EMLSAT00000012046-707893 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012046
Unique NameEMLSAT00000012046-707893
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s85supercontigLSalAtl2s85:1044389..1047769 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012046 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012046EMLSAG00000012046-694812Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053910EMLSAE00000053910-762838Lepeophtheirus salmonisexon
EMLSAE00000053911EMLSAE00000053911-762839Lepeophtheirus salmonisexon
EMLSAE00000053912EMLSAE00000053912-762840Lepeophtheirus salmonisexon
EMLSAE00000053913EMLSAE00000053913-762841Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780309auto780309Lepeophtheirus salmonispolypeptide
EMLSAP00000012046EMLSAP00000012046Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012046

>EMLSAP00000012046 ID=EMLSAP00000012046|Name=EMLSAP00000012046|organism=Lepeophtheirus salmonis|type=polypeptide|length=416bp
MYSEEVFGGLRRSLLFPGQTPYQAQYLSASGDDKPCAITFPGFPLNPXPG
PPPDPXAIFTNGKRDPNISVKLENERLWKEFHSIGTEMIITKMGRRMFPT
LKAQVSGLDPSSKYFVLLDLILADDCRYKFTGKEWVVAGKAEPQMPSRLF
VHPXSPASGAQWMKHDVSFQKVKLTNNNLDQNGHIILTSMHKYVARIHVV
QANDLLSLQFANSLYNSFVFPETTFLGVTAYQNDKITQLKIDNNPFAKGF
RENGQLRSKRKHCERPNGQNDEKRSRSEGEEEELNVTDVSPEDRLSHSPI
VSSGVQPSAVFPPHHQVLPSSFPHSPHFDIYYQHMLTSRYHQLLSQSYPF
YSPFLPPPIPSVLPPTSSPLTSSSSSPTSVKPKIVRPFESSPQKKSALYH
HHQMSLHVPPFLPTDK
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mRNA from alignment at LSalAtl2s85:1044389..1047769-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012046-707893 ID=EMLSAT00000012046-707893|Name=EMLSAT00000012046|organism=Lepeophtheirus salmonis|type=mRNA|length=3381bp|location=Sequence derived from alignment at LSalAtl2s85:1044389..1047769- (Lepeophtheirus salmonis)
ATGTATTCAGAAGAAGTGTTTGGAGGACTCCGAAGGAGCCTTCTCTTTCC
AGGACAGACTCCCTACCAAGCACAGTACTTGAGTGCCTCTGGGGATGATA
AGCCCTGTGCCATAACTTTTCCTGGTAGGATATTATTTTGATACTATTTG
TGATTTTGTGGATTAACTTATGTACGTAATGTTAGGCTTTCCTCTCAATC
CAMCCCCTGGMCCGCCCCCGGATCCAMCTGCCATATTCACAAATGGAAAA
CGAGATCCTAATATTTCTGTAAAGCTAGAAAATGAGAGACTCTGGAAGGA
ATTTCATTCTATTGGAACCGAAATGATCATCACGAAAATGGGGAGGTAAG
GAAATTCTCATTTATATTTTGTGACCCATTAGAGGCGCCAGGAGGGGAAA
AAATCAATATTTTTTCTTTCTTTTTATTTGAATAACATGTGGTTAATTAC
GTCAAGAAGGGTGGAAAGTAACTTAAAAAAAAGGAAAGAAAACCACAAAA
CGTCAAAAAGTCGTAAAATAAATTATTTGCCAAAAAGATTATGAGGAAAA
CTTGATATTATTTTAGTCAAAAAAATTGAAAAAGACCCTACTTTTTGTGG
TCATTATTCAACTAGGTCAAATCAATGTATTAATAATTAGGTCTTCACCG
TGTTTCCTTCTCTTGCTTAACTTTTTGTTAGATAGACATAACCAAAAAAA
GTCTACCTAATCAAAGATATTTCAACTATTTTTTTTAGAAGTATTTTTTT
TATGATTTATATCAGAAAAATGGAATTTAAATGGGGCCCATCATCACTTA
ACATACCTGCTGAGCAAATTCTTTCTGCCCAAATAATTTGACCCAATCAG
TAAAATGTACAAGCGGCTTGGCACAATGGCTGGAATGATACACCTATTTA
TAAGGAATACGCATATTTAAAAACACCGACAATGGTGATGCTAATGACTG
AGACAGGTTAGAGATTTCGAACGTCCAGACATCATAATATTTGTATGTGT
ATAAAAAGGGACTGGCGCCCCAAATTTTGTCCCCGTCTTGGCGGAGGKAG
AAAGGCAAATATTTTGGTCGAGCAGGAAATGAATTTGTATACATTAGTCA
ATGTATATTGTAAATTTATTTGGCTTCGAATACAAGTGTGAATTGACTTT
TTGACTTCTGTTGGGTGGTTATTTGACTCATTGTATTAGAGTCTATTACA
TTTCTTGCCTGTTAAGTTTAACCAGTATTTTTTTTTTTTTTTTACAAATA
ATATACAATCTTAAATTTTTCCATATGATAAATTATTTATGCATTCTATA
TCCATTTTTTGACCATGTAATGACGATTTTTTCTTCTTTTTTAATGAGTG
GAGTACAATTTACACAATTTTATGCAATGAAAGAGAGAATTAAATTAAAG
ATATTGAATAATGAATTGTGGAATTAAAAGAATCTCTTTTAAATTATTAT
TCTGACGACATAAAACATTAGTTTTACAAAAATAAATATTTTAATTCTAT
TGGCCATTCGACAGTCAAAATTTACTATGGATTCTAATAGTAGCACCAAA
TGAATAAATATTCTCCCCAATGTTATGACCAAGTTCACACACATACATAG
CCCTGAATGATTGTATTTTTTGTGTTTATAAGGTTGACTTTATTTTAAAA
TACAAAAAAGAGGATACTTATTTTTTTCAGTGTCGATTTTCAGGGGTTAA
TATGTTGAAATTGATGCATGTATCCCATTATGAATCAGTGAATACAAATG
GTATCTTGACATACATTTGGGACTTCCCGAATAAGCGAATAATTCTCTTA
TTGAATAATTTATTTATGAAACCAAATGTAATCAAATTCGTCATTCTAAA
CAAAAATATAAACTCATATTTTTTATATATGACCAAAAAAACAAAAAAAA
ATAAGTGAAGTTTTTGAATCAGAACATCATAATTTGACCAAGAGAGAGTT
GATTCTTATTTTTTTCTTTGTTGAGAAAATATATTATGGATTTTTATAGG
ACTAAAAAAACTGAATATTTAATGAATTTACAATAAAAGTTCACACTCGT
CTATACCATTTATTGATTATTAAGAACTTTAACTAGAGAGAGAGATTTGA
AAAGTAAACAAATATCCTTCATGAAGGTTCTGTCTCATCTTCCTACGCGA
CATTGATTTCCCCCCACTCCTGGCTCAATCAATGTGGGTGGAATTAAATA
TCAAACAAATTTGTTGTTTCTATTGCTATCGTTCCACCCAAAAAATATCT
TAATTAAAAAATAATTATTTCCTTCACTGATAAGATATTTTTTATACCTT
CCCATAAATTCATAATAATCATAATTTGTTCATTATTTTATAGACGAATG
TTTCCAACACTCAAGGCCCAAGTCTCTGGATTAGATCCGTCCTCAAAATA
CTTTGTTCTTCTTGACCTGATACTCGCAGATGACTGTCGCTATAAATTCA
CTGGAAAGGAGTGGGTTGTAGCAGGTAAGGCAGAACCACAAATGCCTTCA
CGCCTCTTTGTTCATCCGGMCTCCCCCGCCTCAGGAGCCCAGTGGATGAA
ACATGACGTCTCCTTTCAAAAAGTCAAACTGACCAATAACAACCTCGACC
AAAACGGACATGTAAGTGTGATTGAAAAAAAAAAGATACTATGCGTTAGA
CAAATTGATTTATTTGTATACTTTTTTTCCAGATCATATTAACATCCATG
CATAAATACGTTGCTCGGATCCACGTGGTTCAAGCCAATGATTTATTAAG
TCTTCAATTCGCAAATTCCCTCTACAACTCCTTCGTCTTTCCAGAAACCA
CATTCCTTGGAGTCACGGCGTATCAAAACGACAAAATCACACAACTCAAA
ATCGATAACAATCCCTTCGCAAAGGGCTTTCGAGAAAATGGACAGCTCAG
ATCCAAAAGAAAACATTGCGAGCGACCCAATGGACAAAATGACGAAAAAA
GGAGTCGATCCGAGGGAGAAGAAGAAGAGCTGAACGTCACGGATGTGAGT
CCTGAAGATCGTCTTTCGCATTCTCCAATTGTCTCAAGCGGGGTTCAACC
TTCCGCTGTTTTCCCACCTCATCATCAAGTCTTACCGTCATCCTTTCCGC
ATTCACCTCATTTTGATATATACTATCAGCATATGCTCACATCCCGCTAT
CATCAGCTCCTATCACAGTCATATCCCTTCTATTCCCCCTTTCTACCCCC
GCCTATTCCTTCTGTTCTCCCTCCAACCTCATCGCCACTGACATCCTCGT
CCTCGTCGCCAACTTCAGTCAAACCCAAGATTGTTAGACCTTTTGAGTCC
TCTCCCCAGAAAAAGTCAGCCTTATACCATCATCATCAGATGTCTCTACA
TGTACCTCCGTTTTTGCCCACAGACAAATAA
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