EMLSAT00000012048, EMLSAT00000012048-707895 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012048
Unique NameEMLSAT00000012048-707895
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s85supercontigLSalAtl2s85:1230541..1233730 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012048 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012048EMLSAG00000012048-694814Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000053918EMLSAE00000053918-762846Lepeophtheirus salmonisexon
EMLSAE00000053919EMLSAE00000053919-762847Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto780545auto780545Lepeophtheirus salmonispolypeptide
EMLSAP00000012048EMLSAP00000012048Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012048

>EMLSAP00000012048 ID=EMLSAP00000012048|Name=EMLSAP00000012048|organism=Lepeophtheirus salmonis|type=polypeptide|length=131bp
MLLTDNEMEVQCYPLANDPFTHTSFKIEHGDGQVSDFDTSISKTEVKFHQ
KGIPGEVLLEDRFYPHVEPFLAFRKVNLEDFPSSSSSYLQKSQPVKRRVN
IQPQKRIENENDEEEVKTSFESFEDSLTVPN
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mRNA from alignment at LSalAtl2s85:1230541..1233730-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012048-707895 ID=EMLSAT00000012048-707895|Name=EMLSAT00000012048|organism=Lepeophtheirus salmonis|type=mRNA|length=3190bp|location=Sequence derived from alignment at LSalAtl2s85:1230541..1233730- (Lepeophtheirus salmonis)
ATGTTATTGACTGATAATGAAATGGAAGGTCAGTTATTTGATAAGCCTAA
CATTATTCGTTTGCCAAAGAACGAATGAATACATTTTTATATGAAAGCGC
TTATATATGATTCATCATTGTATAAAAAATCAAGTTTTACAAGAATAGAA
ACCTTTGTTTTGATTAATTTAAACAAAATTGTGAACTATTGCCGAGTTTT
TGAATGTCAAAATGGTACTAACAAATAAAATTATTTAATTTTTTACTGTA
TATCAAAAATAATTATATTTCAGATCGTAATATGTATTAAAATAGTTATT
ACATCCTTGGAAGATCTTATTTTTTCTTAATAAACAGTTAAATTAACTAT
AACAATTGCAAGAATAAGATATTGACAATGCCGTTGCTTCCGGTTTATGA
TACAATTTGTGACGTCATTAAAATTTTTACATTTGAATACAAGAACAAAA
TTTTTTTTTTATGTAATATCTTGAGATATGAGTACCAGTTTTTAAATGCT
TGATTCTGACCCAAAATTTTCATAAATATACAACTTTTTTTAGTACTGGC
TGGKCAAAAGTTGGCGAAAGGGCGCCAAATCCACTACAAGTTAAAAAAAT
TCATAGTTATTTTTTTTTGTAGACTTAAGAGTTCCGTTCAGGAACAAACT
GAACTATACGTCAAGGTACTACTGAATAAAGAAATGGACCCCTTGATGTG
TTTAATTCTCTTTTTCTATTCGTAAAGGAGAAAACCATAATATATCTACA
TGCCTTATGTACTTTTAAAAAACAGGTTGACTCAAAAGAAATTAATTAAC
CGTAAAATATCCTTTGTTTACCGTAACATTGGTTATTAATCCNNNNNNNN
NTGGTTATTAATCCAGAAATAAATATTCTGATGATTTTTCTTTGATTTAT
GACTAGAATAAGTATATTATTATATCTTCAAGGACTTAACACGAACTGCA
TCAACCAGTAGGTGGGTAAAAAATACGGGTATACAAAAAAGGKTATAAAA
GAAGAAAATATCACCCTCAATCATCTAGTATTATCAAAGACCTAGGTGTG
TAAGAGGGAAACTACTTATATATCATATAAAAACTGTAGCAGAATGAAGT
CCTTGGTAAGTTATTTCAATAAAAAAATACTGGTTATTATTTTTTTATTC
ATTTTTATCTTACTATTAGTTGATAAATATTGATAAATTTCTCTGTAAGA
GAAATGAATTGAAACTTTCTTGTAATGATTATCTTCAGGAATCAGAGGAG
CTTTATTTATTTATTGTTACTCTGATTGTAGAAAATTTATTATAAAATTC
AATACACGAGTGTTTCAATTATATCTCCCATTTCACAATTAATATTCTCT
AAATAAAGGTGGAAATTGAATGGAAACAATTGTGTTATAAATATCACAAG
GAATTAAATTTATCAATTTTAATTCAAAGTTATTTTCATTTGTTTCGATG
TTCATTGCACAATCAGGGGCGTACGCAGGGGGCCGGTTGAATGGGCTGTA
GCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNTGCAATTTTTTTTACAAAAAGTTTAGCATTTG
AGTTTTTTTTTCCTATAAATTTAATTTTTTATAAATAGGTGGGGATTTTT
GTAATTGTTTTCCAAAAAATTTTGGATTTTTTGAATTTTTTTTTCAAAAA
GTTTAATTTTTGTAAAAAAATTATGGATTTTTTTGAATTTTTTTTAAGAA
TTTATTATATTWAATTTTTTTTCTTCAGAATTTTAATTGTCAGAAAATAT
TTATGAATTTCTTTTTTTTCCAAATAATTTAATTTTTTGTGAATAGCAAT
GGATTTTAAATATTTAATTTTTTGATTTTTTTTTTTTTCTAAAAATCATA
TAATCATGTGTACGGGCCTGACAATTGTTTTCATTCAGCTTTAGTATTTC
ACAACTATTCTAGAAATATAAATTTAAGAAAAAATAGCCTCTAGGCTGTT
AAAAAAAAGAAGGAGACAAAAAAGTATATTTAACCATATGATATATAGAA
TGTTGTTTGTGATATCTATTCCTTCATTTGTATTTTAGACCTTGGGATCA
TTGTTTTTAACTATATCTCTAGTTCAATGCTATCCCCTTGCCAACGATCC
CTTTACTCATACAAGTTTTAAAATTGAGCATGGAGATGGGCAAGTGAGTG
ATTTCGATACATCCATTTCAAAGACTGAGGTAAAATTCCATCAGAAGGGA
ATTCCTGGAGAAGTTTTACTCGAGGATCGATTTTATCCACATGTGGAACC
ATTTTTGGCGTTTAGAAAAGTTAACTTAGAAGATTTTCCATCAAGTTCTT
CTTCCTATCTTCAAAAGTCACAACCTGTTAAAAGAAGAGTTAACATTCAA
CCACAAAAACGGATAGAAAATGAAAATGATGAAGAGGAAGTGAAGACTAG
TTTTGAGTCATTTGAGGATTCATTGACTGTTCCAAATTGA
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