EMLSAT00000012144, EMLSAT00000012144-707991 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012144
Unique NameEMLSAT00000012144-707991
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s874supercontigLSalAtl2s874:242474..243763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012144 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012144EMLSAG00000012144-694910Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000054428EMLSAE00000054428-763356Lepeophtheirus salmonisexon
EMLSAE00000054429EMLSAE00000054429-763357Lepeophtheirus salmonisexon
EMLSAE00000054430EMLSAE00000054430-763358Lepeophtheirus salmonisexon
EMLSAE00000054431EMLSAE00000054431-763359Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto775169auto775169Lepeophtheirus salmonispolypeptide
polypeptide-auto775171auto775171Lepeophtheirus salmonispolypeptide
EMLSAP00000012144EMLSAP00000012144Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012144

>EMLSAP00000012144 ID=EMLSAP00000012144|Name=EMLSAP00000012144|organism=Lepeophtheirus salmonis|type=polypeptide|length=287bp
MIPQDDLYALLDITIDATVEVIRSAYRKKALKCHPDKNPDNPKAIETFHR
LSEALKILTDTEARKAYDNVIKAKQAALVRHKKLDAKRQKLKEDLERREK
EAEERVLVQKRQSDEEKLATEIERLREEGSKELQEEQELMKSQLFNLSDS
EPYNSTTPSSTDKIKLKWKKEDERYNKESLEKIFFKYGDIQNIIVLGKSA
LIEMKDSNAASIAAKIETGYMDNPLKIKIVSENDKKSTTPQVMPFETPQT
ASTLQSDNDYETLVMRKLRQAEERKKLIKEMIKNDEI
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mRNA from alignment at LSalAtl2s874:242474..243763-

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012144-707991 ID=EMLSAT00000012144-707991|Name=EMLSAT00000012144|organism=Lepeophtheirus salmonis|type=mRNA|length=1290bp|location=Sequence derived from alignment at LSalAtl2s874:242474..243763- (Lepeophtheirus salmonis)
ATGGGTCTAGTTTCCATCCTTCTCTTTAGTCAGCGGTGTTTATCTCGGTT
GTCGTAAGATATTTTTCGACGTTTTTTGGGTGTATGTAGTTCCTTTGTTT
CCTTTAGCTCTCAAAGCCGCAAAGTGTTGACACTTTATAGCAAAGAGGAT
TGCACACTCTGTGAAGAGGCCAAAGAAGATCTTCTGGCTTCAGGACTTGA
CGTCGAATTGAAAGAAGTAGACATCACTGAGCCAGGTTCTGAATTACTAT
TCCAAATTCATTTTATTTCTACTTACTCCAATATTTTATTTCTTATCTTA
TATTCTAGAGAATAGCAAGTGGTTCGGTCTCTATCGCTACGAAATCCCCG
TCTTTTACCTTGAAGATAAATTTCTCTCAAAGAACTTTTTAGATTTAAAG
GAATTAGAAAAGCGCCTGTCTCAATCATGATACCTCAAGATGATCTGTAT
GCTCTTCTCGATATCACCATTGATGCTACGGTAGAAGTTATTCGTAGTGC
TTATCGTAAAAAAGCTTTAAAATGCCATCCAGATAAAAACCCCGACAATC
CTAAGGCTATTGAAACCTTTCATCGCCTCTCAGAAGCTCTTAAGATACTA
ACAGATACTGAGGCACGAAAAGCCTACGATAATGTTATTAAAGCAAAACA
GGCCGCACTAGTACGACACAAAAAGCTAGATGCTAAGAGACAAAAACTCA
AAGAGGATTTGGAAAGAAGAGAAAAAGAGGCAGAAGAACGAGTTTTAGTT
CAAAAGAGGCAATCCGATGAAGAAAAACTGGCTACAGAAATTGAGCGTTT
GCGTGAAGAAGGATCCAAAGAACTTCAGGAGGAACAAGAACTTATGAAAT
CCCAATTGTTCAATCTGTCAGATTCAGAGCCATATAATTCTACTACACCT
TCTTCAACTGATAAAATAAAACTAAAGTGGAAGAAAGAAGATGAGCGCTA
CAATAAAGAGTCTTTAGAGAAAATATTTTTTAAATATGGCGACATTCAAA
ACATCATCGTATTAGGAAAATCAGCATTGATTGAGATGAAAGATTCAAAT
GCTGCTTCCATTGCCGCCAAAATTGAGACTGGATATATGGATAATCCTCT
AAAAATAAAAATTGTCTCAGAGAATGACAAGAAATCTACTACACCTCAAG
TCATGCCTTTTGAAACCCCTCAAACAGCTTCCACGCTGCAGAGTGATAAT
GACTATGAAACTTTAGTGATGAGAAAATTAAGACAAGCAGAAGAAAGAAA
GAAATTAATAAAAGAAATGATAAAAAACGATGAAATATAA
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