EMLSAT00000012281, EMLSAT00000012281-708128 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012281
Unique NameEMLSAT00000012281-708128
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s896supercontigLSalAtl2s896:99182..100974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012281 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012281EMLSAG00000012281-695047Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055133EMLSAE00000055133-764061Lepeophtheirus salmonisexon
EMLSAE00000055134EMLSAE00000055134-764062Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772091auto772091Lepeophtheirus salmonispolypeptide
EMLSAP00000012281EMLSAP00000012281Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012281

>EMLSAP00000012281 ID=EMLSAP00000012281|Name=EMLSAP00000012281|organism=Lepeophtheirus salmonis|type=polypeptide|length=61bp
VIVNEICARVRETLKRSNCSSHQKTCLLISINRTSTLQYNTYFWKKTQIK
LTGFGINQTCI
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mRNA from alignment at LSalAtl2s896:99182..100974+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012281-708128 ID=EMLSAT00000012281-708128|Name=EMLSAT00000012281|organism=Lepeophtheirus salmonis|type=mRNA|length=1793bp|location=Sequence derived from alignment at LSalAtl2s896:99182..100974+ (Lepeophtheirus salmonis)
GTTATTGTTAATGAGATTTGTGCAAGGGTTAGAGAGACGTGTGCACTTAG
GAATTCAGTTGCAGGGATCTATTAATAGTAACAGTAGTTATGGATAKACT
ATATATTAGTGTGGGCTTAAAGAAATCAATGTTTTACTTTGACGTGTTTC
AACCTTTCATTTAATTCCTTTTATTATAAAAAATCACTGCGCAAAATATT
TTTGACTGTAATACATATTTAATAGGGCTAGGAAGGTACTTTAACCCCAT
GGTTTGGTATAAACAGCGTTACAACATTCAGAGTACGTGGTTCAGTATGG
TAAAYTATGATTTTTACTATTAATGTAGTTTTTCGAAAAAAATCGATATT
ATTTTTTAATTATTTCTTTTCTGCCCCCCCCCCAAAAAAAAACCCTAAAT
GTATTTAACTTCTCTAAAACACAAAAGTTGATTTAAAAAATAAACGGGTT
ATATAATACTATTATTCAAGAATCTATATATATATTTATTAATTTTTTTT
GTCAATAAGATGAGCTTGTCTACAGGTTATAAACAAAAACCGATTAGAAG
TAACAATATCACCAGCTGGCTTTCCCTTGATACAAATGTATTTGTATTGT
TGAGGTATTGTGAGGCTAACTTGAAAAAATTGAGAAAATAGAATTTATAT
TTTCACATTTACAACCCGATTGACAGGTTAAGAGAATGAAAATAGTANNN
NNTTTAAGTACACAGTAAGAGCCACCCTTGTGTACAATATACAGAAAATG
AATAAATATCAGCTGTTCTTTAACAGACAACATCATTTTTATATTTAATA
TTTATTGATAGCGTTCTGTCTCTGTGTTTTTACTTATAGACTCCTAAACT
AATTATTGAGTTGAGGTTATTTTTGGCTTTAATATGATCCCCTCAACCAG
TTAACAGAACTATGTTACTTTTGTTCTACTGTAGGCGCTAGGCCATCCTA
TAAGCATCGATAAGTACTTTTTTTCAACTACTGTACTTTACAAAAAAAAG
TATCAAACTATTAAGGCCTTGTCTTAGATTAGAATTGCATAGCTTGAAAA
ATGAGGCAACTAACAACCTTTAAAATAAGTACTTTTTACTTGTCTTTTTG
GTTAAGGATGCATGGCAAAACAAAATTAAATGGAGGGTTCAATCATGAAA
CAAAAATTGTTAAGTCTACAGTTTTACATACTGCTTATATTTCTTGTCCA
GAGCTCCTAGGTATCTATAAAAACAACATTTTTCACAAAACTAATTCTTA
AAGTGAATCACAAGAATATTACTACAGGTTGTATTATGATTGAATTTGAG
GACTGGATTCCKCAAAATTTTACTCCCATTTTTTTTTTTTTTTATTGAGA
AAATCAAGAAAAGGTTGTCATCCATAACCAATTGTTAGTATTAGAAAAAT
ATATAGTAAATCTAAAAGGTAATGGATATTTGCATTTATTTTTATCTCGA
CAAAGTGATTACTAACCATTGTAAATTAACAACTGATAGATGTATTGAAT
CTAAATAACAGTTCATTCCAGAAAAGTAACTTATTTTAACTCGACAATAT
AGCTTGAAAAGGAGTAATTGCTCATCCCATCAGAAGACTTGCTTGCTAAT
TTCAATCAATAGAACATCCACACTGCAGTACAATACCTACTTTTGGAAGA
AGACTCAAATAAAATTAACTGGTTTTGGAATAAATCAAACATGTATATAA
ATGTAATAAAACTGAAAATGAAAAATATGGAAATAATTGCTTTGTAAATG
AACTTCTAATTTATAAACAACTCAAATTACGTTAGTAAAAAAT
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