EMLSAT00000012370, EMLSAT00000012370-708217 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012370
Unique Name	EMLSAT00000012370-708217
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s905	supercontig	LSalAtl2s905:198215..201197 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012370 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012370	EMLSAG00000012370-695136	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000055503	EMLSAE00000055503-764431	Lepeophtheirus salmonis	exon
EMLSAE00000055504	EMLSAE00000055504-764432	Lepeophtheirus salmonis	exon
EMLSAE00000055505	EMLSAE00000055505-764433	Lepeophtheirus salmonis	exon
EMLSAE00000055506	EMLSAE00000055506-764434	Lepeophtheirus salmonis	exon
EMLSAE00000055507	EMLSAE00000055507-764435	Lepeophtheirus salmonis	exon
EMLSAE00000055508	EMLSAE00000055508-764436	Lepeophtheirus salmonis	exon
EMLSAE00000055509	EMLSAE00000055509-764437	Lepeophtheirus salmonis	exon
EMLSAE00000055510	EMLSAE00000055510-764438	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto774353	auto774353	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012370	EMLSAP00000012370	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s905:198215..201197-

protein sequence of EMLSAP00000012370

>EMLSAP00000012370 ID=EMLSAP00000012370|Name=EMLSAP00000012370|organism=Lepeophtheirus salmonis|type=polypeptide|length=365bp
MNNSKSGTCHEVAVKMLKEGHTDSDVIDLVKEVEIMKKVGSHENVLSLVG
VCTKPNGSHPLWAVVEYALHGCLKTHLQKRKNERLLLSSEEMYSFSNQIS
KGMNFLSKRKCVHRDLAARNILLADKNVIKIADFGMARDVNGKEYYRKRS
GGKLPIKWMAPEAFFQNFYSTQSDVWSYGILLWEIANYGEQPYREIFDHI
TLFKKLDEGYRLSKPSDCPQIFYDLMKYCWKYHPEERPNWENLITLTDSL
LAGTLDYRYLTLSSENGDDVTTPILMGGERYANCIPSILTCDIKTSSRPP
SYVSGYCDIELYTQNRIHPFKTGYSNNVYGKLLNDHISSCSSISSISSSA
ASSSNEEHPDEEPSK

mRNA from alignment at LSalAtl2s905:198215..201197-

Legend: exonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012370-708217 ID=EMLSAT00000012370-708217|Name=EMLSAT00000012370|organism=Lepeophtheirus salmonis|type=mRNA|length=2983bp|location=Sequence derived from alignment at LSalAtl2s905:198215..201197- (Lepeophtheirus salmonis)
GATATATTCATATTGTTATTTAAAATAATGCTAGTAGTGATTTCGTGTAT
ACTCGTGTTTCTCTTACATCCCACATTTGGAGAATCAGGACTTCTTCGAT
GGAAGCTTGAATATCGTGGAAATAATACCCATGAACCCCTGGCAGTACCA
TCCTCAAGACGTATTGAAATGGACTGCCGAATAATTCACCGAAAAAATTT
ATCTGAAAGGACTGATTGGATTAAAAACGGGGATCCATTGCCAAAATATT
CTCATATCCGTATACGAAAAGGGAAGCTTGTTATTCGGGACAGTAAGGTG
GATGATAGTGGGAACTACACGTGTATAGTTTCTGATGGGCAAAATGTCCT
TATTCATCATTATGTGGTATGTTAATTGTTCAAACTTAATATGCGTCGTT
TTAAAATCAATTAATTTCCGTACTTTTTATTCATTATAGGTCAAAGTCGT
TCATCGCGTAGTTGCACATCGACCTATCGTAAAGGATAGTTTACCAGGGA
ATCATACCGTTCTGTTAGGGTCGAATCTGACTCTCTCATGTGATGTAGAA
TATGATAATATACTGAGCTCAATGACTATGGCATGGGTCAAGCATCTTTA
TATTAATGGTTCATATAAGAACCAGCAAGATGGGTCCGCTAATCTACGGC
TTCTCCAAAACTGCACGCTTGCAGACACTTTCTGTGATTTTTGTTGAGTA
ATCCGAATACTACAACTGCCAGGGTAAATATTTACATTATACTTTTAAAT
CTTAACCTAAAATGGTAACATTTTTATTTAAAAAAATGTTAGAAATTACA
TCTAACGAATCTTCAGTTCAATGATACTGGACCCTATTCTTGTATAGCAA
CCGATAAATATGGATTTGATGTTAGTACAGGCATGATAACAGTTGTGGAA
GAGCTTCCAGAGGTCCTTCATCTTAAGCATGTTCGTTTTATGTGGAAAAT
TATAATTTCAGCATCAATTCTTTTCACATTCATTTTGATTGTTACTTGTG
CTCTTTTTTGGTAGGTAATATTATTATTACGGAAGGMTGACTAATTTATT
AGTATTAACTAATATATATTTTTATCCTTTACATAGAGCTGAATCTGCGA
GACGTAAGAAAAAGAACACGATATCTGTTTTTGGATATACTAAACAAATC
AAAGTTAACCATATCAACACTACTTCCCCTGAGAACTCAATCGCACCTGA
TGTGACGCTAAAAAAGATAAGGTAACAAAGGAGTTGGGGGGGGGATGATT
GTAAATTAATGAATACTTTGTCAATATTGATCTTTGTACTGAATGGTGAT
AGAAAATCGTCTTCAAATCCTATAAATACAATGTTATTTTTCATACTAGG
TCTCAACCCAAAGTAGATTCAACGACTGGTGTTCCCTTTACGAGCGAGTA
TGAGTTTGATGTCGATGAAGCATGGGAATTACCAATTGAGCAACTCACCC
TAGGAGGTATATTAGGGGAGGGAAACTTTGGGAAAGTATTTAAAGCGAAT
ATGAATAATTCTAAGAGTGGAACTTGCCATGAAGTAGCTGTTAAGATGCT
GAAAGAAGGTCATACCGACTCTGACGTTATAGATTTAGTTAAAGAAGTTG
AAATTATGAAAAAGGTTGGCTCGCATGAAAATGTTCTTTCACTGGTTGGG
GTTTGTACTAAGCCTAACGGATCACATCCTCTTTGGGCTGTGGTGGAATA
TGCCCTGCATGGATGTCTTAAAACTCATCTTCAAAAGCGAAAAAATGAGA
GGTTATTGCTTAGCTCTGAGGAAATGTACTCTTTTTCTAATCAGATTTCC
AAAGGAATGAACTTTTTGTCGAAAAGGAAGTGTGTTCATCGAGATCTAGC
CGCCAGAAATATCCTTTTGGCAGATAAGAACGTCATCAAAATTGCAGACT
TCGGCATGGCAAGGTTCGTATAAAATATTCTATATACATTCTTACATAAC
TAACTCTAGTGTTTTTTTTTATATAGAGATGTTAACGGAAAGGAATATTA
TCGTAAGAGAAGCGGTGGMAAATTACCCATTAAATGGATGGCCCCAGAGG
CATTCTTTCAAAACTTTTATTCAACGCAATCAGATGTATGGTCTTATGGC
ATACTTTTGTGGGAAATTGCCAACTACGGAGAACAACCTTATAGGGAAAT
TTTCGATCATATCACTTTATTCAAAAAGCTTGATGAAGGCTACCGCTTAT
CTAAGCCATCCGATTGTCCGCAGATTTTTTATGACCTGATGAAATATTGC
TGGAAATATCACCCAGAAGAACGACCCAATTGGGAAAACCTGATTACTCT
CACCGATAGTTTACTCGCAGGTAGTTAAAATTGCGTAATTAATTTCGCTA
TGTAAAATTAATTATATAAATCTCTTTGGGGTTTTCAGGCACGCTTGATT
ATCGATACTTGACCTTATCTTCTGAAAATGGAGATGATGTCACTACACCT
ATTCTTATGGGTGGTGAACGCTATGCAAATTGCATTCCTTCTATTCTCAC
ATGTGATATAAAGACTAGTAGTCGACCTCCGTCATATGTTTCAGGATACT
GTGATATTGAACTGTATACTCAAAATCGGATACATCCATTCAAAACTGGC
TATAGTAATAATGTCTATGGAAAACTTTTAAACGAGTAAGATCTACACTC
AAGATTATATTAACCGATTTTGACCTAACAGACAGCGATCCTCTTTAGCT
TTCTTTCTTCAATATAAGACAGAGTTTTATTTTATTAATTATATCATTAC
GCTTAAATAATTAGATATTTGATTAAATTTGCATTTAAATTATGAAAGGA
AACAAATGATGAGGTTTTATATTATGAATATTATAAATAATTTGAGGATT
TATTGTAAAGGGGTTCTAATCGGTTAATTCATTGAATAGTCATATCAGCA
GCTGTAGTTCAATCTCGTCAATATCTTCCTCGGCAGCCTCTTCCTCAAAT
GAGGAGCATCCGGATGAAGAACCCTCTAAGTGA

Add to Basket

Search form