EMLSAT00000012442, EMLSAT00000012442-708289 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012442
Unique NameEMLSAT00000012442-708289
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s914supercontigLSalAtl2s914:161702..164343 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012442 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012442EMLSAG00000012442-695208Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055848EMLSAE00000055848-764776Lepeophtheirus salmonisexon
EMLSAE00000055849EMLSAE00000055849-764777Lepeophtheirus salmonisexon
EMLSAE00000055850EMLSAE00000055850-764778Lepeophtheirus salmonisexon
EMLSAE00000055851EMLSAE00000055851-764779Lepeophtheirus salmonisexon
EMLSAE00000055852EMLSAE00000055852-764780Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto773593auto773593Lepeophtheirus salmonispolypeptide
EMLSAP00000012442EMLSAP00000012442Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012442

>EMLSAP00000012442 ID=EMLSAP00000012442|Name=EMLSAP00000012442|organism=Lepeophtheirus salmonis|type=polypeptide|length=527bp
QLDFGSIFGRPQPQQPNTPTRLNLGQIFQGFQPQPNQQQGPPNGFGGLLG
ALGGIAGQTEIQVNPDGTFNIGPQTPRPFQPATTISTFPPTXSTTTTTTF
VPIDPGIIVEPFPSGPNQSNEPCMERRTDYFGTELVNGRQNRVRNLDQCK
TMCQENPQCQYWTFGTRRSRNRRDRRACWLRSNKFGSEPHSSRVSGKKFC
DNEIISISTTTTTTTRPIISSGCSTVGGADIGSACQLPFEXKNRIYNGCI
LVDAGDNIPWCSTLTQNGVHVGGRGKWGHSCGTNAKRYSTRIVGGRPADP
NEWPWLAAMIRPSEVSSGQFCGATLISDRHVITAAHCVAPFKQDQIKVRL
GEYNFNAEGETLDRTYNLESIKMHELYDAVKYYNDIAIMKLDRPVTFSKS
IYPICLPPPIETYEKRRGYVIGWGTIYFGGPTSNILQEVNVAVWDNNKCK
ENYSALNRNVTSKMLCAGDRGRDACQGDSGGPLNCLNAFSQWELCGVVSW
GARCAEPDYPGVYTRVTEYLDWIEQNK
back to top

mRNA from alignment at LSalAtl2s914:161702..164343-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012442-708289 ID=EMLSAT00000012442-708289|Name=EMLSAT00000012442|organism=Lepeophtheirus salmonis|type=mRNA|length=2642bp|location=Sequence derived from alignment at LSalAtl2s914:161702..164343- (Lepeophtheirus salmonis)
CAACTGGATTTTGGTAGTATATTTGGTCGACCTCAGCCTCAGCAACCAAA
TACGCCAACACGCCTAAACCTTGGTCAAATATTCCAAGGCTTTCAACCTC
AACCCAATCAGCAGCAAGGGCCCCCTAATGGATTTGGTGGACTTCTTGGG
GCCCTAGGAGGTATTGCCGGTCAAACAGAGATTCAAGTTAATCCTGATGG
AACGTTCAACATTGGTCCACAAACTCCAAGACCCTTTCAACCTGCTACAA
CAATAAGTACATTCCCTCCCACGKCCTCCACAACTACTACAACGACGTTT
GTCCCTATCGATCCTGGAATTATTGTAGAGCCTTTTCCATCAGGTAAATA
TAATCATCATTGCCAAAATTGGTAACACATTAAGGGTCAAACGATATGGA
TTTTTTGGGTAAAAATATAGATTAATCAGTCAAATTTTTTTCTTCGAATT
AATCTTTGAGATTTTAATAAATATAATCGTAGAAAAGCACAACTTTAGTC
ATTTCCGCTGCTATCTATTTTGCCGTATCACCTAGCAAAAAGACTATCTG
CTAAGATCTACAGAAATAATTCGCTTGTATTTTTCTTTTGAATTTTTAAG
GTTTGGATTCAGTATCAGTATTTTCATAGCCAGTGTCCTGAGATAAGATT
TTATGTAATTTTTTTATGACGGTAAAAAGTGATGTTACGTCTTAAATATC
ATTAATTTTCCTGTCAAAATATTGTTTACAGGTAAACGGGAAATTTAAAA
AACGGCTGCATAGGCCATGTTTAGTATTTCAATGGTTTATCAATTATAAT
TTTTTGATATATATGTTGATTTTTTTTATTTTAAAGAATTTGATTTTAAT
TGCAAGGAGAATAAAATACCGTTAATGATCGGCGAGTTCTACCAACTACA
GATTTATATATAATTATCAAAAACAGATAATTCAATAGGCTCACCTAAAC
ATCGTTTGTGTCTAAATACATACAAGTTGTCTTTTATTTAAAAAATCATT
TGTTATAGGACCAAATCAAAGTAATGAACCTTGTATGGAGCGGCGAACAG
ATTACTTCGGAACAGAACTGGTGAATGGAAGGCAAAATCGAGTAAGATAA
ACAATTATTTCATACAAGCACCAGGGAATATTGTGTTTTTTAATCCTTGC
TTAGGTTCGTAACCTAGATCAATGCAAAACAATGTGCCAAGAGAATCCTC
AATGTCAATATTGGACATTTGGAACTCGTAGATCTCGTAATCGTAGAGAT
CGTCGAGCATGTTGGTTAAGAAGCAATAAATTTGGATCTGAACCTCATTC
TTCAAGGGTGTCTGGAAAGAAGTTCTGTGATAACGAAATCATTTCCATTT
CAACAACAACGACGACGACTACTCGGCCCATCATATCCTCCGGCTGTAGT
ACAGTCGGAGGTGCTGATATTGGCTCAGCATGCCAATTACCGTTCGAGMA
TAAAAACCGTATTTACAATGGGTGTATATTAGTTGATGCTGGTGACAACA
TACCCTGGTGCTCAACTCTGACTCAAAACGGAGTTCATGTGGGTGGACGA
GGAAAATGGGGACATTGTAATGGAAATACTTGTCTCAATGATTTCAGTAA
GAAATACCATTTGTTCATCGTTTAATATTTAATAATGCATAATTTTTTAA
CTATTATTACTAGATGGAGCTCCTGCAGGGCCTCAGATAGTTACAACCAC
GACGKCGACGACAACGKCCACAKCCACCACAACAACTACCACCACGACAA
GGAAACCAACCACAGGACCAAGTAATAATAGATTAACTATTTTCATTAGG
AAATACTTATAAAACTATTTTCCTCTAGCTTGTGGCACAAATGCCAAAAG
ATACAGTACTCGTATCGTTGGAGGACGTCCAGCAGATCCTAATGAGTGGC
CATGGCTTGCAGCAATGATTCGTCCAAGTGAAGTATCTTCTGGACAGTTT
TGTGGAGCTACTTTAATATCTGATAGACACGTGATCACTGCAGCTCATTG
CGTTGCACCGTAAGAACAACATTTTAAAGGACAAAAGTCCATATAATTTA
TCTTACAAAATACTTATACTTATGTAGGTTTAAACAAGATCAAATCAAGG
TCCGATTGGGAGAGTATAATTTCAATGCGGAAGGAGAAACTTTAGACCGA
ACATATAATTTGGAGAGTATTAAAATGCATGAGTTATATGATGCTGTCAA
ATACTATAATGACATTGCTATCATGAAACTGGACCGTCCAGTTACATTCA
GCAAATCTATATACCCCATTTGTCTTCCCCCACCCATAGAAACATATGAA
AAACGACGAGGCTATGTCATTGGATGGGGTACGATATACTTTGGAGGTCC
AACCTCCAATATTCTGCAAGAAGTCAATGTTGCAGTATGGGATAATAACA
AATGCAAAGAAAACTATTCGGCCCTAAATCGCAACGTGACTTCTAAAATG
TTGTGTGCCGGTGACCGAGGAAGGGATGCATGCCAAGGAGACTCTGGTGG
TCCACTTAATTGCTTAAATGCCTTTAGTCAATGGGAGTTATGCGGAGTTG
TATCATGGGGAGCTCGTTGTGCTGAGCCAGATTATCCTGGAGTTTATACA
AGAGTCACAGAGTATCTGGACTGGATTGAACAAAATAAATAA
back to top
Add to Basket