EMLSAT00000012445, EMLSAT00000012445-708292 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012445
Unique NameEMLSAT00000012445-708292
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s914supercontigLSalAtl2s914:210725..213780 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012445 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012445EMLSAG00000012445-695211Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055861EMLSAE00000055861-764789Lepeophtheirus salmonisexon
EMLSAE00000055862EMLSAE00000055862-764790Lepeophtheirus salmonisexon
EMLSAE00000055863EMLSAE00000055863-764791Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto774587auto774587Lepeophtheirus salmonispolypeptide
EMLSAP00000012445EMLSAP00000012445Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012445

>EMLSAP00000012445 ID=EMLSAP00000012445|Name=EMLSAP00000012445|organism=Lepeophtheirus salmonis|type=polypeptide|length=773bp
VGNQKQASQLLDSRTRTLHPSFHSTTEGANIFSSTMKPSQDSKGSTYPIE
RLHNLEKLINKPDSLIPVGPESDLAVLLEASISLVKKQLDLESPDCLRFY
ELALPKSFFKLMNLEIDSSGDDATNIEKYVQEKCVTLMVLLVLKWRNPLD
QEEEETFASNDVLSLLLDPHCIFHTTNAKKQPQSRSIFTNDEFRSNGILL
DFIEGFGSLGGFDVLYDRLYHPAKSGICLINAIIKPFGLCAEFLSQDILQ
RYFLPLLQQIPTYLESLCEEEMQEEMDDNYILSIIQEINRRLEMFRLQVH
LRTLVMSSPKKDTKELLQIIGFISNGRISPQKVQNLLEMEDKSNFHQDNC
ISSCSKRISQLIFEEYLDQPNSFDKLSQMISFKKNERSFSSQDIDDIWSA
QFGQHESIIHLLLIQIVVNLSDTQIDYLFDKFKYSILEMKDDLRVQSLLE
LMGKIVEVDTEDVMRMKVLSLYWNLCHHEDISLANMSQIITAHVKILDGS
SNLEARKNHWLQVCIEEFSSKRRRRGFIPSLRLIREICSYYPEPSNIVVQ
SSEPIPVDVAQRYNITDEFQGCHMILTNVVHSLIYLSQYNVDQGDLSCYN
IEVREHLEFIGFILKHGSLWLLEAPAKRIWKSLIEESHLEEVRDACFEWF
LYLMNNEPDINPEHVKSFFDNCIIQMDPKLLTMSGMECFNIFFRSVNLKE
NKLSRDCFLTKDLNLIGIDYIWKIIRTCPNKKIVHRAIDILKEKYTQLDP
SLRDEDENIENTILSSFFDKLYM
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mRNA from alignment at LSalAtl2s914:210725..213780+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012445-708292 ID=EMLSAT00000012445-708292|Name=EMLSAT00000012445|organism=Lepeophtheirus salmonis|type=mRNA|length=3056bp|location=Sequence derived from alignment at LSalAtl2s914:210725..213780+ (Lepeophtheirus salmonis)
GTAGGTAACCAAAAGCAGGCTTCACAGCTTTTAGATTCGTAAATTTTTGC
ATTCGAACTTCGGATTTTTTTTTAAGGAAAATAATGTTTTAATCTTTTAT
CGATTAGGATTCATAATATATTTTGACACTCCAATACGAATACTTTAAAA
TAATTTGGACTATATTTTTGCTATTATTTTTCAGAAAAAGATATTTTAAA
TCTTATTTTTCTTTAGAAAATAAATTTTACGTTTTTCTTTTTAAATTATT
ATTTGTCGCCTCTTTTGTGACCCTATAAAATTCATAACAGGCGGACAAGG
ACCCTACACCCCTCTTTTCACTCCACTACTGAAGGAGCCAATATTTTTTC
AAGCACAATGAAACCATCTCAGGATAGCAAAGGATCCACATATCCCATAG
AAAGACTCCACAACTTGGAAAAATTGATCAATAAGCCGGATTCTCTCATT
CCTGTAGGTCCAGAATCAGACCTAGCTGTTCTTTTAGAAGCATCTATTTC
TTTAGTAAAGAAGCAACTGGATTTAGAATCCCCAGACTGTCTCCGTTTTT
ACGAACTGGCTCTACCAAAGTCATTTTTCAAGTTAATGAATCTTGAAATT
GATTCATCAGGGGACGATGCAACTAACATAGAAAAGTACGTCCAAGAAAA
ATGTGTTACTCTGATGGTGCTGCTGGTTCTTAAATGGAGAAATCCCTTAG
ACCAAGAAGAAGAGGAGACTTTTGCCTCAAATGACGTCCTTTCCCTGCTT
TTAGATCCACATTGTATTTTTCATACTACCAACGCCAAAAAGCAACCTCA
GAGCAGATCCATTTTCACAAACGATGAATTTCGAAGCAATGGAATACTGT
TGGACTTTATTGAAGGATTTGGTTCTCTGGGTGGGTTCGATGTTCTCTAT
GATAGATTATATCACCCAGCAAAATCCGGAATATGTCTAATAAATGCTAT
TATTAAACCTTTTGGGTTATGTGCGGAGTTCCTCTCTCAAGACATTCTTC
AACGTTATTTCTTACCTCTTCTGCAACAAATTCCTACATATTTGGAATCT
TTGTGTGAGGAAGAGATGCAAGAAGAAATGGATGATAATTACATTCTTTC
TATCATTCAAGGTTATATATTTTATATTGTATTTTCATTTTTCAAAACAG
TTTCTTGGTGACCCCTGGTCATTCACGATAATATGTATTTGTCATCTTAA
TGATATCATAAAGTTATTTTGAATTAAGTGCGCTTACGATTAGTTTTTCA
GTTTGAATATATCATTTCGACATATTCCTTGAAAATCATAGTCGACATTG
TCTTTTCGTTGGAGAATACGTCAAGTTCATCCTTACTGGATTAGTATACT
AATTCAGATATAGATAGAAGTTGGTATGGTCACCTTATTTGACGGAGTAC
CATGTTTTTGGTCCTTATGTCTTTCCCGTTTTGGAAAAAGGTCTCACGAT
ACAATAAAGATCATGAGGTTTTTTAAATATTCGATTATTTTTTTAAATTA
TATTTACGTTTACAATATTGCAATTCCCGTCTTTTTTTCTATTTACAGCT
CTTAAATCCCTCTCAAAGGCCACACTTAATCTACTAGAAGATAAAGAAAT
AAATCGTAGGTTGGAAATGTTTCGTCTCCAAGTTCACCTTAGAACATTAG
TCATGTCTTCTCCTAAAAAAGATACTAAAGAACTTCTGCAGATCATAGGA
TTCATATCAAATGGACGTATAAGTCCCCAAAAAGTGCAAAATTTACTAGA
AATGGAAGATAAATCTAATTTTCATCAAGATAATTGTATTTCTTCTTGTA
GTAAAAGAATATCCCAATTGATTTTTGAAGAATATTTGGATCAGCCTAAC
TCTTTCGACAAACTAAGCCAAATGATTTCATTTAAAAAAAATGAAAGATC
TTTTTCTTCACAGGATATAGATGATATATGGAGTGCTCAATTTGGTCAAC
ATGAGTCCATTATACACTTGCTATTGATTCAAATAGTTGTGAATTTGTCT
GATACCCAAATTGATTATCTCTTTGATAAATTCAAATATTCTATTCTTGA
AATGAAAGATGATCTTAGAGTTCAAAGTTTACTTGAATTAATGGGGAAAA
TTGTGGAAGTTGATACTGAAGACGTCATGAGAATGAAGGTTTTGAGCTTA
TATTGGAATTTATGTCACCATGAGGATATTTCCTTGGCTAATATGAGTCA
AATAATTACTGCTCATGTAAAAATCCTTGATGGTTCATCCAATCTGGAAG
CTAGAAAAAACCATTGGCTGCAAGTGTGTATTGAAGAATTCAGCTCAAAA
AGAAGAAGAAGAGGATTCATTCCTTCTCTGAGGCTTATTCGAGAAATTTG
TTCATACTATCCAGAGCCATCAAATATTGTTGTTCAAAGCTCAGAGCCTA
TTCCAGTCGATGTAGCTCAACGATATAATATCACTGATGAATTTCAGGGA
TGCCATATGATTCTTACCAATGTAGTACACAGTTTGATATATCTTTCTCA
ATATAATGTTGATCAGGGTGATTTATCTTGTTACAACATTGAGGTGCGAG
AACATTTGGAGTTTATCGGTTTTATACTCAAGCATGGATCCTTGTGGCTT
TTGGAAGCTCCTGCTAAAAGGATTTGGAAATCTTTAATTGAAGAATCACA
TTTGGAAGAAGTTCGAGATGCATGTTTTGAATGGTTTCTCTACTTGATGA
ACAATGAACCTGATATTAATCCAGAACATGTCAAGAGCTTTTTTGATAAC
TGCATTATTCAGATGGATCCAAAGCTACTCACAATGTCTGGGATGGAGTG
CTTTAATATATTCTTTCGATCAGTTAATCTTAAAGAGAACAAATTGTCAA
GAGATTGCTTTTTGACCAAAGATTTGAATCTTATTGGTATTGACTATATT
TGGAAGATCATTCGAACTTGTCCAAACAAAAAAATAGTACATAGAGCCAT
TGATATTCTAAAAGAAAAGTATACTCAGCTTGATCCATCTCTCAGAGATG
AAGATGAAAATATTGAAAATACTATACTCAGCTCCTTTTTCGACAAGTTA
TATATG
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