EMLSAT00000012453, EMLSAT00000012453-708300 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012453
Unique NameEMLSAT00000012453-708300
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s915supercontigLSalAtl2s915:34803..37041 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012453 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012453EMLSAG00000012453-695219Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000055915EMLSAE00000055915-764843Lepeophtheirus salmonisexon
EMLSAE00000055916EMLSAE00000055916-764844Lepeophtheirus salmonisexon
EMLSAE00000055917EMLSAE00000055917-764845Lepeophtheirus salmonisexon
EMLSAE00000055918EMLSAE00000055918-764846Lepeophtheirus salmonisexon
EMLSAE00000055919EMLSAE00000055919-764847Lepeophtheirus salmonisexon
EMLSAE00000055920EMLSAE00000055920-764848Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto770069auto770069Lepeophtheirus salmonispolypeptide
EMLSAP00000012453EMLSAP00000012453Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012453

>EMLSAP00000012453 ID=EMLSAP00000012453|Name=EMLSAP00000012453|organism=Lepeophtheirus salmonis|type=polypeptide|length=607bp
MKHSNMKSSFIVFIIFSFSIILFPLSFALLSKCSILPHLQEWLFSYLSKR
AIVSTILIMDPSQKMENTNFVMNLYHITTNHGSSFSTLDLNPHLIRNLPH
SNNLFIVIETPGLLQFLNKISSNALTKNHWLILNQDIPLINFTYISGISL
YSQLFVLEPNSGVYEIYRKNNNLPRVINQIYDQNLRPTKNFVYHLIERRK
NLSGVTINVGYFNHEIFDPIRQSGFFYELFFMIAHNFNLRINYINCPDNI
YGIRLNGSVYNGILGMIQRGEVDISPMDFTKISARTKDFDFSTFLLKTKL
MLFMQNKKFSEFQWYSILHVFDWQFWISILCLSLVFTLVVFFIRRAIQRT
SEIPIVFPSFLMVFFTLLGQEPSPCINKITSLRLLILNISLFGALISWIF
NGSLISVFTSVKSSLPVQSLNDLVTHSDYRLIIANGTAVTDWFTNTENET
DPSVLDRYRMVYQKIIEGNEEKVFFPFDKIPEILATNKKYVYLGEEFTML
TQTKDYPCRLQASXLDLGRLDLGWIYKRNFEYREFFEYQLKKLKETGMID
REWKLLQIKVKSRLCHYKNKNNDFMPIIIQQIVLIFIILGIGILFALIIL
LFECKIW
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mRNA from alignment at LSalAtl2s915:34803..37041+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012453-708300 ID=EMLSAT00000012453-708300|Name=EMLSAT00000012453|organism=Lepeophtheirus salmonis|type=mRNA|length=2239bp|location=Sequence derived from alignment at LSalAtl2s915:34803..37041+ (Lepeophtheirus salmonis)
ATGAAACACTCCAACATGAAATCTTCATTCATAGTTTTCATAATATTTTC
TTTTTCAATCATTTTATTTCCTTTATCGTTTGCATTATTATCAAAGTGTT
CCATTTTACCTCATCTTCAAGAATGGCTTTTCTCATATTTATCCAAGAGA
GCAATTGTATCTACAATTCTAATAATGGATCCTTCGCAAAAAATGGAGTA
AATAACTATGTCTCTTTTTGTGCTTTAAGCACAAAAACACTAGCAAATTT
TATACACAATATATACCTATTACTTTTAGGAATACAAATTTCGTAATGAA
TCTTTACCATATAACTACAAACCATGGCAGCAGTTTTTCAACCCTCGATT
TAAATCCTCATTTGATCCGTAATTTACCCCATAGCAACAACTTATTTATT
GTAATTGAAACTCCTGGATTACTTCAATTTTTAAATAAAATTTCTTCCAA
TGCTTTGACAAAAAATCATTGGCTAATTTTGAATCAAGATATTCCTCTAA
TCAACTTCACTTATATATCCGGTAAGAAATAAAATCTTAAACTTATAGTG
AAATGCAATCAATGTATTTATTTATACTTAGTCGATTAATTGAAAGAAAT
TATATGTTTATTAATATTTTTTTTTTTTGCAGGGATAAGTCTCTATTCTC
AGTTATTTGTGCTGGAGCCAAACTCTGGAGTCTATGAAATTTATAGAAAG
AATAATAACTTACCTAGAGTCATTAATCAAATCTACGATCAAAACCTCCG
TCCCACTAAAAATTTTGTTTATCACTTAATAGAGAGGCGTAAAAATTTGA
GTGGAGTTACAATTAACGTGGGTTATTTTAATCATGAAATATTTGACCCA
ATTAGACAATCCGGATTTTTCTATGAATTATTTTTCATGATAGCCCATAA
TTTTAACTTAAGGATTAATTATATCAATTGTCCTGATAACATTTATGGTA
TCCGATTGAATGGAAGCGTGTATAATGGAATATTAGGCATGATCCAAAGA
GGAGAAGTTGATATTAGGTAAGGTTAGTTATTTTCGATCTAAGCATTTAT
CGTTTAAGTCAGGATTTCTTTTTACAATGTAGTCCTATGGATTTTACGAA
AATAAGTGCTCGAACAAAAGACTTTGACTTTTCTACATTTCTTCTTAAAA
CAAAGCTCATGCTTTTTATGCAAAATAAAAAATTCTCAGAGTTTCAATGG
TATTCTATTCTCCATGTTTTCGACTGGCAATTCTGGATTTCTATCTTATG
TCTCTCACTTGTATTTACCTTGGTTGTTTTTTTTATAAGACGAGTATTAA
CAGCTGGATTGCTTTGAAATAAAATTATCTTTAACTTCTTAAATAATTTT
AATCCTAGGCTATACAACGAACATCGGAAATACCCATTGTCTTTCCATCA
TTCCTCATGGTATTTTTTACACTATTGGGACAGGAGCCTTCCCCATGCAT
AAATAAGATTACATCTCTACGATTGCTTATTTTAAATATATCATTGTTTG
GTGCTCTAATCTCATGGATATTTAATGGTTCTCTTATTTCTGTATTCACC
TCCGTAAAATCATCCTTACCAGTTCAAAGGTATACCATATTTTTGAAAAA
GCTGATTAAAGAAAATAATTTATATTTGTATAGCTTAAATGACTTAGTTA
CACATTCAGACTATCGATTGATAATTGCGAATGGTACTGCTGTCACAGAT
TGGTTTACTAACACGGAGAACGAGACTGACCCCAGTGTTTTAGATAGATA
TAGGATGGTTTATCAAAAGATAATAGAGGGTAATGAGGAGAAGGTTTTTT
TCCCGTTTGATAAAATCCCTGAAATTTTGGCTACCAATAAAAAATATGTC
TATCTTGGAGAAGAATTTACAATGTTAACTCAAACAAAAGACTATCCCTG
TAGACTTCAAGCAAGCWCACTCGACTTAGGAAGGCTTGACTTGGGATGGA
TTTATAAGAGGAATTTTGAGTATAGAGAGTTTTTTGAATATCAATTAAAA
AAACTTAAGGAGACTGGAATGATTGATAGGGAATGGAAATTACTTCAAAT
CAAAGTCAAAAGTCGACTGTGTCATTATAAAAACAAGAATAATGACTTTA
TGCCCATTATAATTCAGCAAATAGTACTCATATTTATTATATTGGGTATT
GGTATCCTTTTTGCTTTAATAATTCTTTTATTTGAGTGTAAGATTTGGTA
AAAATAAAATTTATTAAATATATTGATAAATACAAAAGA
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