EMLSAT00000012486, EMLSAT00000012486-708333 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012486
Unique NameEMLSAT00000012486-708333
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s91supercontigLSalAtl2s91:348479..353390 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012486 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012486EMLSAG00000012486-695252Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056077EMLSAE00000056077-765005Lepeophtheirus salmonisexon
EMLSAE00000056078EMLSAE00000056078-765006Lepeophtheirus salmonisexon
EMLSAE00000056079EMLSAE00000056079-765007Lepeophtheirus salmonisexon
EMLSAE00000056080EMLSAE00000056080-765008Lepeophtheirus salmonisexon
EMLSAE00000056081EMLSAE00000056081-765009Lepeophtheirus salmonisexon
EMLSAE00000056082EMLSAE00000056082-765010Lepeophtheirus salmonisexon
EMLSAE00000056083EMLSAE00000056083-765011Lepeophtheirus salmonisexon
EMLSAE00000056084EMLSAE00000056084-765012Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto776682auto776682Lepeophtheirus salmonispolypeptide
EMLSAP00000012486EMLSAP00000012486Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012486

>EMLSAP00000012486 ID=EMLSAP00000012486|Name=EMLSAP00000012486|organism=Lepeophtheirus salmonis|type=polypeptide|length=760bp
MIAADSTVSGGPNNPGTSTPPAHFLLPPPRGLIVNPAAYLAASPFLYGNS
ALSYAREWQAKLKELQDAKVVXATVAALNSSSQAAQEHLLSKXPSSPSCG
NSSNTNSNNSGGSPPSASLFESLKETSIQKGRSSPKKSSPPLSFTTAASN
SNNSNNILSSLNRKSTELMKMDSNGALNLASSASPSPTDSGGGNNLIMAG
GGGXVGRNGGSTQAFGIEACVVCGDRASGRHYGAISCEGCKGFFKRSIRK
QLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRIMKQIYESYLAPRV
SAVQSERRPIVPANVSNAVTAALAENISISNAKNSSPVYHIYDSPTLLSR
NSLGPSSDSILSSHDTNVKAASTIVLGSGGIGSGGIGDEDNTSTDAGSLN
GDYSHLDASHVLAAREKSLISXAMDVMTKTICEDEEEEPNEDINNSSIDE
SETIIQDSLVNFKLSTPSPTPFYLNVHFICETASRLLFLSVHWVRTIPCF
GQLSYESQVGLVRNSWSDIFVLGMSQCSKSMNLQSILTAIVSHLQTSVSQ
ERLSATRVRQVTSTICKVQEYVRTMSKMCITDHEYAYLKAISLFGADQVG
ISSGKKIDKLRQKTVSELKEYCTLQDDENRFSNLLLRLSPLRSLQPDILE
ELFFAGLIGNVQIDSVVPYILKMEASEYQSQFKWKLMNLETNHHPSWRII
ILRLPLFLYKNEKNKTLIFIWFLVFFLRNEKIEDFFCITVHRSSKDFMLL
NVIFLFFTNL
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mRNA from alignment at LSalAtl2s91:348479..353390-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012486-708333 ID=EMLSAT00000012486-708333|Name=EMLSAT00000012486|organism=Lepeophtheirus salmonis|type=mRNA|length=4912bp|location=Sequence derived from alignment at LSalAtl2s91:348479..353390- (Lepeophtheirus salmonis)
ATGATTGCAGCGGACTCCACTGTTTCCGGAGGACCCAATAATCCCGGAAC ATCCACTCCTCCAGCTCATTTTCTGCTACCKCCTCCACGTGGGCTCATAG TTAATCCCGCTGCCTATTTGGCTGCGAGTCCATTTCTCTATGGAAACTCT GCCCTCAGGTTAGAAAGAATGAAGAGTTTATTATTGTACATGATAATATA ATTTAACAACACTAAAAAGGATCTAATTTCAAATGTAGCAAGCAAGAAAT TTCTTCTACCTTTGCGCGATTTGTAATTTATAACAAGAGGCGTGATTAAT ACATCTATTTTTTGTATTTTTTAATACTATTAACAACTAAAGGCTCCATG TTTGTTGTGTAGTAGTTGTTTTTTTCTTTACATCTGCTTGCATGCTACTT ACTTACACAAAGTTAGTATACATGCAGTAGTAATCACGTGTGGCCTGTGC ATGTTGCAAGTGACTTATATATTATATACGAATAATATGTTTGATGAATG AATTTATACAATATGTTCCTCTCCTTTTTAACTTATTTGTGTTTATATTT CTAGTTATGCACGGGAATGGCAAGCTAAACTCAAAGAGCTTCAAGACGCA AAGGTCGTKSCTGCCACAGTTGCTGCACTCAACTCATCCTCACAAGCAGC ACAAGAACACCTCCTATCTAAATTKCCCTCATCTCCTTCCTGTGGAAACA GTAGTAATACCAACAGCAACAACTCTGGAGGATCCCCTCCCTCCGCATCC CTCTTTGAATCCCTCAAAGAGACTTCAATACAAAAAGGCCGTTCTAGTCC GAAAAAGAGCTCCCCTCCCCTCTCCTTCACTACTGCAGCCTCAAACAGTA ACAACAGCAACAATATTTTATCCTCACTGAATCGCAAATCCACGGAATTG ATGAAGATGGACTCCAATGGAGCCCTTAATCTGGCCTCCTCTGCATCTCC ATCTCCAACTGACTCCGGAGGTGGCAACAATCTTATAATGGCTGGSGGAG GAGGTTSGGTCGGTAGAAATGGTGGCTCAACWCAAGCCTTTGGGATTGAA GCCTGTGTCGTTTGTGGTGACCGAGCTTCTGGTAATTTAAAAAATCCTTT TATTTACTACTATTTTTAATTCAACAATGTGCACATATAGGCCGACACTA TGGGGCTATCAGCTGCGAGGGATGCAAAGGTTTTTTCAAACGGTCGATAC GGAAACAGCTCGGATATCAATGTCGAGGCAACAAAGACTGTGAAGTAACG AAACATCATCGGAATCGATGTCAGTACTGTCGTTTACAAAAATGCCTCGC CATGGGGATGAGAAGTGATTGTAAGTAGGGGTTTTACTGATCGGAAAAGG GGGGAGGGTAGTGGGGATTGGAGCTGTTACKCCAGCCATTCACAGGACTC TCAAGTTCTAAATGTAATTGATGAATAATACGCTCTATTTATTAACAACA GATAATATGTACATTAAACCCCACACAACTTGTGCCGTAGTTTAAGGGCT TTATTAGGGGATGGCTCCTGGATTAGAAATATTCTTATGATTAATTATAA ATGCGTGAGACCCTGATATCCAATGATATCAATGCTTGTGAGGCTAGACA GCCCTGATTCATTCCACCATACTTATAGGCCTATAATTAAAGGTATTTAT GCACATAGCCATGAATGCAAAAGTATTACTGAATAGGCGCGCATCCTCTT AAAATATTTAAAGCAATTCCTATGAATATAATTTATTCCTCCTGTTTTTT TTGACCACATCATCTTCTTCTAGATCATCATATGTTGAAGTCAACATCTG TTTCAAACATTTCCATGTTACCACTTATACGTTTTACTACTACAATAATG GTAGTACAACTWCTGGTTGCTATTAAGGTCWTTTTTTGGYGNGGGGGGGG GGGGAGTTGGAAATTGTGTGGTCTAAATATCCATATATATAGACATACAG ATCTTACTTAATTATTACTATTAAAAACATAACTCTCAAATTATTATGAT GTTAAATATATCTCTCTCTTTTCTTTGCTCCTGGGTACTTTCTTCATATA TATATATATACATATTTAAAACCATAATTGTAATGATAAAATACTAAAAG AGTTGATCTTTTACAAGAAAAAGTTAGAACTACATGTATAGAGAGGGGTT TGCCCATGCCTCAGGTCAAAATTATGCTTCCAACGAGAACAACAGCAAAT GTTATAATGAAGAGGAAACATCCCTTTGATACTTTTTGATATATGCTTTA TTTAACTATAACAGTGATCATTTTAATTACCAACGTTCATTTGTTTATTT CATTTTGAATGTCCATTAAAATGATTCATTTTGTCCCAGTTGCAACTCAA AAATTAGACAAAACTTTTTGAAGGAGGGATTGAGAGTTCTATTGCAGATA AAGATCATGCAATTATTGAATATCCAGGGGTACACTTGCTCCCTCTAGGT GTACGTGGAGGAACGTCATAAATAGATGGTTAAACCTCCGTTATTATATA TTTCATTTGATATCTTTATATTTCATGATGTGGTGCACACTCTAAATCAG TGCCTTACATGATCGATATAATGATGTACTATTTGGATTATAATTACTAA TGAACTATGAGTATTCTGTGGCACATTGTAAAGTTCAAATGCCCAGAGTT ATATTATATAATATTCGTAAATACATGATAAATGAGTCATGTTTATAGAT CCCATAGAAATAATCGCTTCAGTGAATAGTTTGTAACTAAAATGAACCGA TTCTTGTAATTAAATAAGGAATTAGGGGACGTAGAAATGACTATTTCTAC GTGTTTCAACTTGTACATGATCTACTATATTATATTACTTTTCCTCCTCA AATGTTGTAAATTACCTTTAATGATAACAATCATGGAACGTACATAATTG TAATTAATATATAGTCAACTTTTAACAACTTGTCCTTCAACTTTTTTTAT TTTTTCTTCAATATTTGTAATTTTAAAAGTTCGTCCCTTGGTGAGTGTTG TTGGAAGAGAGAATTATTCGTCATTGTTGTCCTTTTGTTAAAACAAAAAA TATCAAGGATTTGCCATTGAAGAAGAAGACGCGCGATTCTTTCTTTTTGG CAAATATTTACATTAACAAACCATGATATTCATTTTTTTATATAATTTTA AATGTAGCTATATATTATATTTAAATACTCTGTATATTCAGTCATGAAAC AGATCTATGAATCATATTTAGCACCCCGTGTTTCAGCTGTTCAATCTGAG CGAAGACCTATCGTTCCGGCCAATGTATCTAATGCAGTAACAGCAGCACT TGCAGAGAATATTTCCATTAGCAACGCAAAGAACTCATCCCCAGTCTATC ACATCTATGACTCCCCTACTCTTCTATCCAGGAATTCATTGGGACCTTCA TCAGGTAAGTTACACAATCCTTGATTGTATATTAAGTAATGACATCCAAT GTTGTGTCCTTCACGATGCATTAAATGTGACCTTTCTTTTTTCTCTTTCT CATCATGACTTTTAGATTCCATTTTGTCATCCCATGATACCAATGTTAAA GCGGCATCAACTATAGTATTAGGCAGTGGTGGAATTGGAAGCGGAGGMAT AGGTGATGAAGACAATACTTCCACAGATGCGGGTTCCCTCAACGGAGACT ATTCTCACCTAGACGCCTCACATGTCCTCGCTGCAAGAGAAAAGTCTCTC ATTTCASGAGCCATGGATGTCATGACGAAAACAATCTGTGAGGATGAGGA AGAGGAGCCCAATGAGGACATTAATAACAGTAGTATCGACGAGTCAGAAA CTATCATTCAAGACTCTCTTGTGAACTTTAAACTCAGCACTCCAAGTCCT ACTCCATTTTATCTTAATGTACATTTTATCTGTGAAACAGCATCCAGGCT CCTCTTTCTTTCCGTTCACTGGGTCAGAACCATTCCTTGTTTTGGTCAGT TGAGGTAAATATAAGTGCCAGCAATATGGATTTTTGTCAATCCTAATATC ACTACATTACAGTTATGAAAGCCAGGTCGGCCTTGTTCGTAACTCATGGT CGGACATATTTGTACTCGGTATGTCTCAATGCTCAAAGAGTATGAACCTC CAAAGTATTCTAACCGCTATCGTCAGTCATCTACAAACTTCAGTCTCTCA AGAAAGACTGAGTGCCACAAGAGTACGTCAAGTTACGAGTACCATTTGTA AGGTTCAAGAGTATGTACGAACCATGTCAAAAATGTGCATCACGGATCAC GAATATGCCTATTTAAAGGCTATTTCTCTCTTTGGAGCAGGTAATTAATC ATCTTCATAATATTTCATTATAGCGAACATTCCTTCATACCTTACAGATC AAGTCGGTATATCCTCAGGAAAGAAAATCGATAAACTCCGACAAAAAACA GTCTCTGAGCTGAAAGAGTACTGCACTCTACAAGATGATGAAAATCGCTT CTCAAACTTGCTCCTTCGTCTTTCGCCCCTTCGCTCTCTTCAACCCGACA TTTTAGAAGAACTCTTCTTTGCTGGACTCATTGGCAATGTTCAAATAGAT TCAGTTGTACCTTACATTTTAAAGATGGAAGCATCCGAGTATCAGTCTCA ATTCGTCAAAAGTAAAGACATTCATTAATTAACTTTCATGGTTTTCTAAA CACTATTTTCTTATCCATCATATAGAAATGGAAGTTGATGAACCTGGAGA CGAATCATCATCCAAGTTGGAGAATAATCATTCTTCGTCTACCCCTGTTT CTTTATAAGAATGAAAAGAATAAAACACTGATTTTTATATGGTTTTTGGT TTTTTTTTTGAGGAACGAAAAAATTGAGGACTTCTTTTGCATTACTGTTC ATAGAAGTAGCAAAGATTTTATGTTATTGAATGTTATTTTTTTGTTTTTT ACAAACTTATAA
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