EMLSAP00000012486, EMLSAP00000012486 (polypeptide) Lepeophtheirus salmonis

Overview
NameEMLSAP00000012486
Unique NameEMLSAP00000012486
Typepolypeptide
OrganismLepeophtheirus salmonis (salmon louse)
Sequence length760
Associated RNAi Experiments

Nothing found

InterPro
Analysis Name: InterproScan 5
Date Performed: 2014-05-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001723Steroid hormone receptorPRINTSPR00398STRDHORMONERcoord: 578..593
score: 35.25
coord: 633..650
score: 35.19
coord: 503..519
score: 30.25
coord: 482..503
score: 28.28
IPR001628Zinc finger, nuclear hormone receptor-typePRINTSPR00047STROIDFINGERcoord: 277..285
score: 62.11
coord: 220..236
score: 58.62
coord: 236..251
score: 61.45
coord: 269..277
score: 67.83
IPR001628Zinc finger, nuclear hormone receptor-typeSMARTSM00399ZnF_C4coord: 217..288
e-value: 1.1E-38
score: 144.5
IPR001628Zinc finger, nuclear hormone receptor-typePFAMPF00105zf-C4coord: 219..286
e-value: 1.1E-30
score: 105.4
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS00031NUCLEAR_REC_DBD_1coord: 220..246
IPR001628Zinc finger, nuclear hormone receptor-typePROSITEPS51030NUCLEAR_REC_DBD_2coord: 217..292
score: 19.197
IPR000536Nuclear hormone receptor, ligand-binding, coreSMARTSM00430HOLIcoord: 481..645
e-value: 1.3E-25
score: 101.1
IPR000536Nuclear hormone receptor, ligand-binding, corePFAMPF00104Hormone_recepcoord: 464..658
e-value: 2.9E-27
score: 94.9
IPR008946Nuclear hormone receptor, ligand-bindingGENE3D1.10.565.10coord: 455..674
e-value: 2.2E-57
score: 193.9
coord: 278..314
e-value: 2.2E-57
score: 193.9
coord: 386..387
e-value: 2.2E-57
score: 193.9
IPR008946Nuclear hormone receptor, ligand-bindingSUPERFAMILY48508Nuclear receptor ligand-binding domaincoord: 464..674
IPR013088Zinc finger, NHR/GATA-typeGENE3D3.30.50.10coord: 218..277
e-value: 1.1E-28
score: 98.8
IPR000936Alphavirus E2 glycoproteinPFAMPF00943Alpha_E2_glycopcoord: 250..363
e-value: 1.2E-4
score: 20.7
NoneNo IPR availablePANTHERPTHR24083:SF25NUCLEAR HORMONE RECEPTOR HR78coord: 217..692
NoneNo IPR availablePANTHERPTHR24083NUCLEAR HORMONE RECEPTORcoord: 217..692
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 218..294

Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
EBI Gene Prediction Pipeline2013-07-17
InterproScan 52014-05-02
KAAS/KEGG2014-05-09
InterproScan 5, GO-Slims (generic)2014-05-10
Cross References
External references for this polypeptide
DatabaseAccession
Ensembl Metazoa (protein)EMLSAP00000012486 (primary cross-reference)
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesType
EMLSAT00000012486EMLSAT00000012486-708333Lepeophtheirus salmonismRNA


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EMLSAP00000012486 ID=EMLSAP00000012486|Name=EMLSAP00000012486|organism=Lepeophtheirus salmonis|type=polypeptide|length=760bp
MIAADSTVSGGPNNPGTSTPPAHFLLPPPRGLIVNPAAYLAASPFLYGNS
ALSYAREWQAKLKELQDAKVVXATVAALNSSSQAAQEHLLSKXPSSPSCG
NSSNTNSNNSGGSPPSASLFESLKETSIQKGRSSPKKSSPPLSFTTAASN
SNNSNNILSSLNRKSTELMKMDSNGALNLASSASPSPTDSGGGNNLIMAG
GGGXVGRNGGSTQAFGIEACVVCGDRASGRHYGAISCEGCKGFFKRSIRK
QLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRIMKQIYESYLAPRV
SAVQSERRPIVPANVSNAVTAALAENISISNAKNSSPVYHIYDSPTLLSR
NSLGPSSDSILSSHDTNVKAASTIVLGSGGIGSGGIGDEDNTSTDAGSLN
GDYSHLDASHVLAAREKSLISXAMDVMTKTICEDEEEEPNEDINNSSIDE
SETIIQDSLVNFKLSTPSPTPFYLNVHFICETASRLLFLSVHWVRTIPCF
GQLSYESQVGLVRNSWSDIFVLGMSQCSKSMNLQSILTAIVSHLQTSVSQ
ERLSATRVRQVTSTICKVQEYVRTMSKMCITDHEYAYLKAISLFGADQVG
ISSGKKIDKLRQKTVSELKEYCTLQDDENRFSNLLLRLSPLRSLQPDILE
ELFFAGLIGNVQIDSVVPYILKMEASEYQSQFKWKLMNLETNHHPSWRII
ILRLPLFLYKNEKNKTLIFIWFLVFFLRNEKIEDFFCITVHRSSKDFMLL
NVIFLFFTNL
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