EMLSAT00000012571, EMLSAT00000012571-708418 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012571
Unique NameEMLSAT00000012571-708418
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s933supercontigLSalAtl2s933:107707..108795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012571 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012571EMLSAG00000012571-695337Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056467EMLSAE00000056467-765395Lepeophtheirus salmonisexon
EMLSAE00000056468EMLSAE00000056468-765396Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto772341auto772341Lepeophtheirus salmonispolypeptide
EMLSAP00000012571EMLSAP00000012571Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012571

>EMLSAP00000012571 ID=EMLSAP00000012571|Name=EMLSAP00000012571|organism=Lepeophtheirus salmonis|type=polypeptide|length=227bp
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDVSVTDPDK
YPHMLSVKNCFIRGSVVRYVQLPHEEVDAQLLQDAARKEASNNQNGWZVD
QXILSEEDRVICIRFGHDWDPTCMKMDETLFGIAERVKNFCVIYLVDITQ
VPDFNKMYELYDPCTVMYFFRNKHIMIDLGTGNNNKINWPMEDKQEMIDI
IETVYRGARKGRGLVVSPKDYSTKYRY
back to top

mRNA from alignment at LSalAtl2s933:107707..108795-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012571-708418 ID=EMLSAT00000012571-708418|Name=EMLSAT00000012571|organism=Lepeophtheirus salmonis|type=mRNA|length=1089bp|location=Sequence derived from alignment at LSalAtl2s933:107707..108795- (Lepeophtheirus salmonis)
ATGCTTTTCTACTCTTTTTTCAAGTCCCTTGTGGGAAAAGACGTTGTCGT
GGAACTGAAGAACGATCTAAGTATTTGTGGAACCCTTCATTCCGTGGACC
AGTACCTCAACATCAAACTCACGGACGTGAGTGTCACAGATCCAGACAAA
TATCCTCATATGCTCTCTGTGAAGAACTGCTTTATCAGGGGCTCCGTTGT
TCGCTACGTTCAATTACCACACGAAGAAGTGGACGCACAGCTCTTGCAGG
ACGCTGCTCGAAAGGAAGCCTCCAACAATCGTGCTTGAGAACTCTTGCAT
CCTTTTTCCATACAAAAGTGTACGTTTCTCATTCCACATATTCAAATCTT
CTATCCCTTCACCAAGTTCTGCAGATTCACATTCTATTCATTAGTAATGC
TGACTCTTGAGGTTGGAGGGAGGGAACTGAGGCGCTTTAGAAAGGGATAT
CCTGCAATTTCAATCATTCCTTCTCTTCTTTAAAAAAAGATGTTAAATAC
ATTTTGACTTTAATTCATTAATGAGGGGGGGGGGGAAAACCTTTTGTGTA
TGAGTCATCTATGACTTACAGATGAATTTTTTAATCATTGCTTAATAACT
AAACGTATTTAATTAATCAATTATCATTATATTTACAGATCTATTTATTA
ATATCTCAAAATGTCTTACATGATTTCACATTTAGAGAATGGCTGGSAAG
TGGACCAAGSCATTCTCTCCGAAGAGGATCGCGTTATTTGCATTCGCTTT
GGGCATGATTGGGATCCTACATGTATGAAAATGGACGAAACTCTTTTTGG
CATTGCAGAGAGAGTCAAAAACTTTTGTGTCATCTATCTTGTGGATATTA
CTCAAGTTCCCGACTTCAATAAAATGTACGAACTCTACGACCCTTGCACT
GTCATGTATTTCTTTCGAAATAAACACATTATGATAGATTTGGGTACCGG
TAATAATAATAAAATCAATTGGCCTATGGAGGATAAGCAAGAAATGATTG
ATATCATTGAAACAGTTTATCGTGGAGCTCGCAAAGGTCGGGGTCTTGTC
GTTTCTCCCAAGGATTATTCAACAAAATACCGATATTAA
back to top
Add to Basket