EMLSAT00000012662, EMLSAT00000012662-708509 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012662
Unique NameEMLSAT00000012662-708509
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s95supercontigLSalAtl2s95:12461..12937 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012662 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012662EMLSAG00000012662-695428Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000056843EMLSAE00000056843-765771Lepeophtheirus salmonisexon
EMLSAE00000056844EMLSAE00000056844-765772Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto769024auto769024Lepeophtheirus salmonispolypeptide
EMLSAP00000012662EMLSAP00000012662Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012662

>EMLSAP00000012662 ID=EMLSAP00000012662|Name=EMLSAP00000012662|organism=Lepeophtheirus salmonis|type=polypeptide|length=135bp
MSTDTEGKILYTTGGDSVIKSWNIKSGQCLRTMEGHTDSVICMFVTNRLM
YXGSADTTAKCWITEFGDCTRTYKGHKHSVICLRFEKGTIFTGSGDGVSR
AFEAKSGTLKRVFVGHESAINALAVVNDKLYTGXI
back to top

mRNA from alignment at LSalAtl2s95:12461..12937+

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012662-708509 ID=EMLSAT00000012662-708509|Name=EMLSAT00000012662|organism=Lepeophtheirus salmonis|type=mRNA|length=477bp|location=Sequence derived from alignment at LSalAtl2s95:12461..12937+ (Lepeophtheirus salmonis)
ATGTCCACTGATACAGAAGGAAAAATCCTATATACAACAGGAGGTGATTC
TGTAATAAAATCGTGGAATATAAAAAGTGGTCAATGCTTGAGAACTATGG
AGGGACATACAGATTCAGTGATTTGTATGTTTGTAACTAATCGTCTCATG
TATMCTGGTTCGGCAGATACAACAGCCAAATGCTGGATAACTGAATTTGG
TGACTGTACCAGAACTTATAAAGGTCATAAACATTCAGTAATATGTTTGA
GATTTGAAAAAGGGACGAGTAAGTTTTAGCATAATAAATCTCTACAAATT
TATATTTTTTTAAATGTGTGAAAATTGATTTGTATAGTTTTTACTGGATC
CGGGGATGGAGTCTCTAGAGCGTTTGAAGCAAAATCCGGTACATTAAAAC
GAGTGTTTGTTGGCCACGAAAGTGCTATTAATGCTTTAGCTGTTGTGAAT
GACAAACTATATACTGGANTCATCTGA
back to top
Add to Basket