EMLSAT00000012775, EMLSAT00000012775-708622 (mRNA) Lepeophtheirus salmonis

Overview


Name	EMLSAT00000012775
Unique Name	EMLSAT00000012775-708622
Type	mRNA
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s96	supercontig	LSalAtl2s96:406658..411623 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016

Properties


Property Name	Value
Logic name	ensemblgenomes
Biotype	protein_coding
Evidence	IEA

Cross References

External references for this mRNA


Database	Accession
Ensembl Metazoa (transcript)	EMLSAT00000012775 (primary cross-reference)

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
EMLSAG00000012775	EMLSAG00000012775-695541	Lepeophtheirus salmonis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
EMLSAE00000057383	EMLSAE00000057383-766311	Lepeophtheirus salmonis	exon
EMLSAE00000057384	EMLSAE00000057384-766312	Lepeophtheirus salmonis	exon
EMLSAE00000057385	EMLSAE00000057385-766313	Lepeophtheirus salmonis	exon
EMLSAE00000057386	EMLSAE00000057386-766314	Lepeophtheirus salmonis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto777355	auto777355	Lepeophtheirus salmonis	polypeptide
EMLSAP00000012775	EMLSAP00000012775	Lepeophtheirus salmonis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at LSalAtl2s96:406658..411623-

protein sequence of EMLSAP00000012775

>EMLSAP00000012775 ID=EMLSAP00000012775|Name=EMLSAP00000012775|organism=Lepeophtheirus salmonis|type=polypeptide|length=132bp
VFIRSKGHNPIIAAVKSGVTTFTKPNNVTVSSIIKKFDSGFGYLAVKEIN
QIMLHCEGLFQDGSLGSLNLTGTNIVFQQMTLYDESNFTSVGFASENNLQ
ILGPHVTKRHEKEFFHHFVHMTHDSSKDGRNI

mRNA from alignment at LSalAtl2s96:406658..411623-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAT00000012775-708622 ID=EMLSAT00000012775-708622|Name=EMLSAT00000012775|organism=Lepeophtheirus salmonis|type=mRNA|length=4966bp|location=Sequence derived from alignment at LSalAtl2s96:406658..411623- (Lepeophtheirus salmonis)
GTATTCATTCGTTCTAAAGGGCATAATCCAATTATTGCAGCAGTGAAATC
TGGCGTGACTACATTTACAAAACCTAATAATGTAACTGTTTCATCCATTA
TTAAAAAGTTTGATTCTGGATTTGGATATCTCGTTCACCAATCCGAGAAT
GCTACAGAAGAAGACGTTCCAAATAAACTCTAGTAGGTATTTGGCATTTG
TATTGAAGGTTTTATCAAAACTATAGAGTAAGTAATGAAAAATGCAGGTT
AGGTTGAGTAGATTCCTTGTATTAGTAGTATATGATATATATCAACTTGT
TATTTTCAGTCATTTTTCCTCGTGACGTATGTAGCTTATTCCTCCACAGA
ATTTACCTTGTAATTTCAAGTTAAAAAGGGGGAATTCATGTTTAATTATG
GAGTAATACCTTAGTATACTCGACGCCCCTAGCGGACAAAAACGTTATCG
TGTAGCCAAATATTTTCGAACAAATTATTTATCATGTGGCCTTCATTTTC
CACTTAGTTTATAGCTTTGGTTTTTATTAATATAATAGATTATTTTGATT
TTTTCTAGCCTTCGCTTAGCTGTAACGATTGACTCAGCTCTCAAGAAATA
CTTTGACTTCAATGCTCCTAAGGCTGTCAAAGAAATCAATCAAATCATGT
TGCATTGTGAAGGACTCTTTCAAGATGGCTCCTTAGGTATAATCTTTAAA
TATTTATAACATTAAAAGGCAGTTTAAACCTTACAGGAACAAATATAGTG
TTTCAACAAATGACACTTTATGATGAAAGTAATTTTACATCCGTTGGATT
TGCTTCTGAAAATAATTTACAAATATTGGGACCCCATGTTACTAAGAGGC
ATGAAAAAGAGTTCTTTCATCATTTTGTACATATGACACACGATTCAAGC
AAGGATGGGGTGTTGGGAATGTCATATATTGGACAAATTTGTTCACAAAA
TGCTTCGTTGCGAACGTCCATCATTGAGTATAATTTATCACCTCTTCATA
CAGCCTTGGTACTTTACTTGGTTGTCCGGAATTAGAGTCCCACTAAAAAA
ATTAATTTACCCATAAATTAGGGTTTGCATTAGAATTTTATTTATTCTTT
TTTACAAGTTTAATATTGTCCAATTATATTTCATTCAATGCGCTCCTCTT
GATTAAAACAACATGACGGAAACAACTCAACACTAACTTGGAGATAGTAC
TCACAAGTTTTGCAGGATCTAGAAACTGCTTTGACCTCTCTTCGACTATA
TCCTACATTGCAAAGTCAATGGGGTTAAGATCCGGTGAAGAAGATCAAAA
TTACATTGCACCATTCTTAGCCTTCATATACGTCTTAATTTATTGAGATA
AAGTTGATGGGACTCTAATTATGGACTATCTTGTAATACATCACATAAAA
AAATTGGACATAGTGTCACTTTGATTTCTTATTAGGTGCTGGCCCATGAG
ATTGGACATAACCTTGGTCTAGTACATGACTCTGAAAATTGTGTGGGTAT
AATGTACCCTCTAATTATTGGATCGGATGTATGGTCCAATTGTAGCAGGC
GTCAACTAAAGGGATTCTATAACTCAATTTTGAAAAAGCATGGATCGTTT
TGCTTGGAAGAAGGGAGTGGTAAGGACAATAAGTAGCCTAATTAATTAAT
TATAATCAGAAGTGTGAACTCGAGTCGTTATAATTTGAGGACTTGGAATA
CTGTAGTACTTTAGTCCTCCTTTTCGTATAAAATTTGTCTGGCCTCTCTT
AATCATTAATATAGCTACCTTTAGTGGCAATGATGGCTTCCAGGTGGCAG
TGGAAGGCATGGCACCCGGMCAGGATGTAGMTATCTGTCATGGCGTCCCA
ATGCTGGCCTAAAGTGGCCCTCGGTGTTTGGATGACGGACACTACAGGTC
TTTCCTCGACATGCACCCAAAAGGTGTAGTCGAGGGGGTTGGAATCAGGG
CTGTATAGTAGCCAAAAGTGTCAAAAAAAGAGTTCAAAAGAACTCAAAAG
ACTCATTCAAATGAGTTAAGTAAAGGAGGAGATAGATGTCTTTCATTGTT
GCTGTCAAAAGTGGCCTCTCCACCCTTAAAAGGCTCTTTCCACCCACTTT
TTGGATAACTCTCTGGACAGTCTTGTGTGAAACTCCGAGATATCTTGAGT
GGGTACTCATTGACTTGAGTAAATTGATCTGGGCTGTGTTTTTTGAACTC
CTCTTGGTCCAAGTTGGCCTTTATGAAAAAGTTCTTCTTCCTTTCCAACG
TTTCGGACATGTTGATGGTGTCCTGGAGACGCTCAACTTCTGGGAGTGCC
AAAACTCTCAAGTGTCATTCCTCGACTTGTAGCTAAGCTAGAGAGCTAAG
ATTTGCTTTGTTTATGCTTTAATATTTCGAAATATGAATTAATTTCAATC
ACTCAACCTTCATTAATGATTGAATTAGTAAGTGAACAGATTTCAAACGA
CCATCCAGTAATATAAGCTACCTTACAGTATATTTTGTTGGATAAAAAGT
TTGGTTTTTCTTTTGGTATTATTAATTAAGAAGTAGTTTTAAGGATGTCA
TTAATGGAGTCTAAGATTCCATATAACTTACCTAACCGAAACCTGAGATA
TGAAAATAAAGAGACCGATGGTACAACCTTAGGTCTTAGAATTGACTGGG
ACTCGGAGCCATTCAAACTCAGAATTACAGTTATTTGTCCTTTGAACTCA
GAGTTGTTTTTTAATACGTTTTCTTTTAACACAGATAATTGTGATAAACT
TACGCTCGCATGTATGGGTTATTGTATTTTTCGTATAAACTATTAGGCTT
GTAAATCCTAAGAATTTTTTTAGTGTGCGAGTTTTTTGTTCTCGTTGGCA
AACTGTACAGGTTTTTTATTTTCTAATTTCGATATAATTCAATTCTTGAA
GAGAAAACATCAAAGTATCAAGTGTAACCAGGAGTGTTGAATGAATGAGT
GTAACGCTGATGATTTGTTGGGAGAGTTATAAGCAGTTATTAAAATTATA
TGATCCGCTGTGTGCTAAAAAAATAATCAGAAAATTAACATGGTTTGAAG
AATTTTTGGGAGAAAAGCAGGTTAATAGTCATGCAGTCCTATTGAATTTG
TTGCAACCTTAGGCATTAACCCCTTCTCCGTATATAGCAATGATAAAGGT
AGGAATTACTCCAATGTCGATCCTCAATTCTACTAACTTATAACTCCCCA
ACAAATCCTGAATATTACACTTGGCGCAAATAGTACTTACTTTAAAATTC
TTCTTCTCTCTTAAAGAATACCATAATCATGTTAACATATTTTCGGGTTG
CAATATGAAAAATACCATTATTTGACATCTTTTTAATCTTTGGTAATAAT
TGCATGTCCTTACTTTAAGAATTGAGTCCTTCCTGCCTATTTTTTTTTGC
TTAATACGGAATAGAACTGCTGTTTATTCCCTTCCTCTATTCCTATTTGC
TCCTACTCTCCATCAAAACCTTCTTCAAATTGTCAGGGCTACGTGTAAAA
TAATAATATAATTTTTGTTAAGCAATTTGCATTACACTGTTACTCAAGAA
GTTAAAATAATTAGTGCTGGAACTGGTTATATGTTTACATTTAGAAGCGA
AAAAACGATGCAACATATAATGTTATTTATGAAGAAATTAGCCAGGGTGA
ATTGTGGGCGCGTGCTTGACCATATTGTAAACTGAAGGGAAGACGACTGA
GATGAAGACTTAATCAAAACTAATTATTTCATACGATCCCTGTTTTACTT
ATTATATCATTCTTAAGTATTTTTTTGTCGTTTTAAATTGATTTCGATTA
TGAATTGTTTTTTTATTATGGTTATTAGGAAAGTAAATGTATATAATAAT
AAAAAGTGTATTTATGACATCATTTCCCTTTCTTTTTTTGTCTTACATAC
CGGCAGGGCATATTTTTTGCTACTCACAAGCATAACAGAGAACATTATAG
ATATGGTTGTAAATTGTAAGCATTTTCGGTGAATGTAAAAACCCAAAAAT
TAACAAGATAACCTTGACAATTTGAAGAATGTTTGAGAGGTTAATGACTT
AGCAGGCATGCCGTTTTGCATACTAAAACCTAAAGAGAGCTCCTTGCTTT
GTCTATAATTATATTTTTTTTATTATTATTGACTGTAATTTGAGCAATGG
TATGGCAGTAACAGAAAAATAAGAAGAAGATAATACTAAAACTCCACTAG
TGTAGAATAAGCAGGCTACCAACTGATATTATCGTTGTTATTTTACATGC
TCTGGGATATTGTTTATATTGACTTCTCTAGCTATGCCTAAAGGTCCCGC
TTAGTTAGTATGATAATTCGGGATACTATTATTGTAAGAACGCGAGGAGA
CATATGGTTTTATTTATTTTGTTATACATTGTTAAAACAATTTACACCAA
ATATAGGTAATAATGCTTAGCTCAGAGGGAGAAGTTAAAGCCACGACGAC
CCATTAAATAATAAACAAAAAAGGAGAAAGAGCAAACGCAKCAGCCATTT
TTCCTTTTCTAATTTCTAAACTTACTTTTTCGTTAGAAAAAAAATAACAT
ATGTACTAGGTTATAATAGACTGTGAGGGCGAAATTTCATACAAATTATC
TGTGTTTTATCACTTCCTTAGATCCCCCTCCAACTACCTGTCCAAATGTA
CTTTCGACCTGACTAGAACTTATAAATGAGTAATTAAATTTGTTAAACAT
CTGATTACAATAACTATACAATACTATGCATGTTTCATTCTCGCGTATTC
TAGGAGTTTGGAGTAAGTGGACAAGTTGGTCGAAATGTAATGTCAAATAC
AATAGGGTACGAACGCGTCATTGTGAAATGAATGTGTGCAGAGGAGAGGA
GAAAGAGAGTATGCAATGTGATCCATGTCTCAAAAAATGGGAATTAAATA
CAGCATTAAGAGCCACGCCTTGGAATGACTACAAAATACTTAATTTTCTA
TTAGAGAAACATATGA

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