EMLSAT00000012783, EMLSAT00000012783-708630 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012783
Unique NameEMLSAT00000012783-708630
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s96supercontigLSalAtl2s96:738616..746214 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012783 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012783EMLSAG00000012783-695549Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057424EMLSAE00000057424-766352Lepeophtheirus salmonisexon
EMLSAE00000057425EMLSAE00000057425-766353Lepeophtheirus salmonisexon
EMLSAE00000057426EMLSAE00000057426-766354Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto779549auto779549Lepeophtheirus salmonispolypeptide
EMLSAP00000012783EMLSAP00000012783Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012783

>EMLSAP00000012783 ID=EMLSAP00000012783|Name=EMLSAP00000012783|organism=Lepeophtheirus salmonis|type=polypeptide|length=132bp
SGGVGKSALTVQFVQGIFVEKYDPTIEDSYRKQVEVDNQQCMLEILDTAG
TDTDDVPMVLVGNKCDLEDERVVGKDQGLNLAKQFNNCSFMETSAKAKIG
VTHLFYDLVRQIACRMPENQPKRNKRKKCIIL
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mRNA from alignment at LSalAtl2s96:738616..746214-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012783-708630 ID=EMLSAT00000012783-708630|Name=EMLSAT00000012783|organism=Lepeophtheirus salmonis|type=mRNA|length=7599bp|location=Sequence derived from alignment at LSalAtl2s96:738616..746214- (Lepeophtheirus salmonis)
TCAGGAGGTGTTGGAAAGTCCGCTCTTACAGTGCAATTTGTACAAGGGAT
TTTTGTTGAAAAATACGATCCTACCATTGAAGATTCATATCGTAAACAAG
TTGAGGTTGATAATCAACAATGCATGTTAGAAATCCTGGATACGGCTGGA
ACGGTAAGGTTAATAGATAGATGGCATGGCTTGTATTTATTCTCTGTTTT
TACGTTTGTACATGTAGGAACAATTCACGGCGATGAGAGATTTGTATATG
AAAAACGGCCAAGGATTTGTTTTAGTTTATTCAATTACTGCACAATCTAC
ATTCAATGATCTTCAGGATCTTAGGGAACAAATTCTTCGTATTAAGGTAA
ATTTTCTTTTTACTCTATTTAAATTAATGACCCTATATTTGAAACATTAG
TTTTGGAATCTTCGATTTGAGTAATTTGATAATTATTACACATACATTAT
AATCAATGGATCATTTAACAGGATAAAACGTGTTTTTTTTACTTTATAAC
CTTAACCAAACGATTTGATGCATAGAAAAAAGTACTAAAATCCCTTGTGT
TTTCTTTAAAAGTTGCACATTTAATTTTAGAGGGAGGTGTTTTTATGGAG
AAAATAGTTCATTTTTGTATATATAAACATCTGCAAATACAGTGGGTGTG
TTACTTAGAATAATTTAAAAAAATCTTAATTTCTAATCAAAAACTCGAAA
ATATTGTATTAAAAAAAAAGAAAAAAGTTTTACCGATTTTTTACTGTTCA
CTCTGACTTTATTCTGATACATTTCGTTTGGTTATATTTGTGGTGTCAAC
ATAAAACAATCTTGAACAAAAATCAAGAGAATCCCCATGTATTTTTTTAC
TTAATATATACGTACATCCCATCTATTTCAGTACTTATTTGAGTCAATTA
TAGACTTTGTATTCAAATTTGCTGGATGAGTTTTGATATCCAAGTATTTA
AGCTATGGTTTCAAAGCTTTATTTTATTTAATAGACTTATATTGGCCCCC
AGGTGGGGCCATATTTCAAATGCAATCTATGTATTTATCATTCTTTTATT
GCAACTATCAATTTTGTCTATTTAAGTGCAATTACCGACACACCCAAAGG
CTTAATAAGAATAGTTTGTTGATAGAAATTGACTATTATTCGTAGAAGAA
CGTAAATGTTAATAATCAACCGTCAATTTTGATAAAAATTATTCTAAGTT
GCTATTGTGTTGAGGGGCTACATTTTAGTCTGGCAGTTATTTGATGAGGA
AAAGAAAGTATAGTCATATAAGCATGTTTCATTTTGTTTCGTAATTAGTG
TTGTGTCTGTCTGTATTTAGGATCAACTCAAGACTCCAATCCCTTCCAGT
TCAGTCTTGCATGTCAGTTCTAAAAACTTTTATAGTTCGGTCCTTCTTGA
CGTCACTCAATATTATTTCTTCTTTCTTTAATTCGTTCTAGTACTGAATG
TCCTAAAAAGTGATAGGACCGGTCCTTAGACTGGACTGGACCGAATAAAT
TAAAAATGCCATAACACTACTCTTAATCGTTGAAAGAATACATTTCGCCT
CGTCATAGCTGATGGAATTAACAGTTCTATATTAGAGGCTTAAATATTAG
TGATGGAACGATTTAAAAAAAAAATCCCCATTCCGATTCTTTCATATTCT
AAATAATAGTTAAAAAATKCCATTTTGCTATCAGGGGCATCCACAGAATT
GTATTTTAAGGGGGAGATACTTTGTTCTTTGGATTAAAAAAAAATAATAA
AAAATCCAAAAATTAACTTTCAACTATTAAATGTTATAAAAAAAATTTCA
AATATACAATTAGAGAGATTTTTTTTCAAAAATTCACAACTATTCACAAA
AAATTAATTTTTTTGGAATAACGTTTCAAAAATTCTCAAAAAAAATTCCA
AAATCTATAGCTATTCACAAAAAAATTTCAAAAATTAAATTTCTAATATG
AAATTTCATGAGAAAAAAAATTCATATACATTAAAATAAATATAGTTATT
TATAAAAAATTAAATTTTTTGATAAATAAATTAAATATCAAATATTAAAT
TTTATATAAAAAGGAAAAATTCCTTAATTTTGGTGGGGGGGAGGGGGGAC
AATTATTTCTCATAACTTAGAAAATTAATAAATAGTTAAATACCAGTAAT
AAATAAGAATTGGAATTGTAAATTAGACATAATTTTTCCGATGGATATCC
CGATTCCAGAGAAAACACTCGATTCTGATTAATTGTCCCATCACTATGAA
ATGTACTTAATGTTTATTTATTGATATATTTTTTTCTATGTGATTAACTC
AAGGTATTTTTCACATCTTAATTGTTTTTTTGTTTTTTTCTGTAGGACAC
TGATGACGTACCAATGGTTTTGGTAGGAAATAAGTGTGATTTAGAGGATG
AAAGGGTAGTTGGAAAAGATCAAGGTCTTAACCTAGCAAAACAATTCAAC
AATTGTTCTTTTATGGAAACATCTGCCAAGGCCAAAATTGGAGTTACTCA
TGTAAGTTAGAGCTACATATGTATATTTTTATAAATTATATTTTCACTTT
TGTATATTATTTATGTATGAATTTATATATTATGAAAAAAAAAACAAAGT
ATATTTATTTGATGACNNNNNNNNNNNNNNNNNNNNNATCTATAAGTTAA
CCTTTTTAATTCAATTNCTTGTTTTTTGGATTTTTTTGAACAGTTAAATT
TCCAAAAAAAAATTAAAATTAAAAAATTTTTGAAAAAAAAGTTCAAAAAT
CCAAAGCTATTCTCAAAAAATTCCTAAATTAATTTTCAATTATTAAATTT
TTTGAAAAAAAATTCATAAAAAATTCAACTTTTTTGGAAAAAAAATCAAA
AATCCACAATGTTCACAAAAAATTTTAATAATTATATTTTGAATATAAAA
ATTACAAAAATATTTCAAATAATACATTTTTTGGAGAAAAATTTCAAAAA
TTCGTAGCTATTCACAACAAATAAAAAATTTTCGAAAAAAAATTGAAAAA
TATATTACATTTTTAGAAAAAAAAATCCAATATTAAATTTTCTAGTACAT
AGCAAATATTCCTTTTTTTTGGGGGGGGGGGGGGATCCAGCACACATCCT
TGCATACGCCCCTGAGTATAAAATATGGGTAATACCATAAATATTTAAAA
AAAAAAAAGAAAGAAGAATTGGACACCAAATGTCACAGATTATGAACAAA
TGATAACTAAGGCTTAGGGATGTGAAAATTGTCCTAATCCTCGTGAGCAT
ATATTTAAAAAATAATTATATGTAGATATGTTGTCTATCAAAGTTGCCAA
CATATGATTGTATTTGAGCTTTACACTCACTAGTGTGTAGACAATTTTCT
CATCTTTGCTAATGTTTTATACGAGGTCTGATATAAAAGAAACTGTTATT
TTCTAATTCAATTTTCATTTCTTTATCATTGAAAAAAAAAATTATGTTTG
ATACATTACATGGAGGGTTGAAGCCCAAATTATTATTAGTTATAATTTCA
TCCAAAATGGTGACATTGCTTATCACGATAGTTAACATTTGTATTAAATT
AATAACAAATTGTTTCTGTATAATTAATTCAAAATTGCTGAGGAGAAGAT
AAGTCAAATTCTTTTAACTTTATGTTACGACCATTAAATAAAAGATTTAC
AAAATAGAACATGATTACATGATTGATTAACCCCACCATAATAAGATTAT
TGAAAAAATTCATTTCCATACACTGTTCAAAATAAGCTGAACAAGAACAC
ACTATGTTCAGATTACTCAATTTTTGAAATTTGGCCAGATAGGACTTTTA
ACTCTTAAGCTGCGATATATATGCTATTGGTTGAATCTATTCAAATACTT
AACATACTATTGTTGGATTTAGTCCTAAGATTGTCATTATTTTTATTGGA
TCGAACTAATTCGGCCAAAAAAAGAAAAAAAATCAATCGAGATCTTTCCC
AGAAAAAATTGGTCTCATCTAAAATTCTGTCTATGTATACAGTATTTTTT
CTATAACAAGGACGGCCAACCTTTTAATATAATGGACTGCATTGCCACTA
GAAATATTTTAATGGGCCACAGAACCTATTAAATTAAATTTAATGAAAAA
TGGATTCATAAAACAAAACTAATCAAATTTTTCAAGGCCAATTTGGAAAC
CCTGCTCATGTGTGTACGCAGGATTATATATATATATACAAGCTATATTG
TGACAATTTTGCTAAAAAAATACTACTTGAATTGATAATGAGTGGTGGGT
AGCTATAAAACATTAAGCGGCCACGGGTTGGACATCCCTGTTCTCGAACA
TATCGTGTATTTTTTCAATTTTCAAGAAAATCCAAGTATTTATAATCTAT
GTAAGATCATTGTCTAAATTAATGAAAACAAATGAAATGAAATGATTGTT
GATCGAAAAATTGCTCTAGAAAAAATCAATTAATACCGAACCGGGAAATA
ATCGAAACTGGACAGAGTCTCAACACTAATACAACTAGTCAGTAGTTTTT
ACACAATGTGTATTTGAACGCAATCCGTCAAATATCGCAACTGTCTCTAG
TCGTTTGGAACGGTTGCAGCTGTTAAGAAAAATGAGATTTGAGTCAGAAA
TTAAGAATACTAGACTAAATATATATATATTTATTTAGAATTTGAAGGTA
CTGAATGATTATTAACTATAATTGTATGATATCAGATTATGATATGAAAA
AATATATAATATACCTAGATCAAATAAATTCATTTTCACAACCNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGATTTTTGCATA
TATTTGTCATTGATATGCGTTCCTATCGAGGGGGAGGGAATTATATCTGC
ATATCCTTTAAGCTCATAAACTACATAGACACACTTCTATTTAATATATG
TTGCTAGTCAACACAAAAACAAGATGATAGGATTTTTCTCAAAAGTGATC
ATGTATTAGGTACATACCTTAAGATTTTTTATTAATAAATTATATTGATG
AATCATTCGGAAGCGCTTATCAGTGTAAATTACGTAGTGTGGGCAGTGTC
CTGGGATAGAAGACGTCTATCCTTTGTAATAATAATAAACTACCTTAAAA
AATTAGAAAAAGAAAAACGGTTGTTGCCCGTGCTCTTTCTTCTTTTTTGT
TCATTTTAGAAACAAAGACGAGAGAAAAAGAAAAAAAGAAAATATATTAT
TGTTCTATTTGTTATAACAATCAACCTCATGTCTCAAACTGTATAAATAA
ATTATTTCAAGCTTCATGGACACTAGATGACTCGTAGTATACACGTATTG
CGTGAGGAATTTCAAAAAACGGACATTCAAGGGAGTCCTCCGAGCAAATC
TTTTTTCTTTTTCTCTCTCTTTGTTTCTCTCTCTTTTCTTTTCTCTCTCT
TTTCTTTTTCTCTGTCTTTGTTTCTATCTCTTTTCTTCTTCTCTGTCTTT
GTTTCTATCTCTTCTAGCTGGGCATACGAATACTAATGCACTTTAATTAT
GAGATCAATTCAAAAATGAGTTTTTTCCTTGAAATATTGTCGTGGCCTTA
TCTCAAATTGACAACGGTATATAGTGTTTTTGGCAAAGTTGTTTTTTTAA
ATTAAAGTTCATTTTTTTAGCTATCCAATTAAATACTTTTATACTTTTTG
AATCTATTCGTCTTGAAGCTATGAGCCTCTGAATAAAAAGCACCTATTTT
CCACTTTAAACAAAGATAACTTGAGTTATAAGTAAGATGTAGACATTTTA
AAAATGTTTTTATAATTTTTTAACATTCGTCTTTATAATATATTAATATA
ATATATCCCTATCTTCAACGCCCAGGGCTTAAAATCGCTTTGAACCTTAA
AAATAGCTAAAAATAACAAAAAAATGGATGGCCTTTTTCTGAAGGCTATG
AGAGACAAAATAAGGATATCAAACTCTATTAAATAAAGCATATACTGTTT
TTGTACCATTTTTGCTGTTGGACATTGTAATTACAATTTTCCCTGGACTG
ATGCTATTTTAAATGTAGAAAGTTCTCCTATTTATAGCAGCAATTTATTT
TCTCTCTCCAAAGTCTTTTAAAAGGCAGCTAGTATTTATAAGGGTCTTAC
TTCAGGTGTACCATAAGTCTCACTCTCTCCTTCCGCTCTTTTTTCATTAC
AAACTACTCAGTTTTAAATCTATATCATGGAGCAAATATATAGAGTGCAC
CCTGTATACACGTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGATGCTATATGCACAGGCCTGCAATAGTTCATTAATACAAATGTAT
TGTTATTTCTTAGATCAAAATATGTATATGATATYTATCAGAGAGCACTA
TATAGAGTGTACCCCGTGACTCGTTTTCATACATACAAASAAACTTTGTT
TGATTAATATAGAAGATTATAGGTCAAGTAAAAAGTTCTGAGGGTTATTA
GCTTTATTTTGACAATATAATTAAAATAAATAATGACATTCCTATYCCGG
TCCAACTCGACGATTTCCGTTATTTTTTGACATTTTCGATGATTGGCCTG
CCAGATCGTACCCCATCTTTGACGTCCATATTACCAGAAGGGAATCCTTG
GAACCANTCGCTTTCCTGTTGCATTCGATACTGTATTGGTTCCATAAACA
GCACTTTTTTTTTTGGCCGTTTTGATAAAGAAGAATGTATCGAATTTTNT
CTTTTTTAATTTCCATTTTGGAACGCTGTAAACTGGCTTCTCCAAACACA
GAACTGTAAATGAACTTTTATAAAGTTTTATACAATGTATTAATCGTGAG
ATTGAGGTCACTATGTCACAGCGAAAAGCACTCAGAACTTTTATTTGTCC
TAATATTATTACCAGTTATCAACTGAGCAACGTTTAATCGTCTTTTATCT
CTCTTTTAGTTATTTTACGATTTGGTGCGTCAAATAGCATGCCGCATGCC
AGAAAATCAACCAAAAAGGAATAAAAGAAAAAAATGCATCATTTTGTAA
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