EMLSAT00000012828, EMLSAT00000012828-708675 (mRNA) Lepeophtheirus salmonis

Overview
NameEMLSAT00000012828
Unique NameEMLSAT00000012828-708675
TypemRNA
OrganismLepeophtheirus salmonis (salmon louse)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
LSalAtl2s979supercontigLSalAtl2s979:4..5108 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
ensembl2013-09-26 .965016
Properties
Property NameValue
Logic nameensemblgenomes
Biotypeprotein_coding
EvidenceIEA
Cross References
External references for this mRNA
DatabaseAccession
Ensembl Metazoa (transcript)EMLSAT00000012828 (primary cross-reference)
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
EMLSAG00000012828EMLSAG00000012828-695594Lepeophtheirus salmonisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
EMLSAE00000057609EMLSAE00000057609-766537Lepeophtheirus salmonisexon
EMLSAE00000057610EMLSAE00000057610-766538Lepeophtheirus salmonisexon
EMLSAE00000057611EMLSAE00000057611-766539Lepeophtheirus salmonisexon
EMLSAE00000057612EMLSAE00000057612-766540Lepeophtheirus salmonisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto767752auto767752Lepeophtheirus salmonispolypeptide
EMLSAP00000012828EMLSAP00000012828Lepeophtheirus salmonispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of EMLSAP00000012828

>EMLSAP00000012828 ID=EMLSAP00000012828|Name=EMLSAP00000012828|organism=Lepeophtheirus salmonis|type=polypeptide|length=350bp
MDSTTKTMPHCPVKSKITLGEISVVHYESLDDEKEATSTTTHSTKTTTSI
QQQQPFVSSVYLNCPDGYVRDASPTEDDEPYYYDVPSDLDKIRLINPKSK
HSSVWSFVDVCLNNNNNEKDVPKEEIETTQGSEEEDHRLYLCPILIDDNT
HSDSISSCSTNYNNNHYYYYIPLKEETMSAVIGIHDFENEPIPTFKFKEP
IHSLTARSVPRHFREGLKKGLTHFTDKNIKIPGSDSTIHSRNYGNSEEDY
YDDDEESSHVIYDSKKKYQSSSVSSNNNTMESTRTPSPEHVGIPASRVRL
TPKKRSDVTTTYCYTSDESTNNELYEHKTHHPPPSARRKQIIQQRLQNQI
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mRNA from alignment at LSalAtl2s979:4..5108+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>EMLSAT00000012828-708675 ID=EMLSAT00000012828-708675|Name=EMLSAT00000012828|organism=Lepeophtheirus salmonis|type=mRNA|length=5105bp|location=Sequence derived from alignment at LSalAtl2s979:4..5108+ (Lepeophtheirus salmonis)
GTAATTTTCATTTTTGAATAATTCCCTTCGTCATCTCTTTCACTCCATAT
TTTTTGTAATCATAAAAAAGATACTAACTCTAACCATAACGTCCTCGACC
ATGGATTCAACTACAAAAACGATGCCTCATTGCCCTGTAAAGTCAAAAAT
AACTTTGGGAGAGATCTCTGTCGTACACTACGAATCCTTGGACGATGAAA
AAGAAGCCACCTCCACAACAACTCACTCTACTAAAACAACAACTTCCATA
CAACAGCAACAGCCCTTTGTAAGCTCAGTCTATTTGAACTGTCCGGATGG
ATACGTCCGCGACGCTAGTCCTACTGAAGATGATGAACCCTACTATTATG
ATGTTCCATCTGATTTAGATAAAATACGACTCATCAATCCCAAGTCAAAA
CATTCCAGTGTTTGGAGTTTTGTGGATGTGTGCCTTAATAATAATAATAA
TGAGAAAGATGTACCTAAAGAAGAGATTGAGACGACTCAAGGATCTGAAG
AAGAGGACCATCGTCTCTATCTCTGTCCAATACTAATCGATGATAATACT
CACTCAGATTCCATTTCTTCTTGTTCCACTAATTATAACAATAATCATTA
TTATTACTATATTCCATTAAAGGAGGAGACGATGTCGGCCGTGATAGGGA
TTCATGACTTTGAAAATGAACCGGTACACATAACATTGTACTCTCTAATT
TGAACTCAGTATAAGGGAGCACAAAAAATTCCCAACAAATTCATATCATC
TTTGTAGGTAAGTTTTTACATCCATTGGACGTGTGATCACTAAACCCGTT
TGATTTTCAACTTTTTTTGAATTTGGATTCGAGTAGTTCGGAAAAGTTGT
GATATAGTATGAAAATTACATATGCAAAATTGCATTTATCTATGATGTCA
TCTTTAGAAGTAGTACATCTTGTTTTGTTCAAAGTTTGAAAGTAGACATA
AGTTCTTTATTTCGCTAATAAGGATTAAAATAAAGCATGAATCATTATTT
TGTATTGATTATTTATGATAGACATTATTCTACTATATAAAAAACTTAAA
TAAAGTTTTTATTCTAAAGCTACACTATGGAGCAAAAAGATGTAGAAAAA
AGAGGCGGGCTATGCGTGGATCATCTAATTTTCTGGGTTGTTTTTTTTTT
GCTCCATAGGACAATTTTAGAAAAAAAAACACTTTATATAGGTTAAAAAA
ATGTCTATCAAAATTATTTATTATGAAATAATGAAAAATTTCCTTTTAGT
ATCTATATTGAGGAATTAAAGAGTTCTTGCCTTTTTTTCATAATTTGATC
GAGATGTGCTACCTAAAGATGACCACGTAGGACACTGCAATTTTGAAAAG
GTCATTTTCATACAATATGACAACATTTCCGCACTAGCAATAATCAAAAT
TCGAAAATAGTTGAAAATCAAACCGGTCTAGTGTACAGGTCTGAACGACC
TGTATACTTTTGAAATGAAGCAATGGACGCCTTATTGCTAAGAACTCTGC
TTACCTTGTATTATAATCTTCAAACTTTAACAATTATACTCCTTTTTAAT
ATAAAGAGGTTATATTATAAGTTTAAAAAATGTGTTAAATGCCATGAAAT
CATGTAAACACGTTAGTCTCATCAAATTTGAAAAAAAACAAACATATTCT
CTATTGTTCTGTTTGCCAACTGTTAATGATTATTGAAAGAATCGACATTA
ATTATCCTATACATACATTTAAATGATAATCTTATCAATGACTGAGTATG
AAATGACTCAGTTTCTAATCGAAGTTCCTATATTTATATAAATCAAATTG
AATACATATACAAATCTTATCTCGTACACTTTTTTAGCTCATTGAGCTCA
TACAAAATACCATTCATGAAAATAAACTAAAACAGCGGAAAGGAAAATAC
ATTACATCTCTGTTTAATTTCAAAAAGCTGATTGTGAGTAACTCACGAAG
TTAGCTTTTTTGGACTATACAAAGATATTTGTATTTTCCCTTCAGTTATT
TTTGTTTGTTAACTCTTTTTGATTAAAAGTACTTACATAATTATGAATTT
AGAAGAATATTAATTCATCTCAACTTGCCCGAATATACCTTAACAGGTCA
CGTACAAAGTATGTACGTATTTTTTTGGCATATTTTGTCCCTCTATCATA
TTTGCATTCAGTAGAATTAATCTATTTACTTGATTAATTCTTGTGTTAAA
TGTTGTTCAGCCCTTATTTAGGACTGAATACTGCAGTCCTGTTCAGTTTA
TGTCCTTTCCAGTTCAGTCCTGCATTTCTTCTTTTTTAAACAGCTTTAGT
ATTGACAGTCCAAAGGATCAGTACCAAGGACTGATAGGGCCGGTCATAAG
ACTTGACTGGACCGAATAAACAAGAAACGAYACAACCCTACTTATGTTCG
CAATTTTTCCTCATCTTTTTGAAAAGAAAGATTGGGAGTGGAGAAAAAAA
GCTCGTTGTAAATTATCCCAAAGATATCATTCATCGTGACATTTTTACTC
TTACTAACGAAAAACCTTTTTTAAAGGATTGAACCTAATGGTTGATCCGT
CTAAAAAATGAAAAGACACGAAGTCCTATCAGGCTGGTCCTAGTAAAATT
TATCAGTCCTAATACCGCTCCTTCTTGATCTTTTGTGGTAACTACAACAA
CTAAAATGACAGCTGTCATTAGCTGTAGAAGTTATTTTATTATCTCTTTC
AAAAAATAAAAAGGATGGCTAGAACCGTGACCGACTAATTGGACACTGGC
GGCTTTTTGAAATAAACAAAGACATACTGTATTTTCACTTCAGCTGTTTT
CATCAAAGTTGACTCTGGTATGATTAAAAGCAGTTGGCGCTAAGTTTATG
AACTCAAAAAAAGTTTATAAATAGGATTAGGATTTATATCAATCAAGGAC
CTCCATTTAGATTGATGTCATTTCATACTCTGGCATTGATACTTATTTTG
ACAATTAATCAATTCATTTTATCTAACAGCTAATAGCTAACAGTTGGTAA
CAATAAAAATACAGAATTCTAGCTACCATGTGCACATATTTTTGAATAAA
ATAGGAGAAAAAGACCAACTCGTTTTTCAGCTGTTGACTAATACATAAAT
ACTTCAATCTACTTGGTTTATTTATTACATAGGTATAAGATAAAATATCA
GCTGACAGTTGACTCTCCCTTTCTTTTCCTATTGAGTATCCAGTTATTAT
ACAGGTCGGTAGTCTTCACAAACGTTAAAAATTGAATCATAATTGAAGGC
AACACCATCTTGGGAGCTATGAATAAGGAATAATTATTGTTGAAGGTCCG
ACGGATCGGTCCTTAGGACTGTTGAATGGTAAAAAAGATCTTACCGATAA
AAAAGACTGAAAGGGAGGGGGAATGATTTCCTAGGCCGATCCAACACTAG
TTCAACCTCTTCATATTAAAAAAGGATCTTTATTGAGGTTTGAAGATTAT
ACATAATATTCAGAGTTCTTTTACATAAATGGTCCATTCCACAGTCATAC
GCGTATTGACGTTCTGTACACGTGCAAAAGATGTAGAAATTTACTTTATC
TCCCAAAAATTCCATAAACAATGATGTATTACGAATCCAAACTATGTACT
TCAATTCAATACATGTCAACCTATATAAATCTCTCTCTATCTCCTTATAA
ATACTTATCTTCTATTTTAGATACCGACGTTTAAATTCAAAGAACCAGTA
CGTTTATTCGTCTAATTCACTATTTACTTTTATTTACCTCTTTTTTGAAC
TATCATTACTTACTTACACAATTTTTCTTCATTTTCTGTTCTATATTTTG
TTTCGTTTTTCACTTACACTGAATGTGTAGAGTGCCCATGGTGTAGGGTC
TCTATTTGGTAGTTTTAACCCTTTTAACAAATTATATGGGCTATGGTTGC
ACCATATTGTATGTGTTCAAAAAATAAAAACTGAACATTATTTTATATTA
ATATAACATCAACAACATTTTTATTTTTTGAATTTATTTTTTTTAATGCA
AGGTGTATTACTACAAAACCTGAACCAAATGTAAAGATGTTTTTCCATAG
ATTTTTTTATTATGTTTTTTTTGTGGCTAMTTTTYATKATGCTCNTTTTC
TTATTTTTTTTAGATTCACAGTTTGACGGCACGCAGTGTTCCAAGGCACT
TCAGAGAGGTAAATATATACGATATTTTTACAACGACCGGGGTTCTAGAA
CCAATTATCATGTGGGTTATATATTGATGAAACCATAATAACGCCACTTT
TTATAATATTTTTCGAAAAGTTCCGGTTCTTATGACGACAGAACTTCTCA
AACTGTGGGAGACGTCAAAGGCGGCACTGAAAGATTTTGAGCAAGTATCG
TTTTTACTGAAAGTGAAAATACTATTCAGTATAAATAGCACGATATACAG
CGAACAAAAAGATTTTTTTAATATGACTACAGTGTTATTTCTTATATCAA
AGTTCGAATATCTATATTTTTTTAAATCCAAAAATCACAAAAAAAAGTAA
ATATGGAAGATTTTTCATAAATTAAAAGGATCATTTCTAATTTCAGGGCT
TAAAAAAAGGTCTAACTCACTTTACTGACAAGAACATAAAGATTCCCGGC
TCTGATTCCACTATCCATAGTAGAAACTACGGCAACTCCGAGGAGGACTA
CTATGACGACGATGAAGAGTCATCCCATGTCATATACGACTCCAAGAAGA
AGTATCAGAGTAGCAGTGTGAGTAGTAATAACAACACTATGGAGAGTACA
CGCACACCCAGTCCTGAGCACGTAGGTATTCCAGCATCTCGAGTCCGACT
CACGCCGAAGAAGCGATCAGACGTAACGACCACATACTGCTACACTTCAG
ATGAAAGTACGAACAATGAATTATATGAGCATAAAACCCATCATCCTCCT
CCATCAGCTCGCCGGAAGCAAATTATTCAACAACGACTTCAAAATCAGAT
TTGAAATCATTTTTTATCATTACTAAAGTTTATCATTAATTGTTTCATCT
TTTTTTAATTACTATTATAATTTTAGAATTGTTTTAAAAATATTATTATT
TTTGTAATATTTTATAAGTCATACTTTATGTTTTAGTTCTTATGTATAAA
ATTTA
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